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Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2380 69.94 +1 2558451..2560652 + 733 87200406 - Saro_2393 - primosome assembly protein PriA 2381 67.37 0 2560701..2562269 + 522 87200407 - Saro_2394 - deoxyribodipyrimidine photolyase-related protein 2382 67.47 0 2562266..2563135 - 289 87200408 - Saro_2395 - abortive infection protein 2383 69.86 +1 2563138..2564169 - 343 87200409 - Saro_2396 - transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase 2384 65.63 0 2564166..2564648 - 160 87200410 - Saro_2397 - hypothetical protein 2385 68.30 0 2564711..2566306 + 531 87200411 - Saro_2398 - peptidase S1 and S6, chymotrypsin/Hap 2386 64.40 0 2566457..2567029 + 190 87200412 - Saro_2399 - F0F1 ATP synthase subunit delta 2387 64.51 0 2567075..2568604 + 509 87200413 - Saro_2400 - F0F1 ATP synthase subunit alpha 2388 63.34 0 2568929..2569801 + 290 87200414 - Saro_2401 - F0F1 ATP synthase subunit gamma 2389 65.77 0 2569866..2571311 + 481 87200415 - Saro_2402 - F0F1 ATP synthase subunit beta 2390 64.34 0 2571460..2571717 + 85 87200416 - Saro_2403 - F0F1 ATP synthase subunit epsilon 2391 63.35 0 2571954..2573342 + 462 87200417 - Saro_2404 - glycine cleavage T protein (aminomethyl transferase) 2392 64.52 0 2573603..2574442 + 279 87200418 - Saro_2405 - glutathione S-transferase-like 2393 66.27 0 2574470..2575483 - 337 87200419 - Saro_2406 - twin-arginine translocation pathway signal 2394 70.37 +1 2575480..2576235 - 251 87200420 - Saro_2407 - IclR family transcriptional regulator 2395 69.72 +1 2576232..2576624 - 130 87200421 - Saro_2408 - hypothetical protein 2396 66.14 0 2576621..2577754 - 377 87200422 - Saro_2409 - methionine synthase, vitamin-B12 independent 2397 63.43 0 2578324..2581104 + 926 87200423 - Saro_2410 - TonB-dependent receptor 2398 70.02 +1 2581270..2583744 - 824 87200424 - Saro_2411 - twin-arginine translocation pathway signal 2399 69.63 +1 2583756..2585444 - 562 87200425 - Saro_2412 - PTS system, N-acetylglucosamine-specific IIBC component 2400 69.10 +1 2585441..2587951 - 836 87200426 - Saro_2413 - phosphoenolpyruvate--protein phosphotransferase 2401 69.03 +1 2588004..2589146 - 380 87200427 - Saro_2414 - N-acetylglucosamine 6-phosphate deacetylase 2402 67.05 0 2589143..2590183 - 346 87200428 - Saro_2415 - glutamine-fructose-6-phosphate transaminase (isomerizing) 2403 65.32 0 2590210..2590950 - 246 87200429 - Saro_2416 - GntR family transcriptional regulator 2404 67.27 0 2591327..2593792 + 821 87200430 - Saro_2417 - Beta-N-acetylhexosaminidase 2405 68.34 0 2593789..2596416 + 875 87200431 - Saro_2418 - beta-mannosidase 2406 68.78 +1 2596413..2598962 + 849 87200432 - Saro_2419 - Beta-glucosidase 2407 67.43 0 2598959..2600401 + 480 87200433 - Saro_2420 - twin-arginine translocation pathway signal 2408 68.14 0 2600398..2602707 + 769 87200434 - Saro_2421 - alpha-1,2-mannosidase, putative 2409 70.67 +1 2602704..2604977 + 757 87200435 - Saro_2422 - hypothetical protein 2410 68.60 +1 2604974..2606890 + 638 87200436 - Saro_2423 - twin-arginine translocation pathway signal 2411 67.70 0 2606887..2609781 - 964 87200437 - Saro_2424 - beta-galactosidase 2412 70.47 +1 2609778..2610539 - 253 87200438 - Saro_2425 - CutC 2413 66.78 0 2610554..2611399 - 281 87200439 - Saro_2426 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2414 66.38 0 2611396..2611743 - 115 87200440 - Saro_2427 - hypothetical protein 2415 66.05 0 2611746..2613047 - 433 87200441 - Saro_2428 - L-fucose permease 2416 66.53 0 2613078..2613818 - 246 87200442 - Saro_2429 - short-chain dehydrogenase/reductase SDR 2417 67.91 0 2613829..2615037 - 402 87200443 - Saro_2430 - Altronate dehydratase 2418 68.48 0 2615034..2615363 - 109 87200444 - Saro_2431 - D-galactarate dehydratase/Altronate hydrolase-like 2419 68.11 0 2615344..2616177 - 277 87200445 - Saro_2432 - amidohydrolase 2 2420 67.58 0 2616174..2617163 - 329 87200446 - Saro_2433 - aldo/keto reductase 2421 65.57 0 2617282..2618100 - 272 87200447 - Saro_2434 - IclR family transcriptional regulator 2422 66.31 0 2618189..2619034 - 281 87200448 - Saro_2435 - AraC family transcriptional regulator 2423 66.75 0 2619147..2620316 + 389 87200449 - Saro_2436 - 4-hydroxybenzoate 3-monooxygenase 2424 68.30 0 2620391..2621065 + 224 87200450 - Saro_2437 - two component transcriptional regulator 2425 64.54 0 2621275..2623953 - 892 87200451 - Saro_2438 - TonB-dependent receptor 2426 64.65 0 2624046..2625635 - 529 87200452 - Saro_2439 - hypothetical protein 2427 71.58 +1 2625899..2626285 + 128 87200453 - Saro_2440 - TPR repeat-containing protein 2428 68.24 0 2626298..2627761 - 487 87200454 - Saro_2441 - carbohydrate kinase, FGGY 2429 66.80 0 2627754..2629262 - 502 87200455 glpD Saro_2442 - glycerol-3-phosphate dehydrogenase 2430 65.75 0 2629276..2630364 - 362 87200456 - Saro_2443 - alkanesulfonate monooxygenase 2431 66.78 0 2630492..2631406 - 304 87200457 - Saro_2444 - aldo/keto reductase 2432 64.99 0 2631403..2632416 - 337 87200458 - Saro_2445 - LacI family transcription regulator 2433 65.47 0 2632413..2634422 - 669 87200459 - Saro_2446 - alpha-glucosidase 2434 64.67 0 2634603..2636954 + 783 87200460 - Saro_2447 - TonB-dependent receptor 2435 64.96 0 2637286..2638515 - 409 87200461 - Saro_2448 - major facilitator transporter 2436 65.46 0 2638634..2639713 + 359 87200462 - Saro_2449 - hypothetical protein 2437 66.77 0 2639757..2640728 - 323 87200463 - Saro_2450 - alcohol dehydrogenase 2438 63.94 0 2640725..2641969 - 414 87200464 - Saro_2451 - cytochrome P450 2439 65.03 0 2642004..2643956 - 650 87200465 - Saro_2452 - cyclohexanone monooxygenase 2440 63.55 0 2644059..2645693 - 544 87200466 - Saro_2453 - AMP-dependent synthetase and ligase 2441 62.98 0 2645737..2646387 - 216 87200467 - Saro_2454 - TetR family transcriptional regulator 2442 64.89 0 2646384..2647562 - 392 87200468 - Saro_2455 - iron-containing alcohol dehydrogenase 2443 67.32 0 2647738..2648964 + 408 87200469 - Saro_2456 - L-carnitine dehydratase/bile acid-inducible protein F 2444 63.13 0 2648961..2649866 - 301 87200470 - Saro_2457 - beta-lactamase-like 2445 60.87 -1 2649885..2652161 - 758 87200471 - Saro_2458 - TonB-dependent receptor 2446 65.08 0 2652414..2653736 - 440 87200472 - Saro_2459 - hypothetical protein 2447 64.38 0 2653733..2656573 - 946 87200473 - Saro_2460 - hypothetical protein 2448 62.75 0 2656664..2657428 - 254 87200474 - Saro_2461 - phosphoesterase, PA-phosphatase related 2449 65.08 0 2657679..2658371 + 230 87200475 - Saro_2462 - hypothetical protein 2450 63.66 0 2658391..2659686 - 431 87200476 - Saro_2463 - fumarylacetoacetate hydrolase 2451 61.02 -1 2659717..2660265 - 182 87200477 - Saro_2464 - glyoxalase/bleomycin resistance protein/dioxygenase 2452 64.10 0 2660381..2661277 + 298 87200478 - Saro_2465 - LysR family transcriptional regulator 2453 55.97 -2 2661639..2662601 + 320 87200479 - Saro_2466 - phosphoesterase, PA-phosphatase related 2454 59.32 -1 2662662..2663654 + 330 87200480 - Saro_2467 - homocysteine S-methyltransferase 2455 58.85 -2 2663813..2664580 - 255 87200481 - Saro_2468 - TetR family transcriptional regulator 2456 62.48 0 2664741..2667272 + 843 87200482 - Saro_2469 - TonB-dependent receptor 2457 63.41 0 2667360..2669720 + 786 87200483 - Saro_2470 - sulfatase 2458 61.96 -1 2669717..2671183 + 488 87200484 - Saro_2471 - hypothetical protein 2459 63.97 0 2671180..2672589 + 469 87200485 - Saro_2472 - hypothetical protein 2460 62.26 0 2672670..2673440 + 256 87200486 - Saro_2473 - short-chain dehydrogenase/reductase SDR 2461 62.49 0 2673478..2674410 + 310 87200487 - Saro_2474 - hypothetical protein 2462 67.80 0 2674487..2677045 - 852 87200488 - Saro_2475 - hypothetical protein 2463 67.17 0 2677081..2678460 - 459 87200489 - Saro_2476 - NADH/ubiquinone/plastoquinone (complex I) 2464 65.98 0 2678583..2679455 + 290 87200490 - Saro_2477 - LysR family transcriptional regulator 2465 63.25 0 2679961..2680341 + 126 87200491 - Saro_2478 - hemimethylated DNA-binding region protein 2466 61.89 -1 2680366..2681244 - 292 87200492 - Saro_2479 - hypothetical protein 2467 72.88 +2 2681359..2682066 + 235 87200493 - Saro_2480 - GcrA cell cycle regulator 2468 64.36 0 2682188..2683312 + 374 87200494 - Saro_2481 - diguanylate cyclase 2469 63.56 0 2683433..2685751 - 772 87200495 - Saro_2482 - polynucleotide phosphorylase/polyadenylase 2470 57.78 -2 2685914..2686183 - 89 87200496 - Saro_2483 - SSU ribosomal protein S15P 2471 64.70 0 2686189..2687103 - 304 87200497 - Saro_2484 - tRNA pseudouridine synthase B 2472 64.83 0 2687106..2687813 - 235 87200498 - Saro_2485 - peptidase M50 2473 67.75 0 2687810..2688364 - 184 87200499 - Saro_2486 - GCN5-related N-acetyltransferase 2474 65.80 0 2688361..2688939 - 192 87200500 - Saro_2487 - thymidine kinase 2475 64.46 0 2688951..2689358 - 135 87200501 rbfA Saro_2488 - ribosome-binding factor A 2476 62.94 0 2689361..2689897 - 178 87200502 - Saro_2489 - hypothetical protein 2477 67.35 0 2690002..2692629 - 875 87200503 infB Saro_2490 - translation initiation factor IF-2 2478 67.07 0 2692635..2693369 - 244 87200504 - Saro_2491 - hypothetical protein 2479 65.50 0 2693350..2694984 - 544 87200505 nusA Saro_2492 - transcription elongation factor NusA 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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