version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2323 68.84 +1 2482011..2483528 - 505 87200349 - Saro_2335 - lipopolysaccharide biosynthesis 2324 64.97 0 2483554..2484201 - 215 87200350 - Saro_2336 - polysaccharide export protein 2325 65.61 0 2484413..2485639 - 408 87200351 - Saro_2337 - Orn/DAP/Arg decarboxylase 2 2326 68.50 0 2485636..2487165 - 509 87200352 - Saro_2338 - AMP-dependent synthetase and ligase 2327 66.87 0 2487195..2488199 + 334 87200353 - Saro_2339 - hypothetical protein 2328 62.02 -1 2488259..2488516 + 85 87200354 - Saro_2340 - hypothetical protein 2329 71.13 +1 2488513..2489184 + 223 87200355 - Saro_2341 - hypothetical protein 2330 69.84 +1 2489181..2489969 + 262 87200356 - Saro_2342 - esterase/lipase/thioesterase family protein 2331 66.15 0 2489959..2490927 - 322 87200357 - Saro_2343 - thioredoxin reductase 2332 68.69 +1 2491066..2491854 - 262 87200358 - Saro_2344 - protein tyrosine/serine phosphatase 2333 66.92 0 2491959..2492348 - 129 87200359 - Saro_2345 - response regulator receiver domain-containing protein 2334 63.38 0 2492345..2493439 - 364 87200360 - Saro_2346 - hypothetical protein 2335 64.14 0 2493513..2493947 - 144 87200361 - Saro_2347 - phenylacetic acid degradation-related protein 2336 68.25 0 2493944..2495143 - 399 87200362 - Saro_2348 - peptidase M20D, amidohydrolase 2337 66.59 0 2495287..2496534 + 415 87200363 - Saro_2349 - acetyl-CoA acetyltransferase 2338 68.27 0 2496607..2497980 - 457 87200364 - Saro_2350 - peptidase M28 2339 63.10 0 2498081..2499760 + 559 87200365 - Saro_2351 - putative ABC transporter ATP-binding protein 2340 64.58 0 2499782..2500261 - 159 87200366 - Saro_2352 - hypothetical protein 2341 68.18 0 2500513..2501571 + 352 87200367 - Saro_2353 - hypothetical protein 2342 60.08 -1 2502186..2502959 + 257 87200368 - Saro_2355 - 2OG-Fe(II) oxygenase 2343 66.72 0 2502950..2504809 + 619 87200369 - Saro_2356 - hypothetical protein 2344 65.69 0 2504873..2505280 + 135 87200370 - Saro_2357 - hypothetical protein 2345 66.92 0 2505304..2505699 + 131 87200371 - Saro_2358 - hypothetical protein 2346 64.57 0 2505703..2506848 + 381 87200372 - Saro_2359 - glutathionylspermidine synthase 2347 62.87 0 2506853..2508457 - 534 87200373 lysK Saro_2360 - lysyl-tRNA synthetase 2348 61.08 -1 2508639..2509622 - 327 87200374 - Saro_2361 - flagellin-like 2349 68.14 0 2509800..2512523 + 907 87200375 - Saro_2362 - helicase c2 2350 63.00 0 2512520..2513065 + 181 87200376 - Saro_2363 - putative phosphohistidine phosphatase, SixA 2351 62.94 0 2513062..2513517 - 151 87200377 - Saro_2364 - MerR family transcriptional regulator 2352 60.61 -1 2513528..2513824 - 98 87200378 - Saro_2365 - integration host factor, alpha subunit 2353 64.83 0 2513945..2514922 - 325 87200379 - Saro_2366 - 3-oxoacyl-[acyl-carrier-protein] synthase III 2354 66.39 0 2514919..2516013 - 364 87200380 - Saro_2367 - putative glycerol-3-phosphate acyltransferase PlsX 2355 63.33 0 2516040..2516219 - 59 87200381 rpmF Saro_2368 - 50S ribosomal protein L32 2356 64.89 0 2516463..2516855 + 130 87200382 - Saro_2369 - membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) 2357 61.11 -1 2516920..2517657 - 245 87200383 - Saro_2370 - beta-lactamase-like 2358 66.52 0 2517870..2518571 - 233 87200384 - Saro_2371 - putative phage repressor 2359 60.85 -1 2518688..2518876 + 62 87200385 - Saro_2372 - hypothetical protein 2360 66.40 0 2518866..2519243 + 125 87200386 - Saro_2373 - hypothetical protein 2361 63.99 0 2519335..2523933 - 1532 87200387 - Saro_2374 - multihaem cytochrome 2362 63.89 0 2523933..2525951 - 672 87200388 - Saro_2375 - hypothetical protein 2363 64.66 0 2525951..2527939 - 662 87200389 - Saro_2376 - hypothetical protein 2364 66.53 0 2527939..2529354 - 471 87200390 - Saro_2377 - hypothetical protein 2365 63.05 0 2529536..2530972 - 478 87200391 - Saro_2378 - aldehyde dehydrogenase 2366 61.23 -1 2531046..2532737 - 563 87200392 - Saro_2379 - acetolactate synthase 2367 65.26 0 2532877..2533800 - 307 87200393 - Saro_2380 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 2368 65.05 0 2533879..2535360 - 493 87200394 - Saro_2381 - cysteinyl-tRNA synthetase 2369 66.17 0 2535399..2544608 - 3069 87200395 - Saro_2382 - hypothetical protein 2370 66.99 0 2544608..2546482 - 624 87200396 - Saro_2383 - hemolysin activation/secretion protein-like 2371 68.09 0 2546598..2547368 - 256 87200397 - Saro_2384 - hypothetical protein 2372 68.20 0 2547384..2548166 - 260 87200398 - Saro_2385 - hypothetical protein 2373 65.84 0 2548153..2550198 - 681 87200399 - Saro_2386 - adenylate/guanylate cyclase 2374 67.36 0 2550202..2553357 - 1051 87200400 - Saro_2387 - hypothetical protein 2375 67.11 0 2553517..2554197 - 226 87200401 - Saro_2388 - nitroreductase 2376 66.83 0 2554241..2556055 - 604 87200402 - Saro_2389 - cobalt chelatase, pCobT subunit 2377 63.00 0 2556130..2556783 - 217 87200403 - Saro_2390 - putative translaldolase 2378 67.54 0 2556909..2557592 - 227 87200404 - Saro_2391 - hypothetical protein 2379 66.96 0 2557710..2558402 - 230 87200405 - Saro_2392 - hypothetical protein 2380 69.94 +1 2558451..2560652 + 733 87200406 - Saro_2393 - primosome assembly protein PriA 2381 67.37 0 2560701..2562269 + 522 87200407 - Saro_2394 - deoxyribodipyrimidine photolyase-related protein 2382 67.47 0 2562266..2563135 - 289 87200408 - Saro_2395 - abortive infection protein 2383 69.86 +1 2563138..2564169 - 343 87200409 - Saro_2396 - transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase 2384 65.63 0 2564166..2564648 - 160 87200410 - Saro_2397 - hypothetical protein 2385 68.30 0 2564711..2566306 + 531 87200411 - Saro_2398 - peptidase S1 and S6, chymotrypsin/Hap 2386 64.40 0 2566457..2567029 + 190 87200412 - Saro_2399 - F0F1 ATP synthase subunit delta 2387 64.51 0 2567075..2568604 + 509 87200413 - Saro_2400 - F0F1 ATP synthase subunit alpha 2388 63.34 0 2568929..2569801 + 290 87200414 - Saro_2401 - F0F1 ATP synthase subunit gamma 2389 65.77 0 2569866..2571311 + 481 87200415 - Saro_2402 - F0F1 ATP synthase subunit beta 2390 64.34 0 2571460..2571717 + 85 87200416 - Saro_2403 - F0F1 ATP synthase subunit epsilon 2391 63.35 0 2571954..2573342 + 462 87200417 - Saro_2404 - glycine cleavage T protein (aminomethyl transferase) 2392 64.52 0 2573603..2574442 + 279 87200418 - Saro_2405 - glutathione S-transferase-like 2393 66.27 0 2574470..2575483 - 337 87200419 - Saro_2406 - twin-arginine translocation pathway signal 2394 70.37 +1 2575480..2576235 - 251 87200420 - Saro_2407 - IclR family transcriptional regulator 2395 69.72 +1 2576232..2576624 - 130 87200421 - Saro_2408 - hypothetical protein 2396 66.14 0 2576621..2577754 - 377 87200422 - Saro_2409 - methionine synthase, vitamin-B12 independent 2397 63.43 0 2578324..2581104 + 926 87200423 - Saro_2410 - TonB-dependent receptor 2398 70.02 +1 2581270..2583744 - 824 87200424 - Saro_2411 - twin-arginine translocation pathway signal 2399 69.63 +1 2583756..2585444 - 562 87200425 - Saro_2412 - PTS system, N-acetylglucosamine-specific IIBC component 2400 69.10 +1 2585441..2587951 - 836 87200426 - Saro_2413 - phosphoenolpyruvate--protein phosphotransferase 2401 69.03 +1 2588004..2589146 - 380 87200427 - Saro_2414 - N-acetylglucosamine 6-phosphate deacetylase 2402 67.05 0 2589143..2590183 - 346 87200428 - Saro_2415 - glutamine-fructose-6-phosphate transaminase (isomerizing) 2403 65.32 0 2590210..2590950 - 246 87200429 - Saro_2416 - GntR family transcriptional regulator 2404 67.27 0 2591327..2593792 + 821 87200430 - Saro_2417 - Beta-N-acetylhexosaminidase 2405 68.34 0 2593789..2596416 + 875 87200431 - Saro_2418 - beta-mannosidase 2406 68.78 +1 2596413..2598962 + 849 87200432 - Saro_2419 - Beta-glucosidase 2407 67.43 0 2598959..2600401 + 480 87200433 - Saro_2420 - twin-arginine translocation pathway signal 2408 68.14 0 2600398..2602707 + 769 87200434 - Saro_2421 - alpha-1,2-mannosidase, putative 2409 70.67 +1 2602704..2604977 + 757 87200435 - Saro_2422 - hypothetical protein 2410 68.60 +1 2604974..2606890 + 638 87200436 - Saro_2423 - twin-arginine translocation pathway signal 2411 67.70 0 2606887..2609781 - 964 87200437 - Saro_2424 - beta-galactosidase 2412 70.47 +1 2609778..2610539 - 253 87200438 - Saro_2425 - CutC 2413 66.78 0 2610554..2611399 - 281 87200439 - Saro_2426 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2414 66.38 0 2611396..2611743 - 115 87200440 - Saro_2427 - hypothetical protein 2415 66.05 0 2611746..2613047 - 433 87200441 - Saro_2428 - L-fucose permease 2416 66.53 0 2613078..2613818 - 246 87200442 - Saro_2429 - short-chain dehydrogenase/reductase SDR 2417 67.91 0 2613829..2615037 - 402 87200443 - Saro_2430 - Altronate dehydratase 2418 68.48 0 2615034..2615363 - 109 87200444 - Saro_2431 - D-galactarate dehydratase/Altronate hydrolase-like 2419 68.11 0 2615344..2616177 - 277 87200445 - Saro_2432 - amidohydrolase 2 2420 67.58 0 2616174..2617163 - 329 87200446 - Saro_2433 - aldo/keto reductase 2421 65.57 0 2617282..2618100 - 272 87200447 - Saro_2434 - IclR family transcriptional regulator 2422 66.31 0 2618189..2619034 - 281 87200448 - Saro_2435 - AraC family transcriptional regulator 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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