version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 168 62.23 0 166719..169919 - 1066 87198194 - Saro_0168 - TonB-dependent receptor 169 68.07 0 170278..171132 - 284 87198195 - Saro_0169 - peptidase M23B 170 63.73 0 171151..171354 - 67 87198196 - Saro_0170 - hypothetical protein 171 70.19 +1 171381..172742 - 453 87198197 - Saro_0171 - exodeoxyribonuclease VII large subunit 172 65.50 0 172861..174150 + 429 87198198 - Saro_0172 - phosphoribosylamine--glycine ligase 173 65.08 0 174140..174769 - 209 87198199 - Saro_0173 - isochorismatase hydrolase 174 65.75 0 174769..175971 - 400 87198200 - Saro_0174 - succinyl-CoA:(R)-citramalate CoA-transferase 175 63.91 0 175968..177854 - 628 87198201 - Saro_0175 - 5-oxoprolinase (ATP-hydrolyzing) 176 66.18 0 177868..179916 - 682 87198202 - Saro_0176 - 5-oxoprolinase (ATP-hydrolyzing) 177 68.85 +1 179921..180835 - 304 87198203 - Saro_0177 - hydroxymethylglutaryl-CoA lyase 178 63.58 0 181101..183626 + 841 87198204 - Saro_0178 - TonB-dependent receptor 179 65.74 0 183684..184328 + 214 87198205 - Saro_0179 - GntR family transcriptional regulator 180 61.48 -1 184339..184839 - 166 87198206 - Saro_0180 - hemerythrin HHE cation binding region protein 181 67.04 0 184945..185745 + 266 87198207 - Saro_0181 - phosphoglycerate/bisphosphoglycerate mutase 182 70.41 +1 185738..186619 + 293 87198208 - Saro_0182 - hypothetical protein 183 65.63 0 186588..186974 - 128 87198209 - Saro_0183 - ferredoxin-like 184 66.24 0 186971..189067 - 698 87198210 - Saro_0184 - peptidase S9, prolyl oligopeptidase active site region 185 64.84 0 189125..189562 - 145 87198211 - Saro_0185 - hypothetical protein 186 68.04 0 189604..191061 - 485 87198212 - Saro_0186 - Type I secretion outer membrane protein, TolC 187 69.36 +1 191067..191660 - 197 87198213 - Saro_0187 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 188 65.03 0 191828..193351 + 507 87198214 - Saro_0188 - fumarase 189 68.12 0 193439..195367 + 642 87198215 - Saro_0189 - histidine kinase internal region 190 68.03 0 195378..196112 + 244 87198216 - Saro_0190 - LytR/AlgR family transcriptional regulator 191 64.41 0 196166..197983 - 605 87198217 - Saro_0191 - AMP-dependent synthetase and ligase 192 69.63 +1 198104..199855 - 583 87198218 - Saro_0192 - gamma-glutamyltransferase 1 193 68.29 0 199866..200915 - 349 87198219 - Saro_0193 - dihydroorotate dehydrogenase 2 194 69.61 +1 201349..201789 + 146 87198220 - Saro_0194 - BadM/Rrf2 family transcriptional regulator 195 62.69 0 201786..203267 + 493 87198221 - Saro_0195 - cysteine desulfurase activator complex subunit SufB 196 68.20 0 203407..203928 + 173 87198222 - Saro_0196 - hypothetical protein 197 64.38 0 203940..204683 + 247 87198223 - Saro_0197 - FeS assembly ATPase SufC 198 68.57 +1 204680..205414 + 244 87198224 - Saro_0198 - SufBD 199 68.40 0 205411..206622 + 403 87198225 - Saro_0199 - SufS subfamily cysteine desulfurase 200 64.18 0 206619..207101 + 160 87198226 - Saro_0200 - hypothetical protein 201 65.29 0 207125..207487 + 120 87198227 - Saro_0201 - HesB/YadR/YfhF 202 69.89 +1 208948..209598 - 216 87198228 - Saro_0203 - hypothetical protein 203 65.76 0 209688..211682 - 664 87198229 - Saro_0204 - threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase 204 66.78 0 212005..212925 + 306 87198230 - Saro_0205 - short-chain dehydrogenase/reductase SDR 205 67.87 0 213013..213429 + 138 87198231 - Saro_0206 - hypothetical protein 206 63.54 0 213426..213617 + 63 87198232 - Saro_0207 - XRE family transcriptional regulator 207 69.08 +1 213651..214397 + 248 87198233 - Saro_0208 - alpha/beta hydrolase 208 68.91 +1 214390..215325 + 311 87198234 - Saro_0209 - tetratricopeptide TPR_4 209 67.98 0 215322..216314 + 330 87198235 - Saro_0210 - luciferase-like 210 68.74 +1 216557..221278 + 1573 87198236 - Saro_0211 - glutamate dehydrogenase (NAD) 211 72.27 +2 221359..222126 + 255 87198237 - Saro_0212 - molybdenum ABC transporter, periplasmic molybdate-binding protein 212 70.28 +1 222107..222826 + 239 87198238 - Saro_0213 - molybdate ABC transporter permease 213 70.61 +1 222816..223424 + 202 87198239 - Saro_0214 - ABC transporter related 214 66.98 0 223426..224685 - 419 87198240 - Saro_0215 - 6-aminohexanoate-dimer hydrolase 215 67.07 0 224840..226087 + 415 87198241 - Saro_0216 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 216 68.95 +1 226099..227148 - 349 87198242 - Saro_0217 - 4Fe-4S ferredoxin, iron-sulfur binding 217 68.18 0 227195..228184 + 329 87198243 - Saro_0218 - ABC transporter related 218 67.31 0 228181..229425 + 414 87198244 - Saro_0219 - ABC-type Na+ efflux pump permease component-like 219 64.80 0 229503..230840 + 445 87198245 - Saro_0220 - cytochrome P450 220 69.31 +1 230975..231466 + 163 87198246 - Saro_0221 - protein-methionine-S-oxide reductase 221 61.40 -1 231568..231852 - 94 87198247 rpmB Saro_0222 - 50S ribosomal protein L28 222 72.37 +2 231976..232431 + 151 87198248 - Saro_0223 - tRNA-adenosine deaminase 223 70.51 +1 232442..233143 - 233 87198249 - Saro_0224 - ribonuclease T2 224 65.01 0 233145..233567 - 140 87198250 - Saro_0225 - hypothetical protein 225 69.09 +1 233605..234471 - 288 87198251 - Saro_0226 - nicotinate-nucleotide pyrophosphorylase [carboxylating] 226 63.53 0 234587..235384 - 265 87198252 - Saro_0227 - LytR/AlgR family transcriptional regulator 227 63.70 0 235497..236642 - 381 87198253 - Saro_0228 - histidine kinase internal region 228 70.05 +1 236715..237512 - 265 87198254 - Saro_0229 - DSBA oxidoreductase 229 67.32 0 237523..238908 - 461 87198255 - Saro_0230 - peptidase M48, Ste24p 230 69.84 +1 238919..239863 - 314 87198256 - Saro_0231 - esterase/lipase/thioesterase 231 68.37 0 239934..241280 - 448 87198257 - Saro_0232 - hypothetical protein 232 69.21 +1 241371..242273 - 300 87198258 - Saro_0233 - HpcH/HpaI aldolase 233 67.78 0 242270..243529 - 419 87198259 - Saro_0234 - protein of unknown function DUF894, DitE 234 64.61 0 243529..243966 - 145 87198260 - Saro_0235 - hypothetical protein 235 66.24 0 243963..244673 - 236 87198261 - Saro_0236 - C-5 sterol desaturase 236 69.87 +1 244870..246366 - 498 87198262 - Saro_0237 - DEAD/DEAH box helicase-like 237 66.90 0 246695..248005 + 436 87198263 - Saro_0238 - peptidase M20 238 68.25 0 248002..248190 + 62 87198264 - Saro_0239 - hypothetical protein 239 70.14 +1 248163..249485 - 440 87198265 - Saro_0240 - hypothetical protein 240 65.45 0 249771..250346 + 191 87198266 - Saro_0241 - hypothetical protein 241 67.06 0 250407..250910 + 167 87198267 - Saro_0242 - hypothetical protein 242 68.51 0 250928..251362 - 144 87198268 - Saro_0243 - hypothetical protein 243 68.13 0 251857..253635 + 592 87198269 - Saro_0244 - Type I secretion system ATPase, PrtD 244 67.19 0 253632..254972 + 446 87198270 - Saro_0245 - Type I secretion membrane fusion protein, HlyD 245 69.20 +1 254975..256591 + 538 87198271 - Saro_0246 - Type I secretion outer membrane protein, TolC 246 66.46 0 256820..257794 + 324 87198272 - Saro_0247 - bile acid:sodium symporter 247 65.79 0 257827..259188 - 453 87198273 - Saro_0248 - aminotransferase 248 62.34 0 259175..259891 - 238 87198274 - Saro_0249 - TetR family transcriptional regulator 249 63.83 0 260029..262320 + 763 87198275 - Saro_0250 - TonB-dependent receptor 250 66.49 0 262402..264123 + 573 87198276 - Saro_0251 - flavin-containing monooxygenase FMO 251 66.31 0 264168..265013 - 281 87198277 - Saro_0252 - short-chain dehydrogenase/reductase SDR 252 70.87 +1 265107..266273 - 388 87198278 - Saro_0253 - hypothetical protein 253 65.47 0 266331..267662 - 443 87198279 - Saro_0254 - FAD dependent oxidoreductase 254 57.77 -2 268306..269598 + 430 87198280 - Saro_0255 - phage integrase 255 55.67 -2 269577..269876 - 99 87198281 - Saro_0256 - hypothetical protein 256 61.60 -1 270703..271512 - 269 87198282 - Saro_0257 - hypothetical protein 257 56.04 -2 271746..272366 - 206 87198283 - Saro_0258 - hypothetical protein 258 60.76 -1 272477..273949 + 490 87198284 - Saro_0259 - ADP-ribosyl-(dinitrogen reductase) hydrolase 259 58.33 -2 274181..276076 + 631 87198285 - Saro_0260 - protein of unknown function DUF1524 RloF 260 56.08 -2 276073..278802 + 909 87198286 - Saro_0261 - type II restriction enzyme, methylase subunit 261 59.07 -1 278799..279641 + 280 87198287 - Saro_0262 - hypothetical protein 262 54.37 -2 279989..281029 + 346 87198288 - Saro_0263 - hypothetical protein 263 60.19 -1 281100..283169 + 689 87198289 - Saro_0264 - hypothetical protein 264 59.61 -1 283162..284337 + 391 87198290 - Saro_0265 - hypothetical protein 265 68.21 0 284887..285792 + 301 87198291 - Saro_0266 - thioredoxin 266 67.46 0 285798..286427 + 209 87198292 - Saro_0267 - peptidase S16, lon-like 267 66.51 0 286443..287063 - 206 87198293 - Saro_0268 - multiple antibiotic resistance (MarC)-related proteins 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.