version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1444 67.50 0 1494442..1496010 - 522 87199470 - Saro_1449 - resolvase-like protein 1445 68.80 +1 1496007..1496474 - 155 87199471 - Saro_1450 - hypothetical protein 1446 70.07 +1 1496474..1496884 - 136 87199472 - Saro_1451 - hypothetical protein 1447 66.82 0 1497036..1498343 + 435 87199473 - Saro_1452 - DNA methylase N-4/N-6 1448 64.78 0 1498340..1498870 + 176 87199474 - Saro_1453 - hypothetical protein 1449 69.71 +1 1498867..1499457 + 196 87199475 - Saro_1454 - hypothetical protein 1450 56.50 -2 1499809..1500054 + 81 87199476 - Saro_1456 - hypothetical protein 1451 64.72 0 1500172..1501404 + 410 87199477 - Saro_1457 - integrase 1452 64.57 0 1501401..1502258 + 285 87199478 - Saro_1458 - IstB-like ATP-binding protein 1453 60.33 -1 1502365..1502853 + 162 87199479 - Saro_1459 - IS6 family transposase 1454 60.68 -1 1502832..1503332 + 166 87199480 - Saro_1460 - transposase 1455 64.69 0 1503407..1503913 - 168 87199481 - Saro_1461 - hypothetical protein 1456 67.63 0 1503934..1504452 - 172 87199482 - Saro_1462 - flavin reductase-like, FMN-binding 1457 66.41 0 1504449..1505219 - 256 87199483 - Saro_1463 - short chain enoyl-CoA hydratase 1458 66.90 0 1505223..1506062 - 279 87199484 - Saro_1464 - enoyl-CoA hydratase/isomerase 1459 58.89 -1 1506059..1506508 - 149 87199485 - Saro_1465 - hypothetical protein 1460 62.27 0 1506540..1506812 + 90 87199486 - Saro_1466 - hypothetical protein 1461 65.44 0 1506861..1507511 + 216 87199487 - Saro_1467 - hypothetical protein 1462 60.76 -1 1507606..1508706 - 366 87199488 - Saro_1468 - luciferase-like 1463 59.83 -1 1508743..1509897 - 384 87199489 - Saro_1469 - luciferase-like 1464 61.08 -1 1510080..1511672 + 530 87199490 - Saro_1470 - AMP-dependent synthetase and ligase 1465 57.88 -2 1511678..1512337 - 219 87199491 - Saro_1471 - TetR family transcriptional regulator 1466 60.89 -1 1512739..1513257 + 172 87199492 - Saro_1472 - hypothetical protein 1467 59.84 -1 1513254..1514396 + 380 87199493 - Saro_1473 - GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase 1468 57.05 -2 1514632..1517085 + 817 87199494 - Saro_1474 - TonB-dependent receptor 1469 54.31 -2 1517212..1518012 + 266 87199495 - Saro_1475 - short-chain dehydrogenase/reductase SDR 1470 62.51 0 1518089..1519171 - 360 87199496 - Saro_1476 - alcohol dehydrogenase, zinc-containing 1471 61.71 -1 1519205..1519567 - 120 87199497 - Saro_1477 - ferredoxin 1472 60.93 -1 1519557..1520810 - 417 87199498 - Saro_1478 - cytochrome P450 1473 61.90 -1 1520981..1521694 + 237 87199499 - Saro_1479 - MerR family transcriptional regulator 1474 64.61 0 1521727..1523376 - 549 87199500 - Saro_1480 - cyclohexanone monooxygenase 1475 59.41 -1 1523603..1524319 + 238 87199501 - Saro_1481 - transposase 1476 56.22 -2 1524528..1525274 - 248 87199502 - Saro_1482 - XRE family transcriptional regulator 1477 58.40 -2 1525404..1526213 + 269 87199503 - Saro_1483 - phytanoyl-CoA dioxygenase 1478 56.18 -2 1526248..1526724 + 158 87199504 - Saro_1484 - hypothetical protein 1479 59.27 -1 1526794..1527510 + 238 87199505 - Saro_1485 - transposase 1480 55.37 -2 1527910..1528980 - 356 87199506 - Saro_1487 - Rieske (2Fe-2S) protein 1481 58.71 -2 1529171..1530226 - 351 87199507 - Saro_1488 - Rieske (2Fe-2S) protein 1482 57.64 -2 1530312..1532891 - 859 87199508 - Saro_1489 - TonB-dependent receptor 1483 62.59 0 1532918..1534144 - 408 87199509 - Saro_1490 - FAD linked oxidase-like 1484 62.42 0 1534155..1534484 - 109 87199510 - Saro_1491 - cytochrome c, class I 1485 60.51 -1 1534481..1536040 - 519 87199511 - Saro_1492 - vanillyl-alcohol oxidase 1486 62.14 0 1536037..1536588 - 183 87199512 - Saro_1493 - twin-arginine translocation pathway signal 1487 58.43 -2 1536757..1538481 - 574 87199513 - Saro_1494 - Fis family transcriptional regulator 1488 59.27 -1 1538674..1539390 + 238 87199514 - Saro_1495 - transposase 1489 64.38 0 1539881..1540711 - 276 87199515 - Saro_1497 - hypothetical protein 1490 61.57 -1 1540830..1542164 + 444 87199516 - Saro_1498 - di- and tricarboxylate transporters-like 1491 60.84 -1 1542170..1543456 - 428 87199517 - Saro_1499 - osmosensitive K+ channel histidine kinase-like 1492 62.52 0 1543701..1545002 + 433 87199518 - Saro_1500 - Cl- channel, voltage gated 1493 59.40 -1 1545008..1545943 - 311 87199519 - Saro_1501 - LysR family transcriptional regulator 1494 63.72 0 1546358..1546900 + 180 87199520 - Saro_1502 - hypothetical protein 1495 64.14 0 1547027..1547737 + 236 87199521 - Saro_1503 - HAD family hydrolase 1496 65.15 0 1547734..1549518 + 594 87199522 - Saro_1504 - glycoside hydrolase 15-related 1497 62.01 -1 1549515..1550909 + 464 87199523 - Saro_1505 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) 1498 60.67 -1 1551018..1551734 + 238 87199524 - Saro_1506 - transposase 1499 59.00 -1 1552191..1552529 + 112 87199525 - Saro_1507 - hypothetical protein 1500 58.45 -2 1552530..1552967 - 145 87199526 - Saro_1508 - hypothetical protein 1501 57.95 -2 1553048..1553437 - 129 87199527 - Saro_1509 - hypothetical protein 1502 60.59 -1 1553514..1554188 - 224 87199528 - Saro_1510 - two component transcriptional regulator 1503 64.93 0 1554185..1555621 - 478 87199529 - Saro_1511 - periplasmic sensor signal transduction histidine kinase 1504 61.89 -1 1555630..1557534 - 634 87199530 - Saro_1512 - K+ potassium transporter 1505 59.10 -1 1557945..1558790 - 281 87199531 - Saro_1513 - hypothetical protein 1506 57.14 -2 1559005..1559424 - 139 87199532 - Saro_1514 - hypothetical protein 1507 62.20 0 1559822..1560604 + 260 87199533 - Saro_1515 - Flp pilus assembly CpaB 1508 60.55 -1 1560594..1562147 + 517 87199534 - Saro_1516 - type II and III secretion system protein 1509 61.46 -1 1562137..1562424 + 95 87199535 - Saro_1517 - hypothetical protein 1510 59.95 -1 1562441..1564003 + 520 87199536 - Saro_1518 - hypothetical protein 1511 61.42 -1 1564000..1564533 + 177 87199537 - Saro_1519 - TadE-like 1512 56.67 -2 1564530..1565159 + 209 87199538 - Saro_1520 - TadE-like 1513 59.40 -1 1565208..1566404 + 398 87199539 - Saro_1521 - Flp pilus assembly protein ATPase CpaE-like 1514 59.33 -1 1566401..1567804 + 467 87199540 - Saro_1522 - type II secretion system protein E 1515 59.37 -1 1567809..1568795 + 328 87199541 - Saro_1523 - type II secretion system protein 1516 58.93 -1 1568798..1569766 + 322 87199542 - Saro_1524 - type II secretion system protein 1517 59.70 -1 1569771..1570430 + 219 87199543 - Saro_1525 - TPR repeat-containing protein 1518 58.23 -2 1570451..1570924 + 157 87199544 - Saro_1526 - peptidase A24A, prepilin type IV 1519 47.80 -2 1570927..1571700 - 257 87199545 - Saro_1527 - regulatory proteins, IclR 1520 62.31 0 1571775..1572164 - 129 87199546 - Saro_1528 - IS4 family transposase 1521 62.93 0 1572185..1572532 - 115 87199547 - Saro_1529 - IS5 family transposase 1522 58.16 -2 1573114..1574736 - 540 87199548 - Saro_1530 - flavin-containing monooxygenase FMO 1523 63.66 0 1574831..1576426 - 531 87199549 - Saro_1531 - acyl-CoA synthetase 1524 59.35 -1 1576437..1577201 - 254 87199550 - Saro_1532 - enoyl-CoA hydratase 1525 58.90 -1 1577488..1579650 + 720 87199551 - Saro_1533 - TonB-dependent receptor 1526 61.47 -1 1579840..1580724 - 294 87199552 - Saro_1534 - alpha/beta hydrolase 1527 61.11 -1 1580914..1582263 + 449 87199553 - Saro_1535 - major facilitator transporter 1528 66.67 0 1582448..1583209 + 253 87199554 - Saro_1536 - hypothetical protein 1529 64.76 0 1583247..1584665 + 472 87199555 - Saro_1537 - hypothetical protein 1530 63.45 0 1584662..1587898 + 1078 87199556 - Saro_1538 - DNA polymerase III, alpha subunit 1531 64.86 0 1587982..1589310 - 442 87199557 - Saro_1539 - FAD dependent oxidoreductase 1532 63.94 0 1589321..1590565 - 414 87199558 - Saro_1540 - major facilitator transporter 1533 62.33 0 1590650..1591225 + 191 87199559 - Saro_1541 - TetR family transcriptional regulator 1534 62.86 0 1591258..1593597 - 779 87199560 - Saro_1542 - TonB-dependent receptor 1535 64.03 0 1593855..1595447 + 530 87199561 - Saro_1543 - glucose-methanol-choline oxidoreductase 1536 66.30 0 1598538..1599911 + 457 87199562 - Saro_1545 - major facilitator transporter 1537 62.78 0 1599944..1600894 + 316 87199563 - Saro_1546 - taurine dioxygenase 1538 61.84 -1 1601033..1601923 - 296 87199564 - Saro_1547 - RpiR family transcriptional regulator 1539 60.98 -1 1602156..1604336 + 726 87199565 - Saro_1548 - TonB-dependent receptor 1540 63.62 0 1604434..1605384 + 316 87199566 - Saro_1549 - phosphonate-binding periplasmic protein 1541 65.15 0 1605381..1606103 + 240 87199567 - Saro_1550 - ABC transporter related 1542 65.62 0 1606100..1607053 + 317 87199568 - Saro_1551 - phosphonate ABC transporter permease 1543 64.15 0 1607077..1609185 + 702 87199569 - Saro_1552 - twin-arginine translocation pathway signal 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0