version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2443 67.32 0 2647738..2648964 + 408 87200469 - Saro_2456 - L-carnitine dehydratase/bile acid-inducible protein F 2444 63.13 0 2648961..2649866 - 301 87200470 - Saro_2457 - beta-lactamase-like 2445 60.87 -1 2649885..2652161 - 758 87200471 - Saro_2458 - TonB-dependent receptor 2446 65.08 0 2652414..2653736 - 440 87200472 - Saro_2459 - hypothetical protein 2447 64.38 0 2653733..2656573 - 946 87200473 - Saro_2460 - hypothetical protein 2448 62.75 0 2656664..2657428 - 254 87200474 - Saro_2461 - phosphoesterase, PA-phosphatase related 2449 65.08 0 2657679..2658371 + 230 87200475 - Saro_2462 - hypothetical protein 2450 63.66 0 2658391..2659686 - 431 87200476 - Saro_2463 - fumarylacetoacetate hydrolase 2451 61.02 -1 2659717..2660265 - 182 87200477 - Saro_2464 - glyoxalase/bleomycin resistance protein/dioxygenase 2452 64.10 0 2660381..2661277 + 298 87200478 - Saro_2465 - LysR family transcriptional regulator 2453 55.97 -2 2661639..2662601 + 320 87200479 - Saro_2466 - phosphoesterase, PA-phosphatase related 2454 59.32 -1 2662662..2663654 + 330 87200480 - Saro_2467 - homocysteine S-methyltransferase 2455 58.85 -2 2663813..2664580 - 255 87200481 - Saro_2468 - TetR family transcriptional regulator 2456 62.48 0 2664741..2667272 + 843 87200482 - Saro_2469 - TonB-dependent receptor 2457 63.41 0 2667360..2669720 + 786 87200483 - Saro_2470 - sulfatase 2458 61.96 -1 2669717..2671183 + 488 87200484 - Saro_2471 - hypothetical protein 2459 63.97 0 2671180..2672589 + 469 87200485 - Saro_2472 - hypothetical protein 2460 62.26 0 2672670..2673440 + 256 87200486 - Saro_2473 - short-chain dehydrogenase/reductase SDR 2461 62.49 0 2673478..2674410 + 310 87200487 - Saro_2474 - hypothetical protein 2462 67.80 0 2674487..2677045 - 852 87200488 - Saro_2475 - hypothetical protein 2463 67.17 0 2677081..2678460 - 459 87200489 - Saro_2476 - NADH/ubiquinone/plastoquinone (complex I) 2464 65.98 0 2678583..2679455 + 290 87200490 - Saro_2477 - LysR family transcriptional regulator 2465 63.25 0 2679961..2680341 + 126 87200491 - Saro_2478 - hemimethylated DNA-binding region protein 2466 61.89 -1 2680366..2681244 - 292 87200492 - Saro_2479 - hypothetical protein 2467 72.88 +2 2681359..2682066 + 235 87200493 - Saro_2480 - GcrA cell cycle regulator 2468 64.36 0 2682188..2683312 + 374 87200494 - Saro_2481 - diguanylate cyclase 2469 63.56 0 2683433..2685751 - 772 87200495 - Saro_2482 - polynucleotide phosphorylase/polyadenylase 2470 57.78 -2 2685914..2686183 - 89 87200496 - Saro_2483 - SSU ribosomal protein S15P 2471 64.70 0 2686189..2687103 - 304 87200497 - Saro_2484 - tRNA pseudouridine synthase B 2472 64.83 0 2687106..2687813 - 235 87200498 - Saro_2485 - peptidase M50 2473 67.75 0 2687810..2688364 - 184 87200499 - Saro_2486 - GCN5-related N-acetyltransferase 2474 65.80 0 2688361..2688939 - 192 87200500 - Saro_2487 - thymidine kinase 2475 64.46 0 2688951..2689358 - 135 87200501 rbfA Saro_2488 - ribosome-binding factor A 2476 62.94 0 2689361..2689897 - 178 87200502 - Saro_2489 - hypothetical protein 2477 67.35 0 2690002..2692629 - 875 87200503 infB Saro_2490 - translation initiation factor IF-2 2478 67.07 0 2692635..2693369 - 244 87200504 - Saro_2491 - hypothetical protein 2479 65.50 0 2693350..2694984 - 544 87200505 nusA Saro_2492 - transcription elongation factor NusA 2480 62.21 0 2694988..2695548 - 186 87200506 - Saro_2493 - hypothetical protein 2481 56.99 -2 2695545..2695916 - 123 87200507 - Saro_2494 - hypothetical protein 2482 65.33 0 2696022..2696246 + 74 87200508 - Saro_2495 - phage shock protein C, PspC 2483 61.71 -1 2696315..2697040 - 241 87200509 - Saro_2496 - hypothetical protein 2484 62.46 0 2697274..2697939 - 221 87200510 - Saro_2497 - TadE-like 2485 61.51 -1 2697939..2698520 - 193 87200511 - Saro_2498 - TadE-like 2486 58.23 -2 2698517..2700412 - 631 87200512 - Saro_2499 - hypothetical protein 2487 60.76 -1 2700925..2702313 + 462 87200513 - Saro_2500 - hypothetical protein 2488 64.54 0 2702379..2703551 - 390 87200514 - Saro_2501 - L-carnitine dehydratase/bile acid-inducible protein F 2489 66.99 0 2703561..2705093 - 510 87200515 - Saro_2502 - acetyl-CoA acetyltransferase 2490 63.46 0 2705109..2706542 - 477 87200516 - Saro_2503 - aldehyde dehydrogenase 2491 65.59 0 2706568..2707683 - 371 87200517 - Saro_2504 - alcohol dehydrogenase, zinc-containing 2492 67.49 0 2707680..2709611 - 643 87200518 - Saro_2505 - hypothetical protein 2493 70.27 +1 2709608..2709940 - 110 87200519 - Saro_2506 - hypothetical protein 2494 65.09 0 2710035..2710988 + 317 87200520 - Saro_2507 - LysR family transcriptional regulator 2495 66.76 0 2710971..2712032 - 353 87200521 - Saro_2508 - AraC family transcriptional regulator 2496 64.78 0 2712217..2714607 + 796 87200522 - Saro_2509 - TonB-dependent receptor 2497 67.07 0 2714727..2715464 + 245 87200523 - Saro_2510 - short-chain dehydrogenase/reductase SDR 2498 64.30 0 2715476..2716702 + 408 87200524 - Saro_2511 - acyl-CoA dehydrogenase-like 2499 67.53 0 2716714..2717754 + 346 87200525 - Saro_2512 - alcohol dehydrogenase 2500 66.15 0 2717729..2718886 - 385 87200526 - Saro_2513 - aminotransferase 2501 65.08 0 2718951..2719328 + 125 87200527 - Saro_2514 - ModE family transcriptional regulator 2502 69.24 +1 2719619..2720899 - 426 87200528 - Saro_2515 - amidohydrolase 2503 67.09 0 2720987..2721454 - 155 87200529 - Saro_2516 - hypothetical protein 2504 66.67 0 2721511..2721837 - 108 87200530 - Saro_2517 - hypothetical protein 2505 65.78 0 2721893..2722678 - 261 87200531 - Saro_2518 - NUDIX hydrolase 2506 58.18 -2 2722991..2723320 - 109 87200532 - Saro_2519 - glutaredoxin-like protein 2507 67.52 0 2723345..2723578 - 77 87200533 - Saro_2520 - BolA-like protein 2508 65.43 0 2723578..2723901 - 107 87200534 - Saro_2521 - hypothetical protein 2509 67.20 0 2724014..2724580 - 188 87200535 - Saro_2522 - hypothetical protein 2510 66.84 0 2724740..2725330 - 196 87200536 - Saro_2523 - hypothetical protein 2511 68.07 0 2725475..2727619 - 714 87200537 - Saro_2524 - prolyl oligopeptidase 2512 67.51 0 2727747..2729882 - 711 87200538 - Saro_2525 - prolyl oligopeptidase 2513 65.49 0 2730199..2730624 - 141 87200539 rplQ Saro_2526 - 50S ribosomal protein L17 2514 61.21 -1 2730746..2731807 - 353 87200540 - Saro_2527 - DNA-directed RNA polymerase subunit alpha 2515 65.90 0 2731923..2732312 - 129 87200541 - Saro_2528 - 30S ribosomal protein S11 2516 60.98 -1 2732361..2732729 - 122 87200542 rpsM Saro_2529 - 30S ribosomal protein S13 2517 68.42 0 2733048..2733446 - 132 87200543 - Saro_2530 - hexapaptide repeat-containing transferase 2518 66.67 0 2733515..2734054 + 179 87200544 - Saro_2531 - hexapaptide repeat-containing transferase 2519 67.62 0 2734123..2734542 + 139 87200545 - Saro_2532 - hypothetical protein 2520 65.52 0 2734524..2736611 - 695 87200546 - Saro_2533 - (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA 2521 70.54 +1 2736748..2737959 + 403 87200547 - Saro_2534 - hypothetical protein 2522 68.42 0 2737946..2738572 - 208 87200548 - Saro_2535 - GCN5-related N-acetyltransferase 2523 64.93 0 2738577..2739440 - 287 87200549 - Saro_2536 - coproporphyrinogen III oxidase 2524 69.33 +1 2739485..2740159 + 224 87200550 - Saro_2537 - ICC-like phosphoesterases-like 2525 58.81 -2 2740284..2740805 + 173 87200551 infC Saro_2538 - translation initiation factor IF-3 2526 67.67 0 2741051..2741350 + 99 87200552 - Saro_2539 - hypothetical protein 2527 66.79 0 2741432..2742238 + 268 87200553 - Saro_2540 - hypothetical protein 2528 65.25 0 2742309..2744999 - 896 87200554 - Saro_2541 - TonB-dependent receptor 2529 64.88 0 2745439..2747283 + 614 87200555 - Saro_2542 - GTP-binding protein TypA 2530 66.51 0 2747347..2747997 - 216 87200556 - Saro_2543 - hypothetical protein 2531 69.07 +1 2748173..2749378 + 401 87200557 - Saro_2544 - glycosyl transferase, group 1 2532 66.67 0 2749375..2749923 - 182 87200558 - Saro_2545 - hypothetical protein 2533 70.23 +1 2749923..2750567 - 214 87200559 - Saro_2546 - PadR family transcriptional regulator 2534 67.84 0 2750630..2751988 + 452 87200560 - Saro_2547 - recombination factor protein RarA 2535 70.45 +1 2751985..2752857 + 290 87200561 - Saro_2548 - hypothetical protein 2536 57.00 -2 2753007..2753306 - 99 87200562 - Saro_2549 - hypothetical protein 2537 66.24 0 2753448..2753918 + 156 87200563 - Saro_2550 - MarR family transcriptional regulator 2538 61.48 -1 2753941..2754441 - 166 87200564 - Saro_2551 - 7-cyano-7-deazaguanine reductase 2539 72.31 +2 2754579..2755766 + 395 87200565 - Saro_2552 - hypothetical protein 2540 65.98 0 2755872..2756741 + 289 87200566 - Saro_2553 - 3-mercaptopyruvate sulfurtransferase 2541 69.34 +1 2756814..2758046 + 410 87200567 - Saro_2554 - cystathionine beta-lyase 2542 63.56 0 2758043..2759008 + 321 87200568 - Saro_2555 - MscS mechanosensitive ion channel 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0