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Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2013 69.49 +1 2156671..2157663 + 330 87200039 - Saro_2023 - anthranilate phosphoribosyltransferase 2014 66.03 0 2157759..2158547 + 262 87200040 - Saro_2024 - indole-3-glycerol-phosphate synthase 2015 66.58 0 2158544..2159749 - 401 87200041 - Saro_2025 - beta-lactamase 2016 58.67 -2 2159925..2160737 - 270 87200042 - Saro_2026 - hypothetical protein 2017 67.72 0 2160981..2161454 + 157 87200043 - Saro_2027 - GTP cyclohydrolase subunit MoaC 2018 70.40 +1 2161451..2162656 + 401 87200044 - Saro_2028 - molybdopterin molybdochelatase 2019 65.82 0 2162774..2163478 + 234 87200045 - Saro_2029 - LexA repressor 2020 67.28 0 2163622..2165904 - 760 87200046 - Saro_2030 - ComEC/Rec2-related protein 2021 65.30 0 2165934..2167397 + 487 87200047 - Saro_2031 - glutamyl-tRNA synthetase 2022 62.86 0 2167442..2168728 + 428 87200048 - Saro_2032 - citrate synthase 2023 67.74 0 2168860..2169045 + 61 87200049 - Saro_2033 - hypothetical protein 2024 68.70 +1 2169049..2170425 - 458 87200050 - Saro_2034 - histidine kinase 2025 66.67 0 2170427..2171383 - 318 87200051 - Saro_2035 - hypothetical protein 2026 68.84 +1 2171393..2172637 - 414 87200052 - Saro_2036 - hypothetical protein 2027 64.00 0 2172713..2173012 - 99 87200053 - Saro_2037 - hypothetical protein 2028 66.32 0 2173084..2175678 + 864 87200054 - Saro_2038 - hypothetical protein 2029 64.64 0 2175675..2177105 - 476 87200055 - Saro_2039 - uracil-DNA glycosylase superfamily protein 2030 64.53 0 2177102..2178367 - 421 87200056 - Saro_2040 - radical SAM family protein 2031 61.59 -1 2178644..2179135 + 163 87200057 - Saro_2041 - general stress protein 2032 64.20 0 2179236..2180813 - 525 87200058 - Saro_2042 - phospholipid binding protein 2033 65.98 0 2181011..2181880 + 289 87200059 - Saro_2043 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2034 62.36 0 2181960..2183027 + 355 87200060 - Saro_2044 - hypothetical protein 2035 67.32 0 2183030..2184097 - 355 87200061 - Saro_2045 - L-carnitine dehydratase/bile acid-inducible protein F 2036 67.50 0 2184172..2185611 - 479 87200062 - Saro_2046 - TPR repeat-containing protein 2037 64.20 0 2185739..2187115 - 458 87200063 - Saro_2047 - two component, sigma54 specific, Fis family transcriptional regulator 2038 65.54 0 2187115..2189250 - 711 87200064 - Saro_2048 - multi-sensor signal transduction histidine kinase 2039 63.46 0 2189261..2190664 - 467 87200065 - Saro_2049 - sugar transferase 2040 66.67 0 2190847..2191128 - 93 87200066 - Saro_2050 - hypothetical protein 2041 66.58 0 2191236..2193557 + 773 87200067 - Saro_2051 - hypothetical protein 2042 66.84 0 2193628..2194191 + 187 87200068 - Saro_2052 - cytochrome B561 2043 66.31 0 2194213..2195349 - 378 87200069 - Saro_2053 - chaperone DnaJ 2044 63.78 0 2195435..2197342 - 635 87200070 - Saro_2054 - chaperone DnaK 2045 64.10 0 2197510..2198055 + 181 87200071 - Saro_2055 - hypothetical protein 2046 66.86 0 2198052..2198576 + 174 87200072 - Saro_2056 - hypothetical protein 2047 70.16 +1 2198561..2198818 - 85 87200073 - Saro_2057 - hypothetical protein 2048 66.67 0 2198985..2199662 + 225 87200074 - Saro_2058 - isochorismatase hydrolase 2049 65.60 0 2199768..2200328 - 186 87200075 - Saro_2059 - GrpE protein 2050 67.70 0 2200325..2201389 - 354 87200076 hrcA Saro_2060 - heat-inducible transcription repressor 2051 66.67 0 2201499..2202182 + 227 87200077 - Saro_2061 - ribonuclease PH 2052 66.67 0 2202182..2202811 + 209 87200078 - Saro_2062 - putative deoxyribonucleotide triphosphate pyrophosphatase 2053 65.19 0 2202886..2204040 + 384 87200079 - Saro_2063 - coproporphyrinogen III oxidase 2054 72.60 +2 2204037..2204930 + 297 87200080 - Saro_2064 - phage integrase 2055 67.31 0 2204941..2206344 - 467 87200081 - Saro_2065 - periplasmic sensor signal transduction histidine kinase 2056 62.68 0 2206348..2207025 - 225 87200082 - Saro_2066 - two component transcriptional regulator 2057 67.00 0 2207142..2207441 - 99 87200083 - Saro_2067 - hypothetical protein 2058 66.78 0 2207602..2209398 + 598 87200084 - Saro_2068 - ABC transporter related 2059 70.89 +1 2209399..2209872 - 157 87200085 - Saro_2069 - hypothetical protein 2060 68.06 0 2209989..2210561 + 190 87200086 - Saro_2070 - XRE family transcriptional regulator 2061 70.07 +1 2210563..2211738 + 391 87200087 - Saro_2071 - glycosyl transferase, group 1 2062 62.99 0 2211779..2212756 - 325 87200088 - Saro_2072 - protein translocase subunit secF 2063 65.61 0 2212771..2214378 - 535 87200089 secD Saro_2073 - preprotein translocase subunit SecD 2064 64.55 0 2214406..2214735 - 109 87200090 - Saro_2074 - protein translocase subunit yajC 2065 64.25 0 2215158..2215571 + 137 87200091 - Saro_2075 - hypothetical protein 2066 66.67 0 2215628..2216014 + 128 87200092 - Saro_2076 - hypothetical protein 2067 64.90 0 2216103..2216555 + 150 87200093 - Saro_2077 - 3-dehydroquinate dehydratase 2068 67.48 0 2216655..2217143 + 162 87200094 - Saro_2078 - biotin carboxyl carrier protein 2069 64.51 0 2217156..2218502 + 448 87200095 - Saro_2079 - biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 2070 64.00 0 2218570..2219169 - 199 87200096 - Saro_2080 - hypothetical protein 2071 64.66 0 2219246..2220193 - 315 87200097 - Saro_2081 - glutathione synthetase 2072 64.25 0 2220307..2220513 + 68 87200098 - Saro_2082 - hypothetical protein 2073 72.38 +2 2220539..2220853 - 104 87200099 - Saro_2083 - hypothetical protein 2074 68.22 0 2220892..2221728 - 278 87200100 - Saro_2084 - hypothetical protein 2075 69.19 +1 2221892..2222962 + 356 87200101 - Saro_2085 - extracellular ligand-binding receptor 2076 66.02 0 2223045..2225045 + 666 87200102 - Saro_2086 - DNA topoisomerase IV subunit B 2077 53.95 -2 2225196..2225486 - 96 87200103 - Saro_2087 - plasmid stabilization system protein 2078 62.40 0 2225476..2225733 - 85 87200104 - Saro_2088 - transcriptional regulator 2079 66.67 0 2225765..2226544 - 259 87200105 - Saro_2089 - hypothetical protein 2080 62.29 0 2226779..2227624 + 281 87200106 - Saro_2090 - ATPase AAA_5 2081 61.89 -1 2227684..2228457 - 257 87200107 - Saro_2091 - glutathione S-transferase-like 2082 68.24 0 2228499..2228942 + 147 87200108 - Saro_2092 - glutathione-dependent formaldehyde-activating, GFA 2083 62.69 0 2228948..2230129 + 393 87200109 - Saro_2093 - hypothetical protein 2084 69.90 +1 2230227..2231000 + 257 87200110 - Saro_2094 - enoyl-CoA hydratase 2085 47.35 -2 2231475..2232230 + 251 87200111 - Saro_2095 - hypothetical protein 2086 68.75 +1 2232472..2233047 + 191 87200112 - Saro_2096 - twin-arginine translocation pathway signal 2087 68.47 0 2233152..2234426 + 424 87200113 - Saro_2097 - general substrate transporter 2088 68.50 0 2234649..2235851 - 400 87200114 - Saro_2098 - hypothetical protein 2089 70.53 +1 2235848..2236390 - 180 87200115 - Saro_2099 - hypothetical protein 2090 65.12 0 2236438..2237667 + 409 87200116 - Saro_2100 - tyrosyl-tRNA synthetase 2091 65.78 0 2237799..2238137 + 112 87200117 - Saro_2101 - hypothetical protein 2092 67.29 0 2238258..2239541 + 427 87200118 - Saro_2102 - major facilitator transporter 2093 65.90 0 2239574..2240491 + 305 87200119 - Saro_2103 - cysteine synthase 2094 69.79 +1 2240497..2241201 + 234 87200120 - Saro_2104 - dienelactone hydrolase 2095 66.50 0 2241329..2243131 - 600 87200121 - Saro_2105 - acyl-CoA dehydrogenase-like 2096 64.76 0 2243137..2243607 - 156 87200122 - Saro_2106 - MerR family transcriptional regulator 2097 64.29 0 2243640..2243975 - 111 87200123 - Saro_2107 - phosphoribosyl-AMP cyclohydrolase 2098 69.14 +1 2244411..2245220 - 269 87200124 - Saro_2108 - phosphoribosyltransferase 2099 70.08 +1 2245284..2246075 + 263 87200125 - Saro_2109 - hypothetical protein 2100 66.89 0 2246098..2248761 - 887 87200126 - Saro_2110 - pyruvate phosphate dikinase 2101 64.73 0 2248829..2251045 - 738 87200127 - Saro_2111 - glycine--tRNA ligase 2102 63.30 0 2251230..2252180 - 316 87200128 glyQ Saro_2112 - glycyl-tRNA synthetase subunit alpha 2103 66.67 0 2252270..2253178 + 302 87200129 - Saro_2113 - GumN 2104 70.32 +1 2253175..2254077 + 300 87200130 - Saro_2114 - GumN 2105 64.23 0 2254216..2254830 + 204 87200131 - Saro_2115 - 50S ribosomal protein L25/general stress protein Ctc 2106 60.94 -1 2254975..2255550 + 191 87200132 - Saro_2116 - peptidyl-tRNA hydrolase 2107 70.05 +1 2255695..2256108 + 137 87200133 - Saro_2117 - hypothetical protein 2108 70.63 +1 2256144..2257658 - 504 87200134 - Saro_2118 - TPR repeat-containing protein 2109 66.53 0 2257832..2258548 + 238 87200135 - Saro_2119 - hypothetical protein 2110 69.24 +1 2258634..2260151 - 505 87200136 - Saro_2120 - TPR repeat-containing protein 2111 64.12 0 2260265..2261365 + 366 87200137 - Saro_2121 - translation-associated GTPase 2112 67.93 0 2261421..2261816 - 131 87200138 - Saro_2122 - MerR family transcriptional regulator 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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