version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2529 64.88 0 2745439..2747283 + 614 87200555 - Saro_2542 - GTP-binding protein TypA 2530 66.51 0 2747347..2747997 - 216 87200556 - Saro_2543 - hypothetical protein 2531 69.07 +1 2748173..2749378 + 401 87200557 - Saro_2544 - glycosyl transferase, group 1 2532 66.67 0 2749375..2749923 - 182 87200558 - Saro_2545 - hypothetical protein 2533 70.23 +1 2749923..2750567 - 214 87200559 - Saro_2546 - PadR family transcriptional regulator 2534 67.84 0 2750630..2751988 + 452 87200560 - Saro_2547 - recombination factor protein RarA 2535 70.45 +1 2751985..2752857 + 290 87200561 - Saro_2548 - hypothetical protein 2536 57.00 -2 2753007..2753306 - 99 87200562 - Saro_2549 - hypothetical protein 2537 66.24 0 2753448..2753918 + 156 87200563 - Saro_2550 - MarR family transcriptional regulator 2538 61.48 -1 2753941..2754441 - 166 87200564 - Saro_2551 - 7-cyano-7-deazaguanine reductase 2539 72.31 +2 2754579..2755766 + 395 87200565 - Saro_2552 - hypothetical protein 2540 65.98 0 2755872..2756741 + 289 87200566 - Saro_2553 - 3-mercaptopyruvate sulfurtransferase 2541 69.34 +1 2756814..2758046 + 410 87200567 - Saro_2554 - cystathionine beta-lyase 2542 63.56 0 2758043..2759008 + 321 87200568 - Saro_2555 - MscS mechanosensitive ion channel 2543 67.19 0 2759238..2760008 + 256 87200569 - Saro_2556 - uroporphyrinogen-III C-methyltransferase 2544 67.68 0 2760005..2760301 + 98 87200570 - Saro_2557 - hypothetical protein 2545 64.40 0 2760303..2761937 + 544 87200571 - Saro_2558 - nitrite and sulphite reductase 4Fe-4S region 2546 68.29 0 2761930..2762361 + 143 87200572 - Saro_2559 - hypothetical protein 2547 65.44 0 2762385..2763197 + 270 87200573 - Saro_2560 - phosphoadenosine phosphosulfate reductase 2548 67.95 0 2763327..2764727 + 466 87200574 - Saro_2561 - anion transporter 2549 64.73 0 2764917..2765588 + 223 87200575 - Saro_2562 - hypothetical protein 2550 62.15 0 2765588..2766340 + 250 87200576 - Saro_2563 - hypothetical protein 2551 69.92 +1 2766342..2767694 + 450 87200577 - Saro_2564 - TPR repeat-containing protein 2552 69.21 +1 2767633..2768811 + 392 87200578 - Saro_2565 - putative transmembrane protein 2553 66.12 0 2768850..2769950 + 366 87200579 - Saro_2566 - TrkA-N 2554 67.71 0 2770011..2772794 - 927 87200580 - Saro_2567 - phosphoenolpyruvate carboxylase 2555 67.15 0 2772819..2773433 - 204 87200581 - Saro_2568 - 2-keto-3-deoxy-phosphogluconate aldolase 2556 66.07 0 2773551..2774900 - 449 87200582 - Saro_2569 - coproporphyrinogen III oxidase 2557 65.86 0 2774890..2775138 - 82 87200583 - Saro_2570 - hypothetical protein 2558 62.67 0 2775135..2775284 - 49 87200584 - Saro_2571 - cytochrome oxidase maturation protein, cbb3-type 2559 68.88 +1 2775281..2777404 - 707 87200585 - Saro_2572 - heavy metal translocating P-type ATPase 2560 66.45 0 2777401..2777871 - 156 87200586 - Saro_2573 - integral membrane protein linked to a cation pump-like 2561 64.90 0 2777868..2779337 - 489 87200587 - Saro_2574 - 4Fe-4S ferredoxin, iron-sulfur binding 2562 68.94 +1 2779359..2780282 - 307 87200588 - Saro_2575 - cytochrome c oxidase, cbb3-type, subunit III 2563 61.99 -1 2780275..2780445 - 56 87200589 - Saro_2576 - Cbb3-type cytochrome oxidase component 2564 64.40 0 2780442..2781191 - 249 87200590 - Saro_2577 - cytochrome c oxidase, cbb3-type, subunit II 2565 63.75 0 2781217..2782863 - 548 87200591 - Saro_2578 - cytochrome c oxidase, cbb3-type, subunit I 2566 63.32 0 2783100..2783786 + 228 87200592 - Saro_2579 - OmpW 2567 65.06 0 2784084..2786504 + 806 87200593 - Saro_2580 - TonB-dependent receptor 2568 65.09 0 2786581..2787276 - 231 87200594 - Saro_2581 - Crp/FNR family transcriptional regulator 2569 64.42 0 2787539..2788027 - 162 87200595 - Saro_2582 - flavin reductase-like, FMN-binding 2570 66.34 0 2788082..2788993 - 303 87200596 - Saro_2583 - hypothetical protein 2571 71.80 +2 2789231..2791003 + 590 87200597 - Saro_2584 - DEAD/DEAH box helicase-like 2572 62.02 -1 2791267..2791524 - 85 87200598 - Saro_2585 - translation initiation factor 1 2573 59.42 -1 2791529..2791735 - 68 87200599 - Saro_2586 - cold-shock DNA-binding protein family protein 2574 63.42 0 2791974..2793791 - 605 87200600 - Saro_2587 - GTP-binding protein LepA 2575 66.74 0 2794095..2795537 + 480 87200601 - Saro_2588 - phosphate-selective porin O and P 2576 67.26 0 2795589..2796605 - 338 87200602 - Saro_2589 - hypothetical protein 2577 72.27 +2 2796840..2797214 + 124 87200603 - Saro_2590 - 17 kDa surface antigen 2578 65.31 0 2797271..2799415 - 714 87200604 - Saro_2591 - dipeptidyl-peptidase 7 2579 65.65 0 2799463..2800737 + 424 87200605 - Saro_2592 - cyclopropane-fatty-acyl-phospholipid synthase 2580 68.71 +1 2800825..2802342 + 505 87200606 - Saro_2593 - propionyl-CoA carboxylase 2581 68.19 0 2802353..2803405 - 350 87200607 - Saro_2594 - hypothetical protein 2582 63.44 0 2803495..2804361 + 288 87200608 - Saro_2595 - putative glutathione S-transferase YghU 2583 62.98 0 2804790..2805413 + 207 87200609 - Saro_2596 - hypothetical protein 2584 64.67 0 2805478..2806278 - 266 87200610 - Saro_2597 - acetoacetate decarboxylase 2585 63.97 0 2806423..2807313 + 296 87200611 - Saro_2598 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2586 67.65 0 2807327..2808745 + 472 87200612 - Saro_2599 - aldehyde dehydrogenase 2587 66.38 0 2808811..2809866 + 351 87200613 - Saro_2600 - AraC family transcriptional regulator 2588 64.26 0 2809891..2812260 - 789 87200614 - Saro_2601 - TonB-dependent receptor 2589 67.36 0 2812382..2813683 - 433 87200615 - Saro_2602 - 4-aminobutyrate aminotransferase 2590 66.45 0 2813680..2815092 - 470 87200616 - Saro_2603 - succinate semialdehyde dehydrogenase 2591 66.10 0 2815108..2816343 - 411 87200617 - Saro_2604 - major facilitator transporter 2592 66.67 0 2816589..2817617 + 342 87200618 - Saro_2605 - AraC family transcriptional regulator 2593 65.60 0 2817653..2818495 + 280 87200619 - Saro_2606 - glutamine amidotransferase class-I 2594 63.69 0 2818565..2819437 - 290 87200620 - Saro_2607 - extradiol ring-cleavage dioxygenase III subunit B 2595 64.30 0 2819584..2820849 + 421 87200621 - Saro_2608 - cytochrome P450 family protein 2596 66.14 0 2820902..2822227 + 441 87200622 - Saro_2609 - glutamate--ammonia ligase 2597 65.91 0 2822235..2823695 + 486 87200623 - Saro_2610 - betaine-aldehyde dehydrogenase 2598 66.04 0 2823727..2824686 - 319 87200624 - Saro_2611 - AraC family transcriptional regulator 2599 66.50 0 2824855..2827278 + 807 87200625 - Saro_2612 - TonB-dependent receptor 2600 63.35 0 2827306..2828118 + 270 87200626 - Saro_2613 - alpha/beta hydrolase 2601 67.91 0 2828193..2828594 + 133 87200627 - Saro_2614 - globin 2602 64.66 0 2828659..2829504 - 281 87200628 - Saro_2615 - hypothetical protein 2603 67.71 0 2829738..2831276 - 512 87200629 - Saro_2616 - sulphate transporter 2604 65.80 0 2831273..2831965 - 230 87200630 - Saro_2617 - carbonate dehydratase 2605 66.97 0 2832091..2833401 - 436 87200631 - Saro_2618 - periplasmic sensor signal transduction histidine kinase 2606 66.80 0 2833398..2834120 - 240 87200632 - Saro_2619 - two component transcriptional regulator 2607 69.76 +1 2834191..2835159 - 322 87200633 - Saro_2620 - hypothetical protein 2608 61.90 -1 2835202..2835537 - 111 87200634 - Saro_2621 - hypothetical protein 2609 66.56 0 2835569..2837497 - 642 87200635 - Saro_2622 - AMP-dependent synthetase and ligase 2610 63.18 0 2837522..2839213 - 563 87200636 - Saro_2623 - general substrate transporter 2611 66.53 0 2839239..2840651 - 470 87200637 - Saro_2624 - hypothetical protein 2612 64.77 0 2840827..2842776 + 649 87200638 - Saro_2625 - acetyl-coenzyme A synthetase 2613 65.38 0 2842798..2843421 + 207 87200639 - Saro_2626 - two component LuxR family transcriptional regulator 2614 65.50 0 2843398..2846748 - 1116 87200640 - Saro_2627 - multi-sensor hybrid histidine kinase 2615 64.77 0 2864556..2865608 + 350 87200641 - Saro_2628 - glycosyl transferase family protein 2616 66.01 0 2865605..2867119 + 504 87200642 - Saro_2629 - polysaccharide biosynthesis protein 2617 64.10 0 2867173..2868108 + 311 87200643 - Saro_2630 - putative peptidase A2A 2618 64.53 0 2868163..2869989 + 608 87200644 - Saro_2631 - ABC transporter related 2619 62.69 0 2870055..2870255 - 66 87200645 - Saro_2632 - hypothetical protein 2620 65.41 0 2870264..2870740 - 158 87200646 - Saro_2633 - GCN5-related N-acetyltransferase 2621 64.82 0 2870737..2872038 - 433 87200647 hslU Saro_2634 - ATP-dependent protease ATP-binding subunit 2622 64.52 0 2872135..2872692 - 185 87200648 - Saro_2635 - ATP-dependent protease peptidase subunit 2623 65.66 0 2872738..2873232 - 164 87200649 - Saro_2636 - SmpA/OmlA 2624 64.74 0 2873435..2873953 + 172 87200650 - Saro_2637 - hypothetical protein 2625 63.57 0 2873950..2874465 + 171 87200651 - Saro_2638 - hypothetical protein 2626 66.80 0 2874470..2875915 + 481 87200652 - Saro_2639 - MATE efflux family protein 2627 61.99 -1 2875964..2877673 - 569 87200653 - Saro_2640 - hypothetical protein 2628 62.55 0 2877773..2878525 - 250 87200654 - Saro_2641 - hypothetical protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0