version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1964 63.35 0 2090151..2090723 - 190 87199990 - Saro_1973 - hypothetical protein 1965 65.18 0 2090753..2092093 - 446 87199991 - Saro_1974 - branched-chain alpha-keto acid dehydrogenase subunit E2 1966 61.36 -1 2092097..2093152 - 351 87199992 - Saro_1975 - branched-chain alpha-keto acid dehydrogenase E1 component 1967 64.08 0 2093149..2094423 - 424 87199993 - Saro_1976 - branched-chain alpha-keto acid dehydrogenase E1 component 1968 61.72 -1 2094575..2095525 - 316 87199994 - Saro_1977 - thymidylate synthase 1969 64.54 0 2095976..2096539 + 187 87199995 - Saro_1978 - hypothetical protein 1970 65.16 0 2096600..2098657 - 685 87199996 - Saro_1979 - DEAD/DEAH box helicase-like 1971 60.99 -1 2098850..2099254 + 134 87199997 - Saro_1980 - AtsE 1972 63.12 0 2099370..2099651 + 93 87199998 - Saro_1981 - hypothetical protein 1973 65.52 0 2099682..2103176 + 1164 87199999 - Saro_1982 - transcription-repair coupling factor 1974 65.82 0 2103173..2104465 - 430 87200000 - Saro_1983 - diguanylate cyclase/phosphodiesterase 1975 63.61 0 2104598..2105383 + 261 87200001 ppnK Saro_1984 - inorganic polyphosphate/ATP-NAD kinase 1976 61.58 -1 2105847..2106023 + 58 87200002 - Saro_1985 - hypothetical protein 1977 66.10 0 2106023..2106556 + 177 87200003 - Saro_1986 - hypothetical protein 1978 65.96 0 2106466..2109585 - 1039 87200004 - Saro_1987 - hypothetical protein 1979 66.92 0 2109582..2117429 - 2615 87200005 - Saro_1988 - hypothetical protein 1980 65.82 0 2117429..2119192 - 587 87200006 - Saro_1989 - hemolysin activation/secretion protein-like 1981 63.08 0 2119388..2122123 - 911 87200007 - Saro_1990 - preprotein translocase subunit SecA 1982 70.10 +1 2122230..2122520 - 96 87200008 - Saro_1991 - hypothetical protein 1983 66.67 0 2123244..2124470 + 408 87200009 argJ Saro_1993 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 1984 63.70 0 2124484..2125089 + 201 87200010 - Saro_1994 - glutathione S-transferase-like 1985 66.91 0 2125098..2125907 + 269 87200011 - Saro_1995 - inositol monophosphatase 1986 63.86 0 2125964..2126284 - 106 87200012 - Saro_1996 - thioredoxin 1987 67.47 0 2126345..2129830 - 1161 87200013 - Saro_1997 - UvrD/REP helicase 1988 70.22 +1 2129827..2132808 - 993 87200014 - Saro_1998 - helicase 1989 66.25 0 2132808..2133530 - 240 87200015 - Saro_1999 - nucleotidyl transferase 1990 66.87 0 2133527..2134510 - 327 87200016 - Saro_2000 - aminoglycoside phosphotransferase 1991 68.67 +1 2134501..2134950 - 149 87200017 - Saro_2001 - hypothetical protein 1992 68.71 +1 2134947..2137295 - 782 87200018 - Saro_2002 - PAS/PAC sensor signal transduction histidine kinase 1993 62.69 0 2137479..2138885 - 468 87200019 - Saro_2003 - S-adenosyl-L-homocysteine hydrolase 1994 64.38 0 2139107..2139586 + 159 87200020 - Saro_2004 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1995 67.06 0 2139629..2140384 - 251 87200021 - Saro_2005 - hypothetical protein 1996 67.32 0 2140389..2140850 - 153 87200022 - Saro_2006 - hypothetical protein 1997 65.85 0 2140974..2141588 - 204 87200023 - Saro_2007 - GTP cyclohydrolase 1998 64.82 0 2141605..2143119 - 504 87200024 - Saro_2008 - phospholipase D/transphosphatidylase 1999 64.45 0 2143262..2144029 + 255 87200025 - Saro_2009 - hypothetical protein 2000 66.02 0 2144010..2144318 - 102 87200026 - Saro_2010 - septum formation initiator 2001 66.04 0 2144540..2145019 - 159 87200027 - Saro_2011 - hypothetical protein 2002 67.26 0 2145016..2145861 - 281 87200028 - Saro_2012 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2003 62.17 0 2145858..2146124 - 88 87200029 - Saro_2013 - glutaredoxin GrxC 2004 65.15 0 2146285..2146746 + 153 87200030 - Saro_2014 - heat shock protein Hsp20 2005 68.44 0 2146923..2148500 + 525 87200031 - Saro_2015 - ABC transporter related 2006 67.10 0 2148509..2149198 - 229 87200032 - Saro_2016 - Crp/FNR family transcriptional regulator 2007 65.38 0 2149283..2150914 - 543 87200033 - Saro_2017 - CTP synthetase 2008 68.94 +1 2151067..2151462 - 131 87200034 - Saro_2018 - protein translocase subunit secG 2009 69.26 +1 2151568..2152338 - 256 87200035 - Saro_2019 - triosephosphate isomerase 2010 68.42 0 2152601..2154541 + 646 87200036 - Saro_2020 - hypothetical protein 2011 68.82 +1 2154555..2156090 + 511 87200037 - Saro_2021 - anthranilate synthase, component I 2012 65.48 0 2156087..2156674 + 195 87200038 - Saro_2022 - anthranilate synthase, component II 2013 69.49 +1 2156671..2157663 + 330 87200039 - Saro_2023 - anthranilate phosphoribosyltransferase 2014 66.03 0 2157759..2158547 + 262 87200040 - Saro_2024 - indole-3-glycerol-phosphate synthase 2015 66.58 0 2158544..2159749 - 401 87200041 - Saro_2025 - beta-lactamase 2016 58.67 -2 2159925..2160737 - 270 87200042 - Saro_2026 - hypothetical protein 2017 67.72 0 2160981..2161454 + 157 87200043 - Saro_2027 - GTP cyclohydrolase subunit MoaC 2018 70.40 +1 2161451..2162656 + 401 87200044 - Saro_2028 - molybdopterin molybdochelatase 2019 65.82 0 2162774..2163478 + 234 87200045 - Saro_2029 - LexA repressor 2020 67.28 0 2163622..2165904 - 760 87200046 - Saro_2030 - ComEC/Rec2-related protein 2021 65.30 0 2165934..2167397 + 487 87200047 - Saro_2031 - glutamyl-tRNA synthetase 2022 62.86 0 2167442..2168728 + 428 87200048 - Saro_2032 - citrate synthase 2023 67.74 0 2168860..2169045 + 61 87200049 - Saro_2033 - hypothetical protein 2024 68.70 +1 2169049..2170425 - 458 87200050 - Saro_2034 - histidine kinase 2025 66.67 0 2170427..2171383 - 318 87200051 - Saro_2035 - hypothetical protein 2026 68.84 +1 2171393..2172637 - 414 87200052 - Saro_2036 - hypothetical protein 2027 64.00 0 2172713..2173012 - 99 87200053 - Saro_2037 - hypothetical protein 2028 66.32 0 2173084..2175678 + 864 87200054 - Saro_2038 - hypothetical protein 2029 64.64 0 2175675..2177105 - 476 87200055 - Saro_2039 - uracil-DNA glycosylase superfamily protein 2030 64.53 0 2177102..2178367 - 421 87200056 - Saro_2040 - radical SAM family protein 2031 61.59 -1 2178644..2179135 + 163 87200057 - Saro_2041 - general stress protein 2032 64.20 0 2179236..2180813 - 525 87200058 - Saro_2042 - phospholipid binding protein 2033 65.98 0 2181011..2181880 + 289 87200059 - Saro_2043 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2034 62.36 0 2181960..2183027 + 355 87200060 - Saro_2044 - hypothetical protein 2035 67.32 0 2183030..2184097 - 355 87200061 - Saro_2045 - L-carnitine dehydratase/bile acid-inducible protein F 2036 67.50 0 2184172..2185611 - 479 87200062 - Saro_2046 - TPR repeat-containing protein 2037 64.20 0 2185739..2187115 - 458 87200063 - Saro_2047 - two component, sigma54 specific, Fis family transcriptional regulator 2038 65.54 0 2187115..2189250 - 711 87200064 - Saro_2048 - multi-sensor signal transduction histidine kinase 2039 63.46 0 2189261..2190664 - 467 87200065 - Saro_2049 - sugar transferase 2040 66.67 0 2190847..2191128 - 93 87200066 - Saro_2050 - hypothetical protein 2041 66.58 0 2191236..2193557 + 773 87200067 - Saro_2051 - hypothetical protein 2042 66.84 0 2193628..2194191 + 187 87200068 - Saro_2052 - cytochrome B561 2043 66.31 0 2194213..2195349 - 378 87200069 - Saro_2053 - chaperone DnaJ 2044 63.78 0 2195435..2197342 - 635 87200070 - Saro_2054 - chaperone DnaK 2045 64.10 0 2197510..2198055 + 181 87200071 - Saro_2055 - hypothetical protein 2046 66.86 0 2198052..2198576 + 174 87200072 - Saro_2056 - hypothetical protein 2047 70.16 +1 2198561..2198818 - 85 87200073 - Saro_2057 - hypothetical protein 2048 66.67 0 2198985..2199662 + 225 87200074 - Saro_2058 - isochorismatase hydrolase 2049 65.60 0 2199768..2200328 - 186 87200075 - Saro_2059 - GrpE protein 2050 67.70 0 2200325..2201389 - 354 87200076 hrcA Saro_2060 - heat-inducible transcription repressor 2051 66.67 0 2201499..2202182 + 227 87200077 - Saro_2061 - ribonuclease PH 2052 66.67 0 2202182..2202811 + 209 87200078 - Saro_2062 - putative deoxyribonucleotide triphosphate pyrophosphatase 2053 65.19 0 2202886..2204040 + 384 87200079 - Saro_2063 - coproporphyrinogen III oxidase 2054 72.60 +2 2204037..2204930 + 297 87200080 - Saro_2064 - phage integrase 2055 67.31 0 2204941..2206344 - 467 87200081 - Saro_2065 - periplasmic sensor signal transduction histidine kinase 2056 62.68 0 2206348..2207025 - 225 87200082 - Saro_2066 - two component transcriptional regulator 2057 67.00 0 2207142..2207441 - 99 87200083 - Saro_2067 - hypothetical protein 2058 66.78 0 2207602..2209398 + 598 87200084 - Saro_2068 - ABC transporter related 2059 70.89 +1 2209399..2209872 - 157 87200085 - Saro_2069 - hypothetical protein 2060 68.06 0 2209989..2210561 + 190 87200086 - Saro_2070 - XRE family transcriptional regulator 2061 70.07 +1 2210563..2211738 + 391 87200087 - Saro_2071 - glycosyl transferase, group 1 2062 62.99 0 2211779..2212756 - 325 87200088 - Saro_2072 - protein translocase subunit secF 2063 65.61 0 2212771..2214378 - 535 87200089 secD Saro_2073 - preprotein translocase subunit SecD 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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