version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 125 63.74 0 127423..128208 + 261 87198151 - Saro_0125 - hypothetical protein 126 66.67 0 128212..129159 - 315 87198152 - Saro_0126 - translation factor SUA5 127 64.81 0 129220..130938 + 572 87198153 - Saro_0127 - acyl-CoA dehydrogenase-like 128 66.30 0 130935..131750 + 271 87198154 - Saro_0128 - hypothetical protein 129 63.21 0 131784..133289 - 501 87198155 - Saro_0129 - L-sorbosone dehydrogenase 130 64.18 0 133354..133836 + 160 87198156 - Saro_0130 - putative GAF sensor protein 131 65.52 0 133981..134679 + 232 87198157 - Saro_0131 - 17 kDa surface antigen 132 61.30 -1 134788..135942 - 384 87198158 - Saro_0132 - long-chain acyl-CoA dehydrogenase 133 66.67 0 136094..137041 - 315 87198159 - Saro_0133 - chromosome segregation DNA-binding protein 134 61.90 -1 137038..137814 - 258 87198160 - Saro_0134 - chromosome segregation ATPase 135 60.75 -1 137811..138503 - 230 87198161 - Saro_0135 - methyltransferase GidB 136 65.81 0 138500..140359 - 619 87198162 - Saro_0136 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 137 68.34 0 140445..141758 - 437 87198163 trmE Saro_0137 - tRNA modification GTPase TrmE 138 60.92 -1 141791..142051 - 86 87198164 - Saro_0138 - hypothetical protein 139 61.66 -1 142162..142860 + 232 87198165 - Saro_0139 - carboxymethylenebutenolidase 140 60.72 -1 142956..143342 + 128 87198166 - Saro_0140 - hypothetical protein 141 66.38 0 143400..143744 - 114 87198167 - Saro_0141 - DNA-directed RNA polymerase subunit omega 142 65.21 0 143844..145358 - 504 87198168 - Saro_0142 - replicative DNA helicase 143 60.61 -1 145505..145999 + 164 87198169 - Saro_0143 - hypothetical protein 144 66.81 0 146028..146723 + 231 87198170 - Saro_0144 - glycoside hydrolase family protein 145 67.81 0 146720..147157 + 145 87198171 - Saro_0145 - cytidine deaminase 146 60.72 -1 147206..147760 + 184 87198172 dcd Saro_0146 - deoxycytidine triphosphate deaminase 147 67.35 0 147894..149066 + 390 87198173 - Saro_0147 - saccharopine dehydrogenase 148 61.30 -1 149157..149603 - 148 87198174 - Saro_0148 - globin 149 64.88 0 149630..150133 + 167 87198175 - Saro_0149 - BadM/Rrf2 family transcriptional regulator 150 70.65 +1 150130..150531 - 133 87198176 - Saro_0150 - hypothetical protein 151 66.87 0 150718..151713 + 331 87198177 - Saro_0151 - PfkB 152 67.35 0 151725..153050 - 441 87198178 - Saro_0152 - aminopeptidase P 153 64.34 0 153225..153653 - 142 87198179 - Saro_0153 - signal-transduction protein 154 61.22 -1 153797..154090 + 97 87198180 - Saro_0154 - hypothetical protein 155 67.68 0 154071..154466 + 131 87198181 - Saro_0155 - HesB/YadR/YfhF 156 62.69 0 154525..155304 + 259 87198182 - Saro_0156 - exodeoxyribonuclease III 157 65.90 0 155351..155611 + 86 87198183 - Saro_0157 - hypothetical protein 158 64.90 0 155613..156290 + 225 87198184 - Saro_0158 - methionine sulfoxide reductase A 159 63.69 0 156327..156797 + 156 87198185 - Saro_0159 - transcriptional regulator 160 66.20 0 156827..158104 + 425 87198186 - Saro_0160 - general substrate transporter 161 65.16 0 158147..160069 + 640 87198187 - Saro_0161 - 1-deoxy-D-xylulose-5-phosphate synthase 162 62.70 0 160099..160779 - 226 87198188 - Saro_0162 - NnrU 163 62.85 0 160892..163015 - 707 87198189 - Saro_0163 - amino acid/peptide transporter 164 64.36 0 163049..163438 + 129 87198190 - Saro_0164 - GntR family transcriptional regulator 165 63.48 0 163591..163872 + 93 87198191 - Saro_0165 - histone-like DNA-binding protein 166 63.62 0 164436..165092 + 218 87198192 - Saro_0166 - hypothetical protein 167 64.49 0 165119..166585 - 488 87198193 - Saro_0167 - sulfotransferase 168 62.23 0 166719..169919 - 1066 87198194 - Saro_0168 - TonB-dependent receptor 169 68.07 0 170278..171132 - 284 87198195 - Saro_0169 - peptidase M23B 170 63.73 0 171151..171354 - 67 87198196 - Saro_0170 - hypothetical protein 171 70.19 +1 171381..172742 - 453 87198197 - Saro_0171 - exodeoxyribonuclease VII large subunit 172 65.50 0 172861..174150 + 429 87198198 - Saro_0172 - phosphoribosylamine--glycine ligase 173 65.08 0 174140..174769 - 209 87198199 - Saro_0173 - isochorismatase hydrolase 174 65.75 0 174769..175971 - 400 87198200 - Saro_0174 - succinyl-CoA:(R)-citramalate CoA-transferase 175 63.91 0 175968..177854 - 628 87198201 - Saro_0175 - 5-oxoprolinase (ATP-hydrolyzing) 176 66.18 0 177868..179916 - 682 87198202 - Saro_0176 - 5-oxoprolinase (ATP-hydrolyzing) 177 68.85 +1 179921..180835 - 304 87198203 - Saro_0177 - hydroxymethylglutaryl-CoA lyase 178 63.58 0 181101..183626 + 841 87198204 - Saro_0178 - TonB-dependent receptor 179 65.74 0 183684..184328 + 214 87198205 - Saro_0179 - GntR family transcriptional regulator 180 61.48 -1 184339..184839 - 166 87198206 - Saro_0180 - hemerythrin HHE cation binding region protein 181 67.04 0 184945..185745 + 266 87198207 - Saro_0181 - phosphoglycerate/bisphosphoglycerate mutase 182 70.41 +1 185738..186619 + 293 87198208 - Saro_0182 - hypothetical protein 183 65.63 0 186588..186974 - 128 87198209 - Saro_0183 - ferredoxin-like 184 66.24 0 186971..189067 - 698 87198210 - Saro_0184 - peptidase S9, prolyl oligopeptidase active site region 185 64.84 0 189125..189562 - 145 87198211 - Saro_0185 - hypothetical protein 186 68.04 0 189604..191061 - 485 87198212 - Saro_0186 - Type I secretion outer membrane protein, TolC 187 69.36 +1 191067..191660 - 197 87198213 - Saro_0187 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 188 65.03 0 191828..193351 + 507 87198214 - Saro_0188 - fumarase 189 68.12 0 193439..195367 + 642 87198215 - Saro_0189 - histidine kinase internal region 190 68.03 0 195378..196112 + 244 87198216 - Saro_0190 - LytR/AlgR family transcriptional regulator 191 64.41 0 196166..197983 - 605 87198217 - Saro_0191 - AMP-dependent synthetase and ligase 192 69.63 +1 198104..199855 - 583 87198218 - Saro_0192 - gamma-glutamyltransferase 1 193 68.29 0 199866..200915 - 349 87198219 - Saro_0193 - dihydroorotate dehydrogenase 2 194 69.61 +1 201349..201789 + 146 87198220 - Saro_0194 - BadM/Rrf2 family transcriptional regulator 195 62.69 0 201786..203267 + 493 87198221 - Saro_0195 - cysteine desulfurase activator complex subunit SufB 196 68.20 0 203407..203928 + 173 87198222 - Saro_0196 - hypothetical protein 197 64.38 0 203940..204683 + 247 87198223 - Saro_0197 - FeS assembly ATPase SufC 198 68.57 +1 204680..205414 + 244 87198224 - Saro_0198 - SufBD 199 68.40 0 205411..206622 + 403 87198225 - Saro_0199 - SufS subfamily cysteine desulfurase 200 64.18 0 206619..207101 + 160 87198226 - Saro_0200 - hypothetical protein 201 65.29 0 207125..207487 + 120 87198227 - Saro_0201 - HesB/YadR/YfhF 202 69.89 +1 208948..209598 - 216 87198228 - Saro_0203 - hypothetical protein 203 65.76 0 209688..211682 - 664 87198229 - Saro_0204 - threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase 204 66.78 0 212005..212925 + 306 87198230 - Saro_0205 - short-chain dehydrogenase/reductase SDR 205 67.87 0 213013..213429 + 138 87198231 - Saro_0206 - hypothetical protein 206 63.54 0 213426..213617 + 63 87198232 - Saro_0207 - XRE family transcriptional regulator 207 69.08 +1 213651..214397 + 248 87198233 - Saro_0208 - alpha/beta hydrolase 208 68.91 +1 214390..215325 + 311 87198234 - Saro_0209 - tetratricopeptide TPR_4 209 67.98 0 215322..216314 + 330 87198235 - Saro_0210 - luciferase-like 210 68.74 +1 216557..221278 + 1573 87198236 - Saro_0211 - glutamate dehydrogenase (NAD) 211 72.27 +2 221359..222126 + 255 87198237 - Saro_0212 - molybdenum ABC transporter, periplasmic molybdate-binding protein 212 70.28 +1 222107..222826 + 239 87198238 - Saro_0213 - molybdate ABC transporter permease 213 70.61 +1 222816..223424 + 202 87198239 - Saro_0214 - ABC transporter related 214 66.98 0 223426..224685 - 419 87198240 - Saro_0215 - 6-aminohexanoate-dimer hydrolase 215 67.07 0 224840..226087 + 415 87198241 - Saro_0216 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 216 68.95 +1 226099..227148 - 349 87198242 - Saro_0217 - 4Fe-4S ferredoxin, iron-sulfur binding 217 68.18 0 227195..228184 + 329 87198243 - Saro_0218 - ABC transporter related 218 67.31 0 228181..229425 + 414 87198244 - Saro_0219 - ABC-type Na+ efflux pump permease component-like 219 64.80 0 229503..230840 + 445 87198245 - Saro_0220 - cytochrome P450 220 69.31 +1 230975..231466 + 163 87198246 - Saro_0221 - protein-methionine-S-oxide reductase 221 61.40 -1 231568..231852 - 94 87198247 rpmB Saro_0222 - 50S ribosomal protein L28 222 72.37 +2 231976..232431 + 151 87198248 - Saro_0223 - tRNA-adenosine deaminase 223 70.51 +1 232442..233143 - 233 87198249 - Saro_0224 - ribonuclease T2 224 65.01 0 233145..233567 - 140 87198250 - Saro_0225 - hypothetical protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.