version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1756 63.29 0 1861258..1862499 + 413 87199782 - Saro_1765 - LolC/E family lipoprotein releasing system, transmembrane protein 1757 67.26 0 1862492..1863166 + 224 87199783 - Saro_1766 - ABC transporter related 1758 66.29 0 1863220..1863486 + 88 87199784 - Saro_1767 - hypothetical protein 1759 62.39 0 1863552..1863785 + 77 87199785 - Saro_1768 - hypothetical protein 1760 60.94 -1 1863782..1864270 + 162 87199786 - Saro_1769 - glutathione peroxidase 1761 65.27 0 1864289..1867936 + 1215 87199787 - Saro_1770 - DNA polymerase III, alpha subunit 1762 65.00 0 1867958..1869577 + 539 87199788 - Saro_1771 - AMP-dependent synthetase and ligase 1763 63.10 0 1869570..1870046 + 158 87199789 - Saro_1772 - hypothetical protein 1764 63.06 0 1870043..1871179 - 378 87199790 - Saro_1773 - radical SAM family protein 1765 68.18 0 1871233..1872684 + 483 87199791 - Saro_1774 - periplasmic sensor signal transduction histidine kinase 1766 63.80 0 1872681..1873412 + 243 87199792 - Saro_1775 - two component transcriptional regulator 1767 65.29 0 1873372..1874169 - 265 87199793 - Saro_1776 - hypothetical protein 1768 64.71 0 1874166..1875185 - 339 87199794 - Saro_1777 - hypothetical protein 1769 64.20 0 1875277..1875804 - 175 87199795 - Saro_1778 - molybdopterin binding domain-containing protein 1770 69.31 +1 1875794..1877572 - 592 87199796 - Saro_1779 - lytic transglycosylase, catalytic 1771 67.82 0 1877572..1878348 - 258 87199797 - Saro_1780 - hypothetical protein 1772 64.18 0 1878453..1880102 + 549 87199798 - Saro_1781 - electron-transferring-flavoprotein dehydrogenase 1773 68.65 +1 1880119..1880976 + 285 87199799 - Saro_1782 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1774 65.70 0 1880973..1881695 + 240 87199800 - Saro_1783 - N-formylglutamate amidohydrolase 1775 65.31 0 1881817..1883664 + 615 87199801 - Saro_1784 - dihydroxy-acid dehydratase 1776 66.38 0 1883666..1884019 + 117 87199802 - Saro_1785 - hypothetical protein 1777 70.72 +1 1884003..1885409 + 468 87199803 - Saro_1786 - YjeF-related protein-like 1778 68.91 +1 1885409..1886614 + 401 87199804 - Saro_1787 - (Uracil-5)-methyltransferase 1779 64.34 0 1886619..1887047 - 142 87199805 - Saro_1788 - hypothetical protein 1780 65.29 0 1887082..1887516 - 144 87199806 - Saro_1789 - hypothetical protein 1781 61.19 -1 1887709..1888914 + 401 87199807 - Saro_1790 - saccharopine dehydrogenase 1782 62.96 0 1888914..1889264 + 116 87199808 - Saro_1791 - putative transmembrane signal peptide protein 1783 65.17 0 1889275..1890474 + 399 87199809 - Saro_1792 - Orn/DAP/Arg decarboxylase 2 1784 66.42 0 1890515..1891741 + 408 87199810 - Saro_1793 - 6-aminohexanoate-dimer hydrolase 1785 63.52 0 1891915..1893120 + 401 87199811 - Saro_1794 - Orn/DAP/Arg decarboxylase 2 1786 66.41 0 1893193..1893585 - 130 87199812 - Saro_1795 - hypothetical protein 1787 66.08 0 1893626..1894309 - 227 87199813 - Saro_1796 - nitroreductase 1788 63.14 0 1894532..1895752 - 406 87199814 - Saro_1797 - 5-aminolevulinate synthase 1789 66.23 0 1895894..1896814 - 306 87199815 - Saro_1798 - beta-lactamase-like 1790 70.14 +1 1896831..1897664 - 277 87199816 - Saro_1799 - glutamate racemase 1791 67.85 0 1897735..1898328 + 197 87199817 - Saro_1800 - acyl-phosphate glycerol-3-phosphate acyltransferase 1792 68.44 0 1898325..1899452 + 375 87199818 - Saro_1801 - DNA processing protein DprA, putative 1793 68.04 0 1899458..1899820 + 120 87199819 - Saro_1802 - hypothetical protein 1794 65.00 0 1899884..1902463 + 859 87199820 - Saro_1803 - DNA topoisomerase I 1795 65.36 0 1902515..1904047 - 510 87199821 - Saro_1804 - hypothetical protein 1796 68.20 0 1904223..1905068 - 281 87199822 - Saro_1805 - hypothetical protein 1797 63.53 0 1905065..1905958 - 297 87199823 era Saro_1806 - GTP-binding protein Era 1798 68.12 0 1906007..1906765 - 252 87199824 - Saro_1807 - ribonuclease III 1799 63.43 0 1906678..1907541 - 287 87199825 - Saro_1808 - signal peptidase I 1800 66.73 0 1907699..1909222 + 507 87199826 - Saro_1809 - glucose-6-phosphate isomerase 1801 64.54 0 1909311..1910672 + 453 87199827 - Saro_1810 - NADPH-glutathione reductase 1802 65.56 0 1910740..1911462 + 240 87199828 - Saro_1811 - short-chain dehydrogenase/reductase SDR 1803 63.20 0 1911497..1912246 - 249 87199829 - Saro_1812 - oxidoreductase, molybdopterin binding 1804 62.89 0 1912243..1913142 - 299 87199830 - Saro_1813 - cytochrome B561 1805 68.83 +1 1913169..1914140 - 323 87199831 - Saro_1814 - farnesyl-diphosphate farnesyltransferase 1806 66.49 0 1914145..1914726 - 193 87199832 - Saro_1815 - hypothetical protein 1807 63.35 0 1914723..1916201 - 492 87199833 - Saro_1816 - amine oxidase 1808 68.09 0 1916198..1917394 - 398 87199834 - Saro_1817 - lycopene cyclase 1809 63.99 0 1917490..1918086 + 198 87199835 - Saro_1818 - hypothetical protein 1810 63.18 0 1918216..1919733 + 505 87199836 - Saro_1819 - flavin-containing monooxygenase FMO 1811 63.59 0 1919909..1921273 - 454 87199837 - Saro_1820 - dimethylaniline monooxygenase (N-oxide forming) 1812 66.02 0 1921284..1922516 - 410 87199838 - Saro_1821 - cytochrome P450 1813 68.93 +1 1922605..1923888 - 427 87199839 - Saro_1822 - hypothetical protein 1814 65.66 0 1923888..1925978 - 696 87199840 - Saro_1823 - TonB-dependent siderophore receptor 1815 63.85 0 1926312..1928192 + 626 87199841 - Saro_1824 - thiamine biosynthesis protein ThiC 1816 63.73 0 1928289..1928696 + 135 87199842 - Saro_1825 - glutathione-dependent formaldehyde-activating, GFA 1817 65.40 0 1928742..1929137 + 131 87199843 - Saro_1826 - hypothetical protein 1818 62.88 0 1929205..1929600 + 131 87199844 - Saro_1827 - hypothetical protein 1819 64.40 0 1929593..1930033 - 146 87199845 - Saro_1828 - hypothetical protein 1820 65.00 0 1930221..1930520 - 99 87199846 - Saro_1829 - hypothetical protein 1821 62.75 0 1930793..1931098 - 101 87199847 - Saro_1830 - PhnA protein 1822 66.53 0 1931151..1931903 - 250 87199848 - Saro_1831 - hypothetical protein 1823 66.67 0 1931908..1932312 - 134 87199849 - Saro_1832 - hypothetical protein 1824 65.75 0 1932309..1932746 - 145 87199850 - Saro_1833 - hypothetical protein 1825 65.15 0 1932781..1933176 - 131 87199851 - Saro_1834 - hypothetical protein 1826 67.62 0 1933469..1934308 - 279 87199852 dapD Saro_1835 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1827 62.61 0 1934355..1935044 - 229 87199853 - Saro_1836 - pyrimidine 5-nucleotidase 1828 70.00 +1 1935151..1937463 + 770 87199854 - Saro_1837 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1829 67.46 0 1937510..1938643 - 377 87199855 - Saro_1838 - glucose sorbosone dehydrogenase 1830 68.36 0 1938693..1939283 + 196 87199856 - Saro_1839 - ribonuclease H 1831 63.08 0 1939534..1940676 + 380 87199857 - Saro_1840 - DNA methylase N-4/N-6 1832 67.84 0 1940747..1941853 + 368 87199858 - Saro_1841 - dihydropteroate synthase 1833 67.86 0 1941856..1943274 - 472 87199859 - Saro_1842 - two component, sigma54 specific, Fis family transcriptional regulator 1834 65.07 0 1943572..1944699 + 375 87199860 - Saro_1843 - alanine dehydrogenase/PNT-like 1835 60.35 -1 1944711..1944995 + 94 87199861 - Saro_1844 - putative NAD(P) transhydrogenase subunit alpha PART 2 transmembrane protein 1836 64.54 0 1944995..1946407 + 470 87199862 - Saro_1845 - NAD(P) transhydrogenase, beta subunit 1837 68.79 +1 1946407..1946736 + 109 87199863 - Saro_1846 - hypothetical protein 1838 64.21 0 1946888..1947580 + 230 87199864 - Saro_1847 - aspartate racemase 1839 66.92 0 1947716..1948885 + 389 87199865 - Saro_1848 - deoxyguanosinetriphosphate triphosphohydrolase 1840 68.55 +1 1948878..1949567 + 229 87199866 - Saro_1849 - NAD-dependent epimerase/dehydratase 1841 67.44 0 1949880..1951046 + 388 87199867 - Saro_1850 - glycine cleavage system aminomethyltransferase T 1842 64.52 0 1951046..1951417 + 123 87199868 - Saro_1851 - glycine cleavage system protein H 1843 67.03 0 1951422..1952780 + 452 87199869 - Saro_1852 - glycine dehydrogenase subunit 1 1844 67.44 0 1952777..1954336 + 519 87199870 - Saro_1853 - glycine dehydrogenase subunit 2 1845 65.25 0 1954635..1955552 - 305 87199871 - Saro_1854 - hypothetical protein 1846 65.10 0 1955559..1955813 + 84 87199872 - Saro_1855 - hypothetical protein 1847 64.24 0 1955826..1957391 - 521 87199873 - Saro_1856 - type II secretion system protein E 1848 65.56 0 1957674..1958576 + 300 87199874 - Saro_1857 - hypothetical protein 1849 67.26 0 1958674..1959516 - 280 87199875 - Saro_1858 - haloacid dehalogenase-like hydrolase 1850 66.67 0 1959513..1960985 - 490 87199876 - Saro_1859 - pyruvate carboxyltransferase 1851 68.99 +1 1960982..1962316 - 444 87199877 - Saro_1860 - carbamoyl-phosphate synthase L chain, ATP-binding 1852 66.67 0 1962318..1962761 - 147 87199878 - Saro_1861 - biotin carboxyl carrier protein 1853 66.91 0 1962769..1963989 - 406 87199879 - Saro_1862 - hypothetical protein 1854 67.42 0 1964115..1964915 + 266 87199880 - Saro_1863 - IclR family transcriptional regulator 1855 66.96 0 1964998..1966011 + 337 87199881 - Saro_1864 - alcohol dehydrogenase 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0