version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2408 68.14 0 2600398..2602707 + 769 87200434 - Saro_2421 - alpha-1,2-mannosidase, putative 2409 70.67 +1 2602704..2604977 + 757 87200435 - Saro_2422 - hypothetical protein 2410 68.60 +1 2604974..2606890 + 638 87200436 - Saro_2423 - twin-arginine translocation pathway signal 2411 67.70 0 2606887..2609781 - 964 87200437 - Saro_2424 - beta-galactosidase 2412 70.47 +1 2609778..2610539 - 253 87200438 - Saro_2425 - CutC 2413 66.78 0 2610554..2611399 - 281 87200439 - Saro_2426 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2414 66.38 0 2611396..2611743 - 115 87200440 - Saro_2427 - hypothetical protein 2415 66.05 0 2611746..2613047 - 433 87200441 - Saro_2428 - L-fucose permease 2416 66.53 0 2613078..2613818 - 246 87200442 - Saro_2429 - short-chain dehydrogenase/reductase SDR 2417 67.91 0 2613829..2615037 - 402 87200443 - Saro_2430 - Altronate dehydratase 2418 68.48 0 2615034..2615363 - 109 87200444 - Saro_2431 - D-galactarate dehydratase/Altronate hydrolase-like 2419 68.11 0 2615344..2616177 - 277 87200445 - Saro_2432 - amidohydrolase 2 2420 67.58 0 2616174..2617163 - 329 87200446 - Saro_2433 - aldo/keto reductase 2421 65.57 0 2617282..2618100 - 272 87200447 - Saro_2434 - IclR family transcriptional regulator 2422 66.31 0 2618189..2619034 - 281 87200448 - Saro_2435 - AraC family transcriptional regulator 2423 66.75 0 2619147..2620316 + 389 87200449 - Saro_2436 - 4-hydroxybenzoate 3-monooxygenase 2424 68.30 0 2620391..2621065 + 224 87200450 - Saro_2437 - two component transcriptional regulator 2425 64.54 0 2621275..2623953 - 892 87200451 - Saro_2438 - TonB-dependent receptor 2426 64.65 0 2624046..2625635 - 529 87200452 - Saro_2439 - hypothetical protein 2427 71.58 +1 2625899..2626285 + 128 87200453 - Saro_2440 - TPR repeat-containing protein 2428 68.24 0 2626298..2627761 - 487 87200454 - Saro_2441 - carbohydrate kinase, FGGY 2429 66.80 0 2627754..2629262 - 502 87200455 glpD Saro_2442 - glycerol-3-phosphate dehydrogenase 2430 65.75 0 2629276..2630364 - 362 87200456 - Saro_2443 - alkanesulfonate monooxygenase 2431 66.78 0 2630492..2631406 - 304 87200457 - Saro_2444 - aldo/keto reductase 2432 64.99 0 2631403..2632416 - 337 87200458 - Saro_2445 - LacI family transcription regulator 2433 65.47 0 2632413..2634422 - 669 87200459 - Saro_2446 - alpha-glucosidase 2434 64.67 0 2634603..2636954 + 783 87200460 - Saro_2447 - TonB-dependent receptor 2435 64.96 0 2637286..2638515 - 409 87200461 - Saro_2448 - major facilitator transporter 2436 65.46 0 2638634..2639713 + 359 87200462 - Saro_2449 - hypothetical protein 2437 66.77 0 2639757..2640728 - 323 87200463 - Saro_2450 - alcohol dehydrogenase 2438 63.94 0 2640725..2641969 - 414 87200464 - Saro_2451 - cytochrome P450 2439 65.03 0 2642004..2643956 - 650 87200465 - Saro_2452 - cyclohexanone monooxygenase 2440 63.55 0 2644059..2645693 - 544 87200466 - Saro_2453 - AMP-dependent synthetase and ligase 2441 62.98 0 2645737..2646387 - 216 87200467 - Saro_2454 - TetR family transcriptional regulator 2442 64.89 0 2646384..2647562 - 392 87200468 - Saro_2455 - iron-containing alcohol dehydrogenase 2443 67.32 0 2647738..2648964 + 408 87200469 - Saro_2456 - L-carnitine dehydratase/bile acid-inducible protein F 2444 63.13 0 2648961..2649866 - 301 87200470 - Saro_2457 - beta-lactamase-like 2445 60.87 -1 2649885..2652161 - 758 87200471 - Saro_2458 - TonB-dependent receptor 2446 65.08 0 2652414..2653736 - 440 87200472 - Saro_2459 - hypothetical protein 2447 64.38 0 2653733..2656573 - 946 87200473 - Saro_2460 - hypothetical protein 2448 62.75 0 2656664..2657428 - 254 87200474 - Saro_2461 - phosphoesterase, PA-phosphatase related 2449 65.08 0 2657679..2658371 + 230 87200475 - Saro_2462 - hypothetical protein 2450 63.66 0 2658391..2659686 - 431 87200476 - Saro_2463 - fumarylacetoacetate hydrolase 2451 61.02 -1 2659717..2660265 - 182 87200477 - Saro_2464 - glyoxalase/bleomycin resistance protein/dioxygenase 2452 64.10 0 2660381..2661277 + 298 87200478 - Saro_2465 - LysR family transcriptional regulator 2453 55.97 -2 2661639..2662601 + 320 87200479 - Saro_2466 - phosphoesterase, PA-phosphatase related 2454 59.32 -1 2662662..2663654 + 330 87200480 - Saro_2467 - homocysteine S-methyltransferase 2455 58.85 -2 2663813..2664580 - 255 87200481 - Saro_2468 - TetR family transcriptional regulator 2456 62.48 0 2664741..2667272 + 843 87200482 - Saro_2469 - TonB-dependent receptor 2457 63.41 0 2667360..2669720 + 786 87200483 - Saro_2470 - sulfatase 2458 61.96 -1 2669717..2671183 + 488 87200484 - Saro_2471 - hypothetical protein 2459 63.97 0 2671180..2672589 + 469 87200485 - Saro_2472 - hypothetical protein 2460 62.26 0 2672670..2673440 + 256 87200486 - Saro_2473 - short-chain dehydrogenase/reductase SDR 2461 62.49 0 2673478..2674410 + 310 87200487 - Saro_2474 - hypothetical protein 2462 67.80 0 2674487..2677045 - 852 87200488 - Saro_2475 - hypothetical protein 2463 67.17 0 2677081..2678460 - 459 87200489 - Saro_2476 - NADH/ubiquinone/plastoquinone (complex I) 2464 65.98 0 2678583..2679455 + 290 87200490 - Saro_2477 - LysR family transcriptional regulator 2465 63.25 0 2679961..2680341 + 126 87200491 - Saro_2478 - hemimethylated DNA-binding region protein 2466 61.89 -1 2680366..2681244 - 292 87200492 - Saro_2479 - hypothetical protein 2467 72.88 +2 2681359..2682066 + 235 87200493 - Saro_2480 - GcrA cell cycle regulator 2468 64.36 0 2682188..2683312 + 374 87200494 - Saro_2481 - diguanylate cyclase 2469 63.56 0 2683433..2685751 - 772 87200495 - Saro_2482 - polynucleotide phosphorylase/polyadenylase 2470 57.78 -2 2685914..2686183 - 89 87200496 - Saro_2483 - SSU ribosomal protein S15P 2471 64.70 0 2686189..2687103 - 304 87200497 - Saro_2484 - tRNA pseudouridine synthase B 2472 64.83 0 2687106..2687813 - 235 87200498 - Saro_2485 - peptidase M50 2473 67.75 0 2687810..2688364 - 184 87200499 - Saro_2486 - GCN5-related N-acetyltransferase 2474 65.80 0 2688361..2688939 - 192 87200500 - Saro_2487 - thymidine kinase 2475 64.46 0 2688951..2689358 - 135 87200501 rbfA Saro_2488 - ribosome-binding factor A 2476 62.94 0 2689361..2689897 - 178 87200502 - Saro_2489 - hypothetical protein 2477 67.35 0 2690002..2692629 - 875 87200503 infB Saro_2490 - translation initiation factor IF-2 2478 67.07 0 2692635..2693369 - 244 87200504 - Saro_2491 - hypothetical protein 2479 65.50 0 2693350..2694984 - 544 87200505 nusA Saro_2492 - transcription elongation factor NusA 2480 62.21 0 2694988..2695548 - 186 87200506 - Saro_2493 - hypothetical protein 2481 56.99 -2 2695545..2695916 - 123 87200507 - Saro_2494 - hypothetical protein 2482 65.33 0 2696022..2696246 + 74 87200508 - Saro_2495 - phage shock protein C, PspC 2483 61.71 -1 2696315..2697040 - 241 87200509 - Saro_2496 - hypothetical protein 2484 62.46 0 2697274..2697939 - 221 87200510 - Saro_2497 - TadE-like 2485 61.51 -1 2697939..2698520 - 193 87200511 - Saro_2498 - TadE-like 2486 58.23 -2 2698517..2700412 - 631 87200512 - Saro_2499 - hypothetical protein 2487 60.76 -1 2700925..2702313 + 462 87200513 - Saro_2500 - hypothetical protein 2488 64.54 0 2702379..2703551 - 390 87200514 - Saro_2501 - L-carnitine dehydratase/bile acid-inducible protein F 2489 66.99 0 2703561..2705093 - 510 87200515 - Saro_2502 - acetyl-CoA acetyltransferase 2490 63.46 0 2705109..2706542 - 477 87200516 - Saro_2503 - aldehyde dehydrogenase 2491 65.59 0 2706568..2707683 - 371 87200517 - Saro_2504 - alcohol dehydrogenase, zinc-containing 2492 67.49 0 2707680..2709611 - 643 87200518 - Saro_2505 - hypothetical protein 2493 70.27 +1 2709608..2709940 - 110 87200519 - Saro_2506 - hypothetical protein 2494 65.09 0 2710035..2710988 + 317 87200520 - Saro_2507 - LysR family transcriptional regulator 2495 66.76 0 2710971..2712032 - 353 87200521 - Saro_2508 - AraC family transcriptional regulator 2496 64.78 0 2712217..2714607 + 796 87200522 - Saro_2509 - TonB-dependent receptor 2497 67.07 0 2714727..2715464 + 245 87200523 - Saro_2510 - short-chain dehydrogenase/reductase SDR 2498 64.30 0 2715476..2716702 + 408 87200524 - Saro_2511 - acyl-CoA dehydrogenase-like 2499 67.53 0 2716714..2717754 + 346 87200525 - Saro_2512 - alcohol dehydrogenase 2500 66.15 0 2717729..2718886 - 385 87200526 - Saro_2513 - aminotransferase 2501 65.08 0 2718951..2719328 + 125 87200527 - Saro_2514 - ModE family transcriptional regulator 2502 69.24 +1 2719619..2720899 - 426 87200528 - Saro_2515 - amidohydrolase 2503 67.09 0 2720987..2721454 - 155 87200529 - Saro_2516 - hypothetical protein 2504 66.67 0 2721511..2721837 - 108 87200530 - Saro_2517 - hypothetical protein 2505 65.78 0 2721893..2722678 - 261 87200531 - Saro_2518 - NUDIX hydrolase 2506 58.18 -2 2722991..2723320 - 109 87200532 - Saro_2519 - glutaredoxin-like protein 2507 67.52 0 2723345..2723578 - 77 87200533 - Saro_2520 - BolA-like protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0