version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1793 68.04 0 1899458..1899820 + 120 87199819 - Saro_1802 - hypothetical protein 1794 65.00 0 1899884..1902463 + 859 87199820 - Saro_1803 - DNA topoisomerase I 1795 65.36 0 1902515..1904047 - 510 87199821 - Saro_1804 - hypothetical protein 1796 68.20 0 1904223..1905068 - 281 87199822 - Saro_1805 - hypothetical protein 1797 63.53 0 1905065..1905958 - 297 87199823 era Saro_1806 - GTP-binding protein Era 1798 68.12 0 1906007..1906765 - 252 87199824 - Saro_1807 - ribonuclease III 1799 63.43 0 1906678..1907541 - 287 87199825 - Saro_1808 - signal peptidase I 1800 66.73 0 1907699..1909222 + 507 87199826 - Saro_1809 - glucose-6-phosphate isomerase 1801 64.54 0 1909311..1910672 + 453 87199827 - Saro_1810 - NADPH-glutathione reductase 1802 65.56 0 1910740..1911462 + 240 87199828 - Saro_1811 - short-chain dehydrogenase/reductase SDR 1803 63.20 0 1911497..1912246 - 249 87199829 - Saro_1812 - oxidoreductase, molybdopterin binding 1804 62.89 0 1912243..1913142 - 299 87199830 - Saro_1813 - cytochrome B561 1805 68.83 +1 1913169..1914140 - 323 87199831 - Saro_1814 - farnesyl-diphosphate farnesyltransferase 1806 66.49 0 1914145..1914726 - 193 87199832 - Saro_1815 - hypothetical protein 1807 63.35 0 1914723..1916201 - 492 87199833 - Saro_1816 - amine oxidase 1808 68.09 0 1916198..1917394 - 398 87199834 - Saro_1817 - lycopene cyclase 1809 63.99 0 1917490..1918086 + 198 87199835 - Saro_1818 - hypothetical protein 1810 63.18 0 1918216..1919733 + 505 87199836 - Saro_1819 - flavin-containing monooxygenase FMO 1811 63.59 0 1919909..1921273 - 454 87199837 - Saro_1820 - dimethylaniline monooxygenase (N-oxide forming) 1812 66.02 0 1921284..1922516 - 410 87199838 - Saro_1821 - cytochrome P450 1813 68.93 +1 1922605..1923888 - 427 87199839 - Saro_1822 - hypothetical protein 1814 65.66 0 1923888..1925978 - 696 87199840 - Saro_1823 - TonB-dependent siderophore receptor 1815 63.85 0 1926312..1928192 + 626 87199841 - Saro_1824 - thiamine biosynthesis protein ThiC 1816 63.73 0 1928289..1928696 + 135 87199842 - Saro_1825 - glutathione-dependent formaldehyde-activating, GFA 1817 65.40 0 1928742..1929137 + 131 87199843 - Saro_1826 - hypothetical protein 1818 62.88 0 1929205..1929600 + 131 87199844 - Saro_1827 - hypothetical protein 1819 64.40 0 1929593..1930033 - 146 87199845 - Saro_1828 - hypothetical protein 1820 65.00 0 1930221..1930520 - 99 87199846 - Saro_1829 - hypothetical protein 1821 62.75 0 1930793..1931098 - 101 87199847 - Saro_1830 - PhnA protein 1822 66.53 0 1931151..1931903 - 250 87199848 - Saro_1831 - hypothetical protein 1823 66.67 0 1931908..1932312 - 134 87199849 - Saro_1832 - hypothetical protein 1824 65.75 0 1932309..1932746 - 145 87199850 - Saro_1833 - hypothetical protein 1825 65.15 0 1932781..1933176 - 131 87199851 - Saro_1834 - hypothetical protein 1826 67.62 0 1933469..1934308 - 279 87199852 dapD Saro_1835 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1827 62.61 0 1934355..1935044 - 229 87199853 - Saro_1836 - pyrimidine 5-nucleotidase 1828 70.00 +1 1935151..1937463 + 770 87199854 - Saro_1837 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1829 67.46 0 1937510..1938643 - 377 87199855 - Saro_1838 - glucose sorbosone dehydrogenase 1830 68.36 0 1938693..1939283 + 196 87199856 - Saro_1839 - ribonuclease H 1831 63.08 0 1939534..1940676 + 380 87199857 - Saro_1840 - DNA methylase N-4/N-6 1832 67.84 0 1940747..1941853 + 368 87199858 - Saro_1841 - dihydropteroate synthase 1833 67.86 0 1941856..1943274 - 472 87199859 - Saro_1842 - two component, sigma54 specific, Fis family transcriptional regulator 1834 65.07 0 1943572..1944699 + 375 87199860 - Saro_1843 - alanine dehydrogenase/PNT-like 1835 60.35 -1 1944711..1944995 + 94 87199861 - Saro_1844 - putative NAD(P) transhydrogenase subunit alpha PART 2 transmembrane protein 1836 64.54 0 1944995..1946407 + 470 87199862 - Saro_1845 - NAD(P) transhydrogenase, beta subunit 1837 68.79 +1 1946407..1946736 + 109 87199863 - Saro_1846 - hypothetical protein 1838 64.21 0 1946888..1947580 + 230 87199864 - Saro_1847 - aspartate racemase 1839 66.92 0 1947716..1948885 + 389 87199865 - Saro_1848 - deoxyguanosinetriphosphate triphosphohydrolase 1840 68.55 +1 1948878..1949567 + 229 87199866 - Saro_1849 - NAD-dependent epimerase/dehydratase 1841 67.44 0 1949880..1951046 + 388 87199867 - Saro_1850 - glycine cleavage system aminomethyltransferase T 1842 64.52 0 1951046..1951417 + 123 87199868 - Saro_1851 - glycine cleavage system protein H 1843 67.03 0 1951422..1952780 + 452 87199869 - Saro_1852 - glycine dehydrogenase subunit 1 1844 67.44 0 1952777..1954336 + 519 87199870 - Saro_1853 - glycine dehydrogenase subunit 2 1845 65.25 0 1954635..1955552 - 305 87199871 - Saro_1854 - hypothetical protein 1846 65.10 0 1955559..1955813 + 84 87199872 - Saro_1855 - hypothetical protein 1847 64.24 0 1955826..1957391 - 521 87199873 - Saro_1856 - type II secretion system protein E 1848 65.56 0 1957674..1958576 + 300 87199874 - Saro_1857 - hypothetical protein 1849 67.26 0 1958674..1959516 - 280 87199875 - Saro_1858 - haloacid dehalogenase-like hydrolase 1850 66.67 0 1959513..1960985 - 490 87199876 - Saro_1859 - pyruvate carboxyltransferase 1851 68.99 +1 1960982..1962316 - 444 87199877 - Saro_1860 - carbamoyl-phosphate synthase L chain, ATP-binding 1852 66.67 0 1962318..1962761 - 147 87199878 - Saro_1861 - biotin carboxyl carrier protein 1853 66.91 0 1962769..1963989 - 406 87199879 - Saro_1862 - hypothetical protein 1854 67.42 0 1964115..1964915 + 266 87199880 - Saro_1863 - IclR family transcriptional regulator 1855 66.96 0 1964998..1966011 + 337 87199881 - Saro_1864 - alcohol dehydrogenase 1856 66.12 0 1966070..1966615 + 181 87199882 - Saro_1865 - hypothetical protein 1857 66.43 0 1966737..1968014 + 425 87199883 - Saro_1866 - major facilitator transporter 1858 65.92 0 1968031..1968969 + 312 87199884 - Saro_1867 - AraC family transcriptional regulator 1859 64.48 0 1969087..1971690 + 867 87199885 - Saro_1868 - TonB-dependent receptor 1860 61.80 -1 1971767..1972300 + 177 87199886 - Saro_1869 - 2,4'-dihydroxyacetophenone dioxygenase 1861 61.64 -1 1972326..1972862 + 178 87199887 - Saro_1870 - 2,4'-dihydroxyacetophenone dioxygenase 1862 64.04 0 1972870..1973403 + 177 87199888 - Saro_1871 - hypothetical protein 1863 66.85 0 1973414..1974484 + 356 87199889 - Saro_1872 - Rieske (2Fe-2S) protein 1864 65.24 0 1974514..1975353 + 279 87199890 - Saro_1873 - short-chain dehydrogenase/reductase SDR 1865 66.47 0 1975363..1976370 + 335 87199891 - Saro_1874 - GroES-related 1866 64.65 0 1976401..1977243 + 280 87199892 - Saro_1875 - short-chain dehydrogenase/reductase SDR 1867 61.57 -1 1977248..1978189 - 313 87199893 - Saro_1876 - intradiol ring-cleavage dioxygenase 1868 63.11 0 1978421..1979797 + 458 87199894 - Saro_1877 - major facilitator transporter 1869 68.48 0 1979797..1981896 + 699 87199895 - Saro_1878 - glycoside hydrolase, clan GH-D 1870 65.52 0 1981934..1983067 + 377 87199896 - Saro_1879 - levansucrase 1871 66.09 0 1983088..1984122 - 344 87199897 - Saro_1880 - LacI family transcription regulator 1872 62.85 0 1984386..1986902 + 838 87199898 - Saro_1881 - TonB-dependent receptor 1873 64.14 0 1987056..1988561 + 501 87199899 - Saro_1882 - tryptophan halogenase 1874 69.07 +1 1988558..1989931 + 457 87199900 - Saro_1883 - TPR repeat-containing protein 1875 66.89 0 1989933..1991255 + 440 87199901 - Saro_1884 - glycoside hydrolase family protein 1876 67.11 0 1991234..1992139 - 301 87199902 - Saro_1885 - fructokinase 1877 66.00 0 1992136..1993641 - 501 87199903 - Saro_1886 - major facilitator transporter 1878 66.09 0 1993798..1994832 - 344 87199904 - Saro_1887 - LacI family transcription regulator 1879 64.13 0 1995165..1997885 + 906 87199905 - Saro_1888 - TonB-dependent receptor 1880 63.89 0 1998001..1999515 + 504 87199906 - Saro_1889 - tryptophan halogenase 1881 63.93 0 1999508..2001337 + 609 87199907 - Saro_1890 - alpha amylase, catalytic region 1882 63.85 0 2001334..2002968 + 544 87199908 - Saro_1891 - alpha amylase, catalytic region 1883 63.88 0 2002968..2005016 + 682 87199909 - Saro_1892 - alpha-glucosidase 1884 64.39 0 2005196..2006644 + 482 87199910 - Saro_1893 - glucose-6-phosphate 1-dehydrogenase 1885 64.91 0 2006637..2007263 + 208 87199911 - Saro_1894 - 6-phosphogluconolactonase 1886 65.62 0 2007263..2009083 + 606 87199912 - Saro_1895 - phosphogluconate dehydratase 1887 66.15 0 2009128..2010096 + 322 87199913 - Saro_1896 - glucokinase 1888 65.52 0 2010219..2011001 + 260 87199914 - Saro_1897 - enoyl-CoA hydratase 1889 65.78 0 2011040..2011489 + 149 87199915 - Saro_1898 - hypothetical protein 1890 66.31 0 2011490..2012599 - 369 87199916 - Saro_1899 - 3-dehydroquinate synthase 1891 63.29 0 2012590..2013240 - 216 87199917 - Saro_1900 - shikimate kinase 1892 65.61 0 2013392..2015284 + 630 87199918 - Saro_1901 - hypothetical protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0