version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2481 56.99 -2 2695545..2695916 - 123 87200507 - Saro_2494 - hypothetical protein 2482 65.33 0 2696022..2696246 + 74 87200508 - Saro_2495 - phage shock protein C, PspC 2483 61.71 -1 2696315..2697040 - 241 87200509 - Saro_2496 - hypothetical protein 2484 62.46 0 2697274..2697939 - 221 87200510 - Saro_2497 - TadE-like 2485 61.51 -1 2697939..2698520 - 193 87200511 - Saro_2498 - TadE-like 2486 58.23 -2 2698517..2700412 - 631 87200512 - Saro_2499 - hypothetical protein 2487 60.76 -1 2700925..2702313 + 462 87200513 - Saro_2500 - hypothetical protein 2488 64.54 0 2702379..2703551 - 390 87200514 - Saro_2501 - L-carnitine dehydratase/bile acid-inducible protein F 2489 66.99 0 2703561..2705093 - 510 87200515 - Saro_2502 - acetyl-CoA acetyltransferase 2490 63.46 0 2705109..2706542 - 477 87200516 - Saro_2503 - aldehyde dehydrogenase 2491 65.59 0 2706568..2707683 - 371 87200517 - Saro_2504 - alcohol dehydrogenase, zinc-containing 2492 67.49 0 2707680..2709611 - 643 87200518 - Saro_2505 - hypothetical protein 2493 70.27 +1 2709608..2709940 - 110 87200519 - Saro_2506 - hypothetical protein 2494 65.09 0 2710035..2710988 + 317 87200520 - Saro_2507 - LysR family transcriptional regulator 2495 66.76 0 2710971..2712032 - 353 87200521 - Saro_2508 - AraC family transcriptional regulator 2496 64.78 0 2712217..2714607 + 796 87200522 - Saro_2509 - TonB-dependent receptor 2497 67.07 0 2714727..2715464 + 245 87200523 - Saro_2510 - short-chain dehydrogenase/reductase SDR 2498 64.30 0 2715476..2716702 + 408 87200524 - Saro_2511 - acyl-CoA dehydrogenase-like 2499 67.53 0 2716714..2717754 + 346 87200525 - Saro_2512 - alcohol dehydrogenase 2500 66.15 0 2717729..2718886 - 385 87200526 - Saro_2513 - aminotransferase 2501 65.08 0 2718951..2719328 + 125 87200527 - Saro_2514 - ModE family transcriptional regulator 2502 69.24 +1 2719619..2720899 - 426 87200528 - Saro_2515 - amidohydrolase 2503 67.09 0 2720987..2721454 - 155 87200529 - Saro_2516 - hypothetical protein 2504 66.67 0 2721511..2721837 - 108 87200530 - Saro_2517 - hypothetical protein 2505 65.78 0 2721893..2722678 - 261 87200531 - Saro_2518 - NUDIX hydrolase 2506 58.18 -2 2722991..2723320 - 109 87200532 - Saro_2519 - glutaredoxin-like protein 2507 67.52 0 2723345..2723578 - 77 87200533 - Saro_2520 - BolA-like protein 2508 65.43 0 2723578..2723901 - 107 87200534 - Saro_2521 - hypothetical protein 2509 67.20 0 2724014..2724580 - 188 87200535 - Saro_2522 - hypothetical protein 2510 66.84 0 2724740..2725330 - 196 87200536 - Saro_2523 - hypothetical protein 2511 68.07 0 2725475..2727619 - 714 87200537 - Saro_2524 - prolyl oligopeptidase 2512 67.51 0 2727747..2729882 - 711 87200538 - Saro_2525 - prolyl oligopeptidase 2513 65.49 0 2730199..2730624 - 141 87200539 rplQ Saro_2526 - 50S ribosomal protein L17 2514 61.21 -1 2730746..2731807 - 353 87200540 - Saro_2527 - DNA-directed RNA polymerase subunit alpha 2515 65.90 0 2731923..2732312 - 129 87200541 - Saro_2528 - 30S ribosomal protein S11 2516 60.98 -1 2732361..2732729 - 122 87200542 rpsM Saro_2529 - 30S ribosomal protein S13 2517 68.42 0 2733048..2733446 - 132 87200543 - Saro_2530 - hexapaptide repeat-containing transferase 2518 66.67 0 2733515..2734054 + 179 87200544 - Saro_2531 - hexapaptide repeat-containing transferase 2519 67.62 0 2734123..2734542 + 139 87200545 - Saro_2532 - hypothetical protein 2520 65.52 0 2734524..2736611 - 695 87200546 - Saro_2533 - (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA 2521 70.54 +1 2736748..2737959 + 403 87200547 - Saro_2534 - hypothetical protein 2522 68.42 0 2737946..2738572 - 208 87200548 - Saro_2535 - GCN5-related N-acetyltransferase 2523 64.93 0 2738577..2739440 - 287 87200549 - Saro_2536 - coproporphyrinogen III oxidase 2524 69.33 +1 2739485..2740159 + 224 87200550 - Saro_2537 - ICC-like phosphoesterases-like 2525 58.81 -2 2740284..2740805 + 173 87200551 infC Saro_2538 - translation initiation factor IF-3 2526 67.67 0 2741051..2741350 + 99 87200552 - Saro_2539 - hypothetical protein 2527 66.79 0 2741432..2742238 + 268 87200553 - Saro_2540 - hypothetical protein 2528 65.25 0 2742309..2744999 - 896 87200554 - Saro_2541 - TonB-dependent receptor 2529 64.88 0 2745439..2747283 + 614 87200555 - Saro_2542 - GTP-binding protein TypA 2530 66.51 0 2747347..2747997 - 216 87200556 - Saro_2543 - hypothetical protein 2531 69.07 +1 2748173..2749378 + 401 87200557 - Saro_2544 - glycosyl transferase, group 1 2532 66.67 0 2749375..2749923 - 182 87200558 - Saro_2545 - hypothetical protein 2533 70.23 +1 2749923..2750567 - 214 87200559 - Saro_2546 - PadR family transcriptional regulator 2534 67.84 0 2750630..2751988 + 452 87200560 - Saro_2547 - recombination factor protein RarA 2535 70.45 +1 2751985..2752857 + 290 87200561 - Saro_2548 - hypothetical protein 2536 57.00 -2 2753007..2753306 - 99 87200562 - Saro_2549 - hypothetical protein 2537 66.24 0 2753448..2753918 + 156 87200563 - Saro_2550 - MarR family transcriptional regulator 2538 61.48 -1 2753941..2754441 - 166 87200564 - Saro_2551 - 7-cyano-7-deazaguanine reductase 2539 72.31 +2 2754579..2755766 + 395 87200565 - Saro_2552 - hypothetical protein 2540 65.98 0 2755872..2756741 + 289 87200566 - Saro_2553 - 3-mercaptopyruvate sulfurtransferase 2541 69.34 +1 2756814..2758046 + 410 87200567 - Saro_2554 - cystathionine beta-lyase 2542 63.56 0 2758043..2759008 + 321 87200568 - Saro_2555 - MscS mechanosensitive ion channel 2543 67.19 0 2759238..2760008 + 256 87200569 - Saro_2556 - uroporphyrinogen-III C-methyltransferase 2544 67.68 0 2760005..2760301 + 98 87200570 - Saro_2557 - hypothetical protein 2545 64.40 0 2760303..2761937 + 544 87200571 - Saro_2558 - nitrite and sulphite reductase 4Fe-4S region 2546 68.29 0 2761930..2762361 + 143 87200572 - Saro_2559 - hypothetical protein 2547 65.44 0 2762385..2763197 + 270 87200573 - Saro_2560 - phosphoadenosine phosphosulfate reductase 2548 67.95 0 2763327..2764727 + 466 87200574 - Saro_2561 - anion transporter 2549 64.73 0 2764917..2765588 + 223 87200575 - Saro_2562 - hypothetical protein 2550 62.15 0 2765588..2766340 + 250 87200576 - Saro_2563 - hypothetical protein 2551 69.92 +1 2766342..2767694 + 450 87200577 - Saro_2564 - TPR repeat-containing protein 2552 69.21 +1 2767633..2768811 + 392 87200578 - Saro_2565 - putative transmembrane protein 2553 66.12 0 2768850..2769950 + 366 87200579 - Saro_2566 - TrkA-N 2554 67.71 0 2770011..2772794 - 927 87200580 - Saro_2567 - phosphoenolpyruvate carboxylase 2555 67.15 0 2772819..2773433 - 204 87200581 - Saro_2568 - 2-keto-3-deoxy-phosphogluconate aldolase 2556 66.07 0 2773551..2774900 - 449 87200582 - Saro_2569 - coproporphyrinogen III oxidase 2557 65.86 0 2774890..2775138 - 82 87200583 - Saro_2570 - hypothetical protein 2558 62.67 0 2775135..2775284 - 49 87200584 - Saro_2571 - cytochrome oxidase maturation protein, cbb3-type 2559 68.88 +1 2775281..2777404 - 707 87200585 - Saro_2572 - heavy metal translocating P-type ATPase 2560 66.45 0 2777401..2777871 - 156 87200586 - Saro_2573 - integral membrane protein linked to a cation pump-like 2561 64.90 0 2777868..2779337 - 489 87200587 - Saro_2574 - 4Fe-4S ferredoxin, iron-sulfur binding 2562 68.94 +1 2779359..2780282 - 307 87200588 - Saro_2575 - cytochrome c oxidase, cbb3-type, subunit III 2563 61.99 -1 2780275..2780445 - 56 87200589 - Saro_2576 - Cbb3-type cytochrome oxidase component 2564 64.40 0 2780442..2781191 - 249 87200590 - Saro_2577 - cytochrome c oxidase, cbb3-type, subunit II 2565 63.75 0 2781217..2782863 - 548 87200591 - Saro_2578 - cytochrome c oxidase, cbb3-type, subunit I 2566 63.32 0 2783100..2783786 + 228 87200592 - Saro_2579 - OmpW 2567 65.06 0 2784084..2786504 + 806 87200593 - Saro_2580 - TonB-dependent receptor 2568 65.09 0 2786581..2787276 - 231 87200594 - Saro_2581 - Crp/FNR family transcriptional regulator 2569 64.42 0 2787539..2788027 - 162 87200595 - Saro_2582 - flavin reductase-like, FMN-binding 2570 66.34 0 2788082..2788993 - 303 87200596 - Saro_2583 - hypothetical protein 2571 71.80 +2 2789231..2791003 + 590 87200597 - Saro_2584 - DEAD/DEAH box helicase-like 2572 62.02 -1 2791267..2791524 - 85 87200598 - Saro_2585 - translation initiation factor 1 2573 59.42 -1 2791529..2791735 - 68 87200599 - Saro_2586 - cold-shock DNA-binding protein family protein 2574 63.42 0 2791974..2793791 - 605 87200600 - Saro_2587 - GTP-binding protein LepA 2575 66.74 0 2794095..2795537 + 480 87200601 - Saro_2588 - phosphate-selective porin O and P 2576 67.26 0 2795589..2796605 - 338 87200602 - Saro_2589 - hypothetical protein 2577 72.27 +2 2796840..2797214 + 124 87200603 - Saro_2590 - 17 kDa surface antigen 2578 65.31 0 2797271..2799415 - 714 87200604 - Saro_2591 - dipeptidyl-peptidase 7 2579 65.65 0 2799463..2800737 + 424 87200605 - Saro_2592 - cyclopropane-fatty-acyl-phospholipid synthase 2580 68.71 +1 2800825..2802342 + 505 87200606 - Saro_2593 - propionyl-CoA carboxylase 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0