version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1499 59.00 -1 1552191..1552529 + 112 87199525 - Saro_1507 - hypothetical protein 1500 58.45 -2 1552530..1552967 - 145 87199526 - Saro_1508 - hypothetical protein 1501 57.95 -2 1553048..1553437 - 129 87199527 - Saro_1509 - hypothetical protein 1502 60.59 -1 1553514..1554188 - 224 87199528 - Saro_1510 - two component transcriptional regulator 1503 64.93 0 1554185..1555621 - 478 87199529 - Saro_1511 - periplasmic sensor signal transduction histidine kinase 1504 61.89 -1 1555630..1557534 - 634 87199530 - Saro_1512 - K+ potassium transporter 1505 59.10 -1 1557945..1558790 - 281 87199531 - Saro_1513 - hypothetical protein 1506 57.14 -2 1559005..1559424 - 139 87199532 - Saro_1514 - hypothetical protein 1507 62.20 0 1559822..1560604 + 260 87199533 - Saro_1515 - Flp pilus assembly CpaB 1508 60.55 -1 1560594..1562147 + 517 87199534 - Saro_1516 - type II and III secretion system protein 1509 61.46 -1 1562137..1562424 + 95 87199535 - Saro_1517 - hypothetical protein 1510 59.95 -1 1562441..1564003 + 520 87199536 - Saro_1518 - hypothetical protein 1511 61.42 -1 1564000..1564533 + 177 87199537 - Saro_1519 - TadE-like 1512 56.67 -2 1564530..1565159 + 209 87199538 - Saro_1520 - TadE-like 1513 59.40 -1 1565208..1566404 + 398 87199539 - Saro_1521 - Flp pilus assembly protein ATPase CpaE-like 1514 59.33 -1 1566401..1567804 + 467 87199540 - Saro_1522 - type II secretion system protein E 1515 59.37 -1 1567809..1568795 + 328 87199541 - Saro_1523 - type II secretion system protein 1516 58.93 -1 1568798..1569766 + 322 87199542 - Saro_1524 - type II secretion system protein 1517 59.70 -1 1569771..1570430 + 219 87199543 - Saro_1525 - TPR repeat-containing protein 1518 58.23 -2 1570451..1570924 + 157 87199544 - Saro_1526 - peptidase A24A, prepilin type IV 1519 47.80 -2 1570927..1571700 - 257 87199545 - Saro_1527 - regulatory proteins, IclR 1520 62.31 0 1571775..1572164 - 129 87199546 - Saro_1528 - IS4 family transposase 1521 62.93 0 1572185..1572532 - 115 87199547 - Saro_1529 - IS5 family transposase 1522 58.16 -2 1573114..1574736 - 540 87199548 - Saro_1530 - flavin-containing monooxygenase FMO 1523 63.66 0 1574831..1576426 - 531 87199549 - Saro_1531 - acyl-CoA synthetase 1524 59.35 -1 1576437..1577201 - 254 87199550 - Saro_1532 - enoyl-CoA hydratase 1525 58.90 -1 1577488..1579650 + 720 87199551 - Saro_1533 - TonB-dependent receptor 1526 61.47 -1 1579840..1580724 - 294 87199552 - Saro_1534 - alpha/beta hydrolase 1527 61.11 -1 1580914..1582263 + 449 87199553 - Saro_1535 - major facilitator transporter 1528 66.67 0 1582448..1583209 + 253 87199554 - Saro_1536 - hypothetical protein 1529 64.76 0 1583247..1584665 + 472 87199555 - Saro_1537 - hypothetical protein 1530 63.45 0 1584662..1587898 + 1078 87199556 - Saro_1538 - DNA polymerase III, alpha subunit 1531 64.86 0 1587982..1589310 - 442 87199557 - Saro_1539 - FAD dependent oxidoreductase 1532 63.94 0 1589321..1590565 - 414 87199558 - Saro_1540 - major facilitator transporter 1533 62.33 0 1590650..1591225 + 191 87199559 - Saro_1541 - TetR family transcriptional regulator 1534 62.86 0 1591258..1593597 - 779 87199560 - Saro_1542 - TonB-dependent receptor 1535 64.03 0 1593855..1595447 + 530 87199561 - Saro_1543 - glucose-methanol-choline oxidoreductase 1536 66.30 0 1598538..1599911 + 457 87199562 - Saro_1545 - major facilitator transporter 1537 62.78 0 1599944..1600894 + 316 87199563 - Saro_1546 - taurine dioxygenase 1538 61.84 -1 1601033..1601923 - 296 87199564 - Saro_1547 - RpiR family transcriptional regulator 1539 60.98 -1 1602156..1604336 + 726 87199565 - Saro_1548 - TonB-dependent receptor 1540 63.62 0 1604434..1605384 + 316 87199566 - Saro_1549 - phosphonate-binding periplasmic protein 1541 65.15 0 1605381..1606103 + 240 87199567 - Saro_1550 - ABC transporter related 1542 65.62 0 1606100..1607053 + 317 87199568 - Saro_1551 - phosphonate ABC transporter permease 1543 64.15 0 1607077..1609185 + 702 87199569 - Saro_1552 - twin-arginine translocation pathway signal 1544 62.95 0 1609227..1610573 - 448 87199570 - Saro_1553 - putative GAF sensor protein 1545 64.83 0 1610570..1611058 - 162 87199571 - Saro_1554 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1546 61.90 -1 1611187..1612068 + 293 87199572 - Saro_1555 - N-acetyltransferase 1547 64.02 0 1612093..1612620 + 175 87199573 - Saro_1556 - hypothetical protein 1548 60.50 -1 1612743..1613537 + 264 87199574 - Saro_1557 - transcriptional regulator, putative 1549 63.26 0 1613598..1615301 - 567 87199575 - Saro_1558 - flavin-containing monooxygenase FMO 1550 63.11 0 1615327..1617519 - 730 87199576 - Saro_1559 - TonB-dependent receptor 1551 65.25 0 1617712..1618485 - 257 87199577 - Saro_1560 - short-chain dehydrogenase/reductase SDR 1552 67.05 0 1618665..1620215 + 516 87199578 - Saro_1561 - short chain dehydrogenase 1553 63.66 0 1620330..1621094 + 254 87199579 - Saro_1562 - enoyl-CoA hydratase 1554 65.85 0 1621111..1622706 + 531 87199580 - Saro_1563 - acyl-CoA synthetase 1555 70.03 +1 1622710..1623423 + 237 87199581 - Saro_1564 - short-chain dehydrogenase/reductase SDR 1556 69.75 +1 1623417..1623935 + 172 87199582 - Saro_1565 - short chain dehydrogenase/reductase family oxidoreductase 1557 62.11 0 1623987..1624754 + 255 87199583 - Saro_1566 - IclR family transcriptional regulator 1558 64.07 0 1624862..1625746 + 294 87199584 - Saro_1567 - senescence marker protein-30 (SMP-30) 1559 64.81 0 1625751..1626938 + 395 87199585 - Saro_1568 - acyl-CoA dehydrogenase-like 1560 65.77 0 1626947..1628056 + 369 87199586 - Saro_1569 - acyl-CoA dehydrogenase-like 1561 65.90 0 1628053..1628577 + 174 87199587 - Saro_1570 - hypothetical protein 1562 66.15 0 1628596..1629372 + 258 87199588 - Saro_1571 - hypothetical protein 1563 67.86 0 1629369..1630460 - 363 87199589 - Saro_1572 - NADH:flavin oxidoreductase/NADH oxidase 1564 64.29 0 1630555..1630848 - 97 87199590 - Saro_1573 - tellurite resistance-like domain-containing protein 1565 60.94 -1 1630845..1631228 - 127 87199591 - Saro_1574 - SEC-independent protein translocase protein TatC 1566 64.08 0 1631230..1631577 - 115 87199592 - Saro_1575 - hypothetical protein 1567 63.62 0 1631614..1632303 - 229 87199593 - Saro_1576 - alternative oxidase 1568 66.41 0 1632386..1633933 + 515 87199594 - Saro_1577 - multi-sensor signal transduction histidine kinase 1569 65.22 0 1633923..1634546 + 207 87199595 - Saro_1578 - two component LuxR family transcriptional regulator 1570 65.98 0 1634560..1635861 - 433 87199596 - Saro_1579 - acetyl-CoA hydrolase/transferase 1571 65.64 0 1636020..1637672 + 550 87199597 - Saro_1580 - fumarate reductase/succinate dehydrogenase flavoprotein-like 1572 62.45 0 1638057..1638317 - 86 87199598 - Saro_1581 - hypothetical protein 1573 63.84 0 1638340..1639614 - 424 87199599 - Saro_1582 - GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase 1574 65.36 0 1640051..1641124 - 357 87199600 - Saro_1583 - hypothetical protein 1575 67.94 0 1641127..1642695 - 522 87199601 - Saro_1584 - carboxylesterase, type B 1576 67.49 0 1642692..1643663 - 323 87199602 - Saro_1585 - dienelactone hydrolase 1577 65.92 0 1643707..1645572 - 621 87199603 - Saro_1586 - 4-hydroxyphenylpyruvate dioxygenase 1578 64.45 0 1645775..1646542 + 255 87199604 - Saro_1587 - TetR family transcriptional regulator 1579 68.37 0 1646637..1647869 + 410 87199605 - Saro_1588 - major facilitator transporter 1580 64.43 0 1647915..1650911 + 998 87199606 - Saro_1589 - TonB-dependent receptor 1581 66.79 0 1650970..1651800 + 276 87199607 - Saro_1590 - shikimate 5-dehydrogenase 1582 67.97 0 1651802..1652491 - 229 87199608 - Saro_1591 - putative transmembrane transcriptional regulator (anti-sigma factor) 1583 66.14 0 1652488..1653054 - 188 87199609 - Saro_1592 - sigma-24 (FecI-like) 1584 68.51 +1 1653118..1654308 + 396 87199610 - Saro_1593 - peptidase S8 and S53, subtilisin, kexin, sedolisin 1585 70.25 +1 1654437..1655300 + 287 87199611 - Saro_1594 - hypothetical protein 1586 67.51 0 1655345..1658650 - 1101 87199612 - Saro_1595 - polysaccharide deacetylase 1587 68.16 0 1658647..1659384 - 245 87199613 - Saro_1596 - Type IV secretory pathway VirJ component-like 1588 66.78 0 1659381..1662014 - 877 87199614 - Saro_1597 - hypothetical protein 1589 64.37 0 1662011..1662445 - 144 87199615 - Saro_1598 - hypothetical protein 1590 65.07 0 1662598..1663284 + 228 87199616 - Saro_1599 - two component transcriptional regulator 1591 68.73 +1 1663284..1664690 + 468 87199617 - Saro_1600 - periplasmic sensor signal transduction histidine kinase 1592 66.14 0 1664720..1666051 - 443 87199618 - Saro_1601 - chromate transporter 1593 64.37 0 1666217..1667824 + 535 87199619 - Saro_1602 - beta-lactamase-like 1594 62.60 0 1667939..1670911 + 990 87199620 - Saro_1603 - TonB-dependent receptor 1595 67.38 0 1671027..1672568 + 513 87199621 - Saro_1604 - tryptophan halogenase 1596 67.63 0 1672565..1673287 + 240 87199622 - Saro_1605 - SapC 1597 66.76 0 1673271..1674287 + 338 87199623 - Saro_1606 - hypothetical protein 1598 64.69 0 1674284..1675801 + 505 87199624 - Saro_1607 - tryptophan halogenase 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0