version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2739 61.85 -1 2974626..2975435 - 269 87200765 - Saro_2752 - hypothetical protein 2740 54.81 -2 2976145..2976456 - 103 87200766 - Saro_2753 - hypothetical protein 2741 55.91 -2 2976637..2976915 - 92 87200767 - Saro_2754 - hypothetical protein 2742 57.66 -2 2977208..2977540 - 110 87200768 - Saro_2755 - hypothetical protein 2743 66.19 0 2977809..2978849 - 346 87200769 - Saro_2756 - hypothetical protein 2744 58.53 -2 2979133..2979390 - 85 87200770 - Saro_2757 - hypothetical protein 2745 62.31 0 2979464..2979853 - 129 87200771 - Saro_2758 - IS4 family transposase 2746 62.93 0 2979874..2980221 - 115 87200772 - Saro_2759 - IS5 family transposase 2747 57.58 -2 2980247..2980576 - 109 87200773 - Saro_2760 - hypothetical protein 2748 56.67 -2 2980950..2981309 - 119 87200774 - Saro_2761 - hypothetical protein 2749 64.73 0 2981469..2982089 + 206 87200775 - Saro_2762 - glutathione S-transferase-like 2750 65.19 0 2982157..2984184 + 675 87200776 - Saro_2763 - oxidoreductase FAD/NAD(P)-binding 2751 64.52 0 2984217..2984681 + 154 87200777 - Saro_2764 - hypothetical protein 2752 64.25 0 2984834..2985742 + 302 87200778 - Saro_2765 - LysR family transcriptional regulator 2753 61.90 -1 2985817..2986299 - 160 87200779 - Saro_2766 - hypothetical protein 2754 61.99 -1 2986394..2987377 - 327 87200780 - Saro_2767 - short-chain dehydrogenase/reductase SDR 2755 64.44 0 2987418..2988449 - 343 87200781 - Saro_2768 - alcohol dehydrogenase 2756 62.47 0 2988513..2989418 + 301 87200782 - Saro_2769 - LysR family transcriptional regulator 2757 67.57 0 2989657..2990319 + 220 87200783 - Saro_2770 - extensin-like 2758 67.47 0 2990334..2990954 - 206 87200784 - Saro_2771 - two component LuxR family transcriptional regulator 2759 61.18 -1 2991231..2991995 - 254 87200785 - Saro_2772 - 20S proteasome, A and B subunits 2760 66.17 0 2992078..2992890 - 270 87200786 - Saro_2773 - transglutaminase-like 2761 63.08 0 2992899..2993846 - 315 87200787 - Saro_2774 - hypothetical protein 2762 63.81 0 2993846..2995279 - 477 87200788 - Saro_2775 - hypothetical protein 2763 67.34 0 2995464..2997527 + 687 87200789 - Saro_2776 - molydopterin dinucleotide-binding region 2764 62.38 0 2997589..2998008 + 139 87200790 - Saro_2777 - hypothetical protein 2765 69.88 +1 2998012..2998821 - 269 87200791 - Saro_2778 - hypothetical protein 2766 62.84 0 2998916..2999464 - 182 87200792 - Saro_2779 - hypothetical protein 2767 65.24 0 2999521..3001764 + 747 87200793 - Saro_2780 - excinuclease ABC subunit B 2768 69.89 +1 3001869..3002333 + 154 87200794 - Saro_2781 - hypothetical protein 2769 68.56 +1 3002334..3002915 - 193 87200795 - Saro_2782 - hypothetical protein 2770 65.93 0 3002951..3004435 - 494 87200796 - Saro_2783 - polysaccharide biosynthesis protein 2771 68.98 +1 3004428..3005423 - 331 87200797 - Saro_2784 - glycerol-3-phosphate dehydrogenase (NAD(P)+) 2772 68.00 0 3005420..3006472 - 350 87200798 - Saro_2785 - O-sialoglycoprotein endopeptidase 2773 70.07 +1 3006518..3007456 + 312 87200799 - Saro_2786 - porphobilinogen deaminase 2774 68.14 0 3007453..3008133 + 226 87200800 - Saro_2787 - uroporphyrinogen-III synthase 2775 71.16 +1 3008163..3009053 + 296 87200801 - Saro_2788 - hypothetical protein 2776 66.67 0 3009076..3010296 - 406 87200802 - Saro_2789 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 2777 67.14 0 3010293..3011990 - 565 87200803 - Saro_2790 - type I phosphodiesterase/nucleotide pyrophosphatase 2778 70.06 +1 3012112..3014172 + 686 87200804 - Saro_2791 - cytochrome c biogenesis protein, transmembrane region 2779 67.70 0 3014182..3014955 - 257 87200805 - Saro_2792 - short-chain dehydrogenase/reductase SDR 2780 65.35 0 3015091..3017376 - 761 87200806 - Saro_2793 - DNA topoisomerase IV subunit A 2781 62.40 0 3017505..3018956 - 483 87200807 - Saro_2794 - hypothetical protein 2782 67.88 0 3019067..3020224 - 385 87200808 - Saro_2795 - iron-containing alcohol dehydrogenase 2783 66.37 0 3020291..3020623 - 110 87200809 - Saro_2796 - ferredoxin 2784 69.71 +1 3020625..3021707 - 360 87200810 - Saro_2797 - aminotransferase, class V 2785 67.81 0 3021704..3022750 - 348 87200811 - Saro_2798 - aminotransferase, class V 2786 66.06 0 3022879..3023535 + 218 87200812 - Saro_2799 - hydrolase 2787 66.07 0 3023603..3024439 - 278 87200813 - Saro_2800 - short-chain dehydrogenase/reductase SDR 2788 66.05 0 3024456..3025925 - 489 87200814 - Saro_2801 - aldehyde dehydrogenase 2789 62.94 0 3025940..3026341 - 133 87200815 - Saro_2802 - hypothetical protein 2790 63.86 0 3026531..3028921 - 796 87200816 - Saro_2803 - TonB-dependent receptor 2791 69.57 +1 3029036..3029587 + 183 87200817 - Saro_2804 - MarR family transcriptional regulator 2792 63.66 0 3029605..3030336 - 243 87200818 - Saro_2805 - hypothetical protein 2793 68.17 0 3030486..3031349 + 287 87200819 - Saro_2806 - dienelactone hydrolase 2794 59.38 -1 3031475..3031831 - 118 87200820 - Saro_2807 - excinuclease ABC subunit C 2795 67.86 0 3032114..3033031 - 305 87200821 - Saro_2808 - NmrA-like 2796 65.93 0 3033028..3034521 - 497 87200822 - Saro_2809 - carotenoid oxygenase 2797 68.06 0 3034579..3035367 - 262 87200823 - Saro_2810 - hypothetical protein 2798 64.13 0 3035500..3036444 - 314 87200824 - Saro_2811 - oxidoreductase-like 2799 63.35 0 3036468..3037310 - 280 87200825 - Saro_2812 - protocatechuate 4,5-dioxygenase subunit beta 2800 61.42 -1 3037312..3037749 - 145 87200826 - Saro_2813 - protocatechuate 4,5-dioxygenase subunit alpha 2801 64.23 0 3037746..3038771 - 341 87200827 - Saro_2814 - amidohydrolase 2 2802 67.99 0 3038768..3039601 - 277 87200828 - Saro_2815 - 6-phosphogluconate dehydrogenase, NAD-binding 2803 71.88 +2 3039664..3040815 - 383 87200829 - Saro_2816 - LysR family transcriptional regulator 2804 66.53 0 3040856..3041596 + 246 87200830 - Saro_2817 - hypothetical protein 2805 66.86 0 3041744..3042802 + 352 87200831 - Saro_2818 - methylitaconate delta2-delta3-isomerase 2806 67.12 0 3042799..3043689 + 296 87200832 - Saro_2819 - amidohydrolase 2 2807 68.05 0 3043698..3044132 + 144 87200833 - Saro_2820 - hypothetical protein 2808 68.70 +1 3044321..3046384 + 687 87200834 - Saro_2821 - methyl-accepting chemotaxis sensory transducer 2809 67.83 0 3046435..3046779 + 114 87200835 - Saro_2822 - TonB-like 2810 67.38 0 3046851..3048119 - 422 87200836 - Saro_2823 - amidohydrolase 2811 66.90 0 3048765..3051344 - 859 87200837 - Saro_2824 - AAA ATPase, central region 2812 67.65 0 3051535..3053154 - 539 87200838 - Saro_2825 - peptidase M28 2813 68.14 0 3053366..3056224 + 952 87200839 - Saro_2826 - peptidase M16-like 2814 63.97 0 3056332..3056628 + 98 87200840 - Saro_2827 - hypothetical protein 2815 56.30 -2 3056672..3057211 - 179 87200841 - Saro_2828 - hypothetical protein 2816 53.52 -2 3057306..3057845 - 179 87200842 - Saro_2829 - hypothetical protein 2817 55.63 -2 3057855..3058298 - 147 87200843 - Saro_2830 - hypothetical protein 2818 65.33 0 3058378..3059871 - 497 87200844 gatB Saro_2831 - aspartyl/glutamyl-tRNA amidotransferase subunit B 2819 68.69 +1 3059873..3061357 - 494 87200845 gatA Saro_2832 - aspartyl/glutamyl-tRNA amidotransferase subunit A 2820 67.00 0 3061357..3061659 - 100 87200846 - Saro_2833 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C 2821 65.96 0 3061771..3062334 - 187 87200847 - Saro_2834 - peptidylprolyl isomerase, FKBP-type 2822 60.39 -1 3062508..3062714 - 68 87200848 rpsU Saro_2835 - 30S ribosomal protein S21 2823 67.67 0 3062901..3063299 + 132 87200849 - Saro_2836 - camphor resistance protein CrcB 2824 70.94 +1 3063296..3064606 + 436 87200850 - Saro_2837 - ribosomal large subunit pseudouridine synthase C 2825 68.49 0 3064606..3065208 + 200 87200851 - Saro_2838 - negative transcriptional regulator 2826 67.73 0 3065219..3065875 + 218 87200852 - Saro_2839 - HAD family hydrolase 2827 68.91 +1 3065872..3066138 + 88 87200853 - Saro_2840 - hypothetical protein 2828 67.82 0 3066140..3066832 + 230 87200854 - Saro_2841 - ATP12 ATPase 2829 68.41 0 3066845..3067417 - 190 87200855 - Saro_2842 - hypothetical protein 2830 65.52 0 3067432..3068391 - 319 87200856 - Saro_2843 - hypothetical protein 2831 67.11 0 3068402..3069304 - 300 87200857 - Saro_2844 - ABC transporter related 2832 65.59 0 3069304..3070422 - 372 87200858 - Saro_2845 - hypothetical protein 2833 65.23 0 3070572..3073286 + 904 87200859 - Saro_2846 - valyl-tRNA synthetase 2834 68.01 0 3073305..3074048 + 247 87200860 - Saro_2847 - radical SAM family protein 2835 67.57 0 3074150..3074701 - 183 87200861 - Saro_2848 - single-strand binding protein 2836 67.69 0 3074799..3076655 - 618 87200862 - Saro_2849 - ferrous iron transport protein B 2837 70.16 +1 3076652..3076909 - 85 87200863 - Saro_2850 - hypothetical protein 2838 68.04 0 3076998..3077651 - 217 87200864 - Saro_2851 - RpsU-divergently transcribed 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.