version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2556 66.07 0 2773551..2774900 - 449 87200582 - Saro_2569 - coproporphyrinogen III oxidase 2557 65.86 0 2774890..2775138 - 82 87200583 - Saro_2570 - hypothetical protein 2558 62.67 0 2775135..2775284 - 49 87200584 - Saro_2571 - cytochrome oxidase maturation protein, cbb3-type 2559 68.88 +1 2775281..2777404 - 707 87200585 - Saro_2572 - heavy metal translocating P-type ATPase 2560 66.45 0 2777401..2777871 - 156 87200586 - Saro_2573 - integral membrane protein linked to a cation pump-like 2561 64.90 0 2777868..2779337 - 489 87200587 - Saro_2574 - 4Fe-4S ferredoxin, iron-sulfur binding 2562 68.94 +1 2779359..2780282 - 307 87200588 - Saro_2575 - cytochrome c oxidase, cbb3-type, subunit III 2563 61.99 -1 2780275..2780445 - 56 87200589 - Saro_2576 - Cbb3-type cytochrome oxidase component 2564 64.40 0 2780442..2781191 - 249 87200590 - Saro_2577 - cytochrome c oxidase, cbb3-type, subunit II 2565 63.75 0 2781217..2782863 - 548 87200591 - Saro_2578 - cytochrome c oxidase, cbb3-type, subunit I 2566 63.32 0 2783100..2783786 + 228 87200592 - Saro_2579 - OmpW 2567 65.06 0 2784084..2786504 + 806 87200593 - Saro_2580 - TonB-dependent receptor 2568 65.09 0 2786581..2787276 - 231 87200594 - Saro_2581 - Crp/FNR family transcriptional regulator 2569 64.42 0 2787539..2788027 - 162 87200595 - Saro_2582 - flavin reductase-like, FMN-binding 2570 66.34 0 2788082..2788993 - 303 87200596 - Saro_2583 - hypothetical protein 2571 71.80 +2 2789231..2791003 + 590 87200597 - Saro_2584 - DEAD/DEAH box helicase-like 2572 62.02 -1 2791267..2791524 - 85 87200598 - Saro_2585 - translation initiation factor 1 2573 59.42 -1 2791529..2791735 - 68 87200599 - Saro_2586 - cold-shock DNA-binding protein family protein 2574 63.42 0 2791974..2793791 - 605 87200600 - Saro_2587 - GTP-binding protein LepA 2575 66.74 0 2794095..2795537 + 480 87200601 - Saro_2588 - phosphate-selective porin O and P 2576 67.26 0 2795589..2796605 - 338 87200602 - Saro_2589 - hypothetical protein 2577 72.27 +2 2796840..2797214 + 124 87200603 - Saro_2590 - 17 kDa surface antigen 2578 65.31 0 2797271..2799415 - 714 87200604 - Saro_2591 - dipeptidyl-peptidase 7 2579 65.65 0 2799463..2800737 + 424 87200605 - Saro_2592 - cyclopropane-fatty-acyl-phospholipid synthase 2580 68.71 +1 2800825..2802342 + 505 87200606 - Saro_2593 - propionyl-CoA carboxylase 2581 68.19 0 2802353..2803405 - 350 87200607 - Saro_2594 - hypothetical protein 2582 63.44 0 2803495..2804361 + 288 87200608 - Saro_2595 - putative glutathione S-transferase YghU 2583 62.98 0 2804790..2805413 + 207 87200609 - Saro_2596 - hypothetical protein 2584 64.67 0 2805478..2806278 - 266 87200610 - Saro_2597 - acetoacetate decarboxylase 2585 63.97 0 2806423..2807313 + 296 87200611 - Saro_2598 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2586 67.65 0 2807327..2808745 + 472 87200612 - Saro_2599 - aldehyde dehydrogenase 2587 66.38 0 2808811..2809866 + 351 87200613 - Saro_2600 - AraC family transcriptional regulator 2588 64.26 0 2809891..2812260 - 789 87200614 - Saro_2601 - TonB-dependent receptor 2589 67.36 0 2812382..2813683 - 433 87200615 - Saro_2602 - 4-aminobutyrate aminotransferase 2590 66.45 0 2813680..2815092 - 470 87200616 - Saro_2603 - succinate semialdehyde dehydrogenase 2591 66.10 0 2815108..2816343 - 411 87200617 - Saro_2604 - major facilitator transporter 2592 66.67 0 2816589..2817617 + 342 87200618 - Saro_2605 - AraC family transcriptional regulator 2593 65.60 0 2817653..2818495 + 280 87200619 - Saro_2606 - glutamine amidotransferase class-I 2594 63.69 0 2818565..2819437 - 290 87200620 - Saro_2607 - extradiol ring-cleavage dioxygenase III subunit B 2595 64.30 0 2819584..2820849 + 421 87200621 - Saro_2608 - cytochrome P450 family protein 2596 66.14 0 2820902..2822227 + 441 87200622 - Saro_2609 - glutamate--ammonia ligase 2597 65.91 0 2822235..2823695 + 486 87200623 - Saro_2610 - betaine-aldehyde dehydrogenase 2598 66.04 0 2823727..2824686 - 319 87200624 - Saro_2611 - AraC family transcriptional regulator 2599 66.50 0 2824855..2827278 + 807 87200625 - Saro_2612 - TonB-dependent receptor 2600 63.35 0 2827306..2828118 + 270 87200626 - Saro_2613 - alpha/beta hydrolase 2601 67.91 0 2828193..2828594 + 133 87200627 - Saro_2614 - globin 2602 64.66 0 2828659..2829504 - 281 87200628 - Saro_2615 - hypothetical protein 2603 67.71 0 2829738..2831276 - 512 87200629 - Saro_2616 - sulphate transporter 2604 65.80 0 2831273..2831965 - 230 87200630 - Saro_2617 - carbonate dehydratase 2605 66.97 0 2832091..2833401 - 436 87200631 - Saro_2618 - periplasmic sensor signal transduction histidine kinase 2606 66.80 0 2833398..2834120 - 240 87200632 - Saro_2619 - two component transcriptional regulator 2607 69.76 +1 2834191..2835159 - 322 87200633 - Saro_2620 - hypothetical protein 2608 61.90 -1 2835202..2835537 - 111 87200634 - Saro_2621 - hypothetical protein 2609 66.56 0 2835569..2837497 - 642 87200635 - Saro_2622 - AMP-dependent synthetase and ligase 2610 63.18 0 2837522..2839213 - 563 87200636 - Saro_2623 - general substrate transporter 2611 66.53 0 2839239..2840651 - 470 87200637 - Saro_2624 - hypothetical protein 2612 64.77 0 2840827..2842776 + 649 87200638 - Saro_2625 - acetyl-coenzyme A synthetase 2613 65.38 0 2842798..2843421 + 207 87200639 - Saro_2626 - two component LuxR family transcriptional regulator 2614 65.50 0 2843398..2846748 - 1116 87200640 - Saro_2627 - multi-sensor hybrid histidine kinase 2615 64.77 0 2864556..2865608 + 350 87200641 - Saro_2628 - glycosyl transferase family protein 2616 66.01 0 2865605..2867119 + 504 87200642 - Saro_2629 - polysaccharide biosynthesis protein 2617 64.10 0 2867173..2868108 + 311 87200643 - Saro_2630 - putative peptidase A2A 2618 64.53 0 2868163..2869989 + 608 87200644 - Saro_2631 - ABC transporter related 2619 62.69 0 2870055..2870255 - 66 87200645 - Saro_2632 - hypothetical protein 2620 65.41 0 2870264..2870740 - 158 87200646 - Saro_2633 - GCN5-related N-acetyltransferase 2621 64.82 0 2870737..2872038 - 433 87200647 hslU Saro_2634 - ATP-dependent protease ATP-binding subunit 2622 64.52 0 2872135..2872692 - 185 87200648 - Saro_2635 - ATP-dependent protease peptidase subunit 2623 65.66 0 2872738..2873232 - 164 87200649 - Saro_2636 - SmpA/OmlA 2624 64.74 0 2873435..2873953 + 172 87200650 - Saro_2637 - hypothetical protein 2625 63.57 0 2873950..2874465 + 171 87200651 - Saro_2638 - hypothetical protein 2626 66.80 0 2874470..2875915 + 481 87200652 - Saro_2639 - MATE efflux family protein 2627 61.99 -1 2875964..2877673 - 569 87200653 - Saro_2640 - hypothetical protein 2628 62.55 0 2877773..2878525 - 250 87200654 - Saro_2641 - hypothetical protein 2629 64.81 0 2878522..2879436 - 304 87200655 - Saro_2642 - hypothetical protein 2630 68.83 +1 2879513..2880529 - 338 87200656 - Saro_2643 - hypothetical protein 2631 66.46 0 2880616..2882082 - 488 87200657 - Saro_2644 - bacteriophage N4 adsorption protein B 2632 68.37 0 2882210..2883382 + 390 87200658 - Saro_2645 - Na+/H+ antiporter NhaA 2633 63.82 0 2883484..2883939 + 151 87200659 - Saro_2646 - Ferritin and Dps 2634 66.80 0 2883943..2884677 - 244 87200660 - Saro_2647 - type II secretion system protein N 2635 68.54 +1 2884674..2885153 - 159 87200661 - Saro_2648 - hypothetical protein 2636 68.54 +1 2885150..2886268 - 372 87200662 - Saro_2649 - general secretion pathway L 2637 63.46 0 2886278..2886745 - 155 87200663 - Saro_2650 - general secretion pathway protein G 2638 66.75 0 2886748..2887977 - 409 87200664 - Saro_2651 - general secretion pathway protein F 2639 68.31 0 2887977..2889494 - 505 87200665 - Saro_2652 - type II secretion system protein E 2640 66.09 0 2889499..2891745 - 748 87200666 - Saro_2653 - type II and III secretion system protein 2641 68.57 +1 2891742..2892581 - 279 87200667 - Saro_2654 - type II secretion system protein C 2642 65.43 0 2892766..2893251 + 161 87200668 - Saro_2655 - NUDIX hydrolase 2643 66.67 0 2893230..2894366 - 378 87200669 - Saro_2656 - DNA polymerase IV 2644 65.73 0 2894432..2895709 + 425 87200670 - Saro_2657 - Bcr/CflA subfamily drug resistance transporter 2645 66.67 0 2895710..2897635 - 641 87200671 - Saro_2658 - diguanylate cyclase/phosphodiesterase 2646 68.80 +1 2897751..2898548 - 265 87200672 - Saro_2659 - LysR family transcriptional regulator 2647 62.86 0 2898561..2898980 - 139 87200673 apaG Saro_2660 - ApaG 2648 70.11 +1 2899056..2899664 + 202 87200674 - Saro_2661 - recombinational DNA repair protein (RecF pathway)-like 2649 66.49 0 2899661..2900770 + 369 87200675 - Saro_2662 - 3-isopropylmalate dehydrogenase 2650 65.95 0 2900783..2901904 + 373 87200676 - Saro_2663 - dolichyl-phosphate beta-D-mannosyltransferase 2651 65.53 0 2901927..2903246 - 439 87200677 - Saro_2664 - glycosyl transferase family protein 2652 66.25 0 2903330..2904538 + 402 87200678 - Saro_2665 - cystathionine gamma-synthase 2653 66.37 0 2904622..2905962 + 446 87200679 - Saro_2666 - signal transduction histidine kinase 2654 67.46 0 2905959..2906210 - 83 87200680 - Saro_2667 - hypothetical protein 2655 63.96 0 2906274..2906828 - 184 87200681 - Saro_2668 - TspO and MBR like proteins 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0