version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 101 63.76 0 104030..105130 + 366 87198127 - Saro_0101 - myo-inositol-1-phosphate synthase 102 66.53 0 105225..105974 + 249 87198128 - Saro_0102 - nucleotidyl transferase 103 64.24 0 106017..106511 - 164 87198129 - Saro_0103 - hypothetical protein 104 64.09 0 106888..107547 + 219 87198130 - Saro_0104 - ribulose-5-phosphate 3-epimerase 105 67.73 0 107549..109435 + 628 87198131 - Saro_0105 - heparinase II/III-like 106 65.79 0 109446..111035 + 529 87198132 purH Saro_0106 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 107 67.01 0 111131..112870 + 579 87198133 - Saro_0107 - CBS 108 62.38 0 112945..113574 - 209 87198134 - Saro_0108 - cell wall hydrolase, SleB 109 54.09 -2 113790..114131 - 113 87198135 - Saro_0109 - hypothetical protein 110 66.25 0 114133..114615 - 160 87198136 - Saro_0110 - phenylacetic acid degradation-related protein 111 65.37 0 114602..115063 - 153 87198137 - Saro_0111 - PTS IIA-like nitrogen-regulatory protein PtsN 112 61.86 -1 115237..115818 - 193 87198138 - Saro_0112 - SSU ribosomal protein S30P / sigma 54 modulation protein 113 64.07 0 115877..116569 - 230 87198139 - Saro_0113 - DNA polymerase III, epsilon subunit 114 65.18 0 116615..117220 - 201 87198140 - Saro_0114 - dephospho-CoA kinase 115 64.15 0 117217..118089 - 290 87198141 - Saro_0115 - shikimate dehydrogenase 116 62.07 -1 118086..118673 - 195 87198142 - Saro_0116 - Maf-like protein 117 60.85 -1 118670..119512 - 280 87198143 - Saro_0117 - hypothetical protein 118 63.26 0 119850..120875 + 341 87198144 - Saro_0118 - uroporphyrinogen decarboxylase 119 58.45 -2 120973..121398 + 141 87198145 - Saro_0119 - hypothetical protein 120 60.78 -1 121800..123056 + 418 87198146 rho Saro_0120 - transcription termination factor Rho 121 65.77 0 123162..125729 + 855 87198147 - Saro_0121 - helicase-like 122 64.26 0 125747..126037 + 96 87198148 - Saro_0122 - RNA-binding S4 123 60.47 -1 126051..126389 + 112 87198149 - Saro_0123 - 4Fe-4S ferredoxin, iron-sulfur binding 124 60.38 -1 126726..127250 + 174 87198150 - Saro_0124 - CarD family transcriptional regulator 125 63.74 0 127423..128208 + 261 87198151 - Saro_0125 - hypothetical protein 126 66.67 0 128212..129159 - 315 87198152 - Saro_0126 - translation factor SUA5 127 64.81 0 129220..130938 + 572 87198153 - Saro_0127 - acyl-CoA dehydrogenase-like 128 66.30 0 130935..131750 + 271 87198154 - Saro_0128 - hypothetical protein 129 63.21 0 131784..133289 - 501 87198155 - Saro_0129 - L-sorbosone dehydrogenase 130 64.18 0 133354..133836 + 160 87198156 - Saro_0130 - putative GAF sensor protein 131 65.52 0 133981..134679 + 232 87198157 - Saro_0131 - 17 kDa surface antigen 132 61.30 -1 134788..135942 - 384 87198158 - Saro_0132 - long-chain acyl-CoA dehydrogenase 133 66.67 0 136094..137041 - 315 87198159 - Saro_0133 - chromosome segregation DNA-binding protein 134 61.90 -1 137038..137814 - 258 87198160 - Saro_0134 - chromosome segregation ATPase 135 60.75 -1 137811..138503 - 230 87198161 - Saro_0135 - methyltransferase GidB 136 65.81 0 138500..140359 - 619 87198162 - Saro_0136 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 137 68.34 0 140445..141758 - 437 87198163 trmE Saro_0137 - tRNA modification GTPase TrmE 138 60.92 -1 141791..142051 - 86 87198164 - Saro_0138 - hypothetical protein 139 61.66 -1 142162..142860 + 232 87198165 - Saro_0139 - carboxymethylenebutenolidase 140 60.72 -1 142956..143342 + 128 87198166 - Saro_0140 - hypothetical protein 141 66.38 0 143400..143744 - 114 87198167 - Saro_0141 - DNA-directed RNA polymerase subunit omega 142 65.21 0 143844..145358 - 504 87198168 - Saro_0142 - replicative DNA helicase 143 60.61 -1 145505..145999 + 164 87198169 - Saro_0143 - hypothetical protein 144 66.81 0 146028..146723 + 231 87198170 - Saro_0144 - glycoside hydrolase family protein 145 67.81 0 146720..147157 + 145 87198171 - Saro_0145 - cytidine deaminase 146 60.72 -1 147206..147760 + 184 87198172 dcd Saro_0146 - deoxycytidine triphosphate deaminase 147 67.35 0 147894..149066 + 390 87198173 - Saro_0147 - saccharopine dehydrogenase 148 61.30 -1 149157..149603 - 148 87198174 - Saro_0148 - globin 149 64.88 0 149630..150133 + 167 87198175 - Saro_0149 - BadM/Rrf2 family transcriptional regulator 150 70.65 +1 150130..150531 - 133 87198176 - Saro_0150 - hypothetical protein 151 66.87 0 150718..151713 + 331 87198177 - Saro_0151 - PfkB 152 67.35 0 151725..153050 - 441 87198178 - Saro_0152 - aminopeptidase P 153 64.34 0 153225..153653 - 142 87198179 - Saro_0153 - signal-transduction protein 154 61.22 -1 153797..154090 + 97 87198180 - Saro_0154 - hypothetical protein 155 67.68 0 154071..154466 + 131 87198181 - Saro_0155 - HesB/YadR/YfhF 156 62.69 0 154525..155304 + 259 87198182 - Saro_0156 - exodeoxyribonuclease III 157 65.90 0 155351..155611 + 86 87198183 - Saro_0157 - hypothetical protein 158 64.90 0 155613..156290 + 225 87198184 - Saro_0158 - methionine sulfoxide reductase A 159 63.69 0 156327..156797 + 156 87198185 - Saro_0159 - transcriptional regulator 160 66.20 0 156827..158104 + 425 87198186 - Saro_0160 - general substrate transporter 161 65.16 0 158147..160069 + 640 87198187 - Saro_0161 - 1-deoxy-D-xylulose-5-phosphate synthase 162 62.70 0 160099..160779 - 226 87198188 - Saro_0162 - NnrU 163 62.85 0 160892..163015 - 707 87198189 - Saro_0163 - amino acid/peptide transporter 164 64.36 0 163049..163438 + 129 87198190 - Saro_0164 - GntR family transcriptional regulator 165 63.48 0 163591..163872 + 93 87198191 - Saro_0165 - histone-like DNA-binding protein 166 63.62 0 164436..165092 + 218 87198192 - Saro_0166 - hypothetical protein 167 64.49 0 165119..166585 - 488 87198193 - Saro_0167 - sulfotransferase 168 62.23 0 166719..169919 - 1066 87198194 - Saro_0168 - TonB-dependent receptor 169 68.07 0 170278..171132 - 284 87198195 - Saro_0169 - peptidase M23B 170 63.73 0 171151..171354 - 67 87198196 - Saro_0170 - hypothetical protein 171 70.19 +1 171381..172742 - 453 87198197 - Saro_0171 - exodeoxyribonuclease VII large subunit 172 65.50 0 172861..174150 + 429 87198198 - Saro_0172 - phosphoribosylamine--glycine ligase 173 65.08 0 174140..174769 - 209 87198199 - Saro_0173 - isochorismatase hydrolase 174 65.75 0 174769..175971 - 400 87198200 - Saro_0174 - succinyl-CoA:(R)-citramalate CoA-transferase 175 63.91 0 175968..177854 - 628 87198201 - Saro_0175 - 5-oxoprolinase (ATP-hydrolyzing) 176 66.18 0 177868..179916 - 682 87198202 - Saro_0176 - 5-oxoprolinase (ATP-hydrolyzing) 177 68.85 +1 179921..180835 - 304 87198203 - Saro_0177 - hydroxymethylglutaryl-CoA lyase 178 63.58 0 181101..183626 + 841 87198204 - Saro_0178 - TonB-dependent receptor 179 65.74 0 183684..184328 + 214 87198205 - Saro_0179 - GntR family transcriptional regulator 180 61.48 -1 184339..184839 - 166 87198206 - Saro_0180 - hemerythrin HHE cation binding region protein 181 67.04 0 184945..185745 + 266 87198207 - Saro_0181 - phosphoglycerate/bisphosphoglycerate mutase 182 70.41 +1 185738..186619 + 293 87198208 - Saro_0182 - hypothetical protein 183 65.63 0 186588..186974 - 128 87198209 - Saro_0183 - ferredoxin-like 184 66.24 0 186971..189067 - 698 87198210 - Saro_0184 - peptidase S9, prolyl oligopeptidase active site region 185 64.84 0 189125..189562 - 145 87198211 - Saro_0185 - hypothetical protein 186 68.04 0 189604..191061 - 485 87198212 - Saro_0186 - Type I secretion outer membrane protein, TolC 187 69.36 +1 191067..191660 - 197 87198213 - Saro_0187 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 188 65.03 0 191828..193351 + 507 87198214 - Saro_0188 - fumarase 189 68.12 0 193439..195367 + 642 87198215 - Saro_0189 - histidine kinase internal region 190 68.03 0 195378..196112 + 244 87198216 - Saro_0190 - LytR/AlgR family transcriptional regulator 191 64.41 0 196166..197983 - 605 87198217 - Saro_0191 - AMP-dependent synthetase and ligase 192 69.63 +1 198104..199855 - 583 87198218 - Saro_0192 - gamma-glutamyltransferase 1 193 68.29 0 199866..200915 - 349 87198219 - Saro_0193 - dihydroorotate dehydrogenase 2 194 69.61 +1 201349..201789 + 146 87198220 - Saro_0194 - BadM/Rrf2 family transcriptional regulator 195 62.69 0 201786..203267 + 493 87198221 - Saro_0195 - cysteine desulfurase activator complex subunit SufB 196 68.20 0 203407..203928 + 173 87198222 - Saro_0196 - hypothetical protein 197 64.38 0 203940..204683 + 247 87198223 - Saro_0197 - FeS assembly ATPase SufC 198 68.57 +1 204680..205414 + 244 87198224 - Saro_0198 - SufBD 199 68.40 0 205411..206622 + 403 87198225 - Saro_0199 - SufS subfamily cysteine desulfurase 200 64.18 0 206619..207101 + 160 87198226 - Saro_0200 - hypothetical protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.