version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1392 64.38 0 1440684..1440989 - 101 87199418 - Saro_1397 - outer membrane protein 1393 62.48 0 1441218..1441790 - 190 87199419 - Saro_1398 - hypothetical protein 1394 61.82 -1 1441908..1442567 - 219 87199420 - Saro_1399 - intracellular septation protein A 1395 67.10 0 1442564..1443490 - 308 87199421 - Saro_1400 - signal recognition particle-docking protein FtsY 1396 65.58 0 1443487..1444683 - 398 87199422 - Saro_1401 - MiaB-like tRNA modifying enzyme 1397 66.55 0 1444680..1445507 - 275 87199423 - Saro_1402 - diaminopimelate epimerase 1398 64.38 0 1445564..1447267 - 567 87199424 - Saro_1403 - diguanylate cyclase/phosphodiesterase 1399 66.06 0 1447540..1449015 + 491 87199425 - Saro_1404 - signal recognition particle subunit FFH/SRP54 (srp54) 1400 67.12 0 1449064..1449501 + 145 87199426 rpsP Saro_1405 - 30S ribosomal protein S16 1401 65.87 0 1449504..1450004 + 166 87199427 - Saro_1406 - 16S rRNA processing protein RimM 1402 65.72 0 1450001..1450741 + 246 87199428 - Saro_1407 - tRNA (Guanine37-N1) methyltransferase 1403 60.98 -1 1450745..1451113 + 122 87199429 rplS Saro_1408 - 50S ribosomal protein L19 1404 64.37 0 1451278..1453542 + 754 87199430 - Saro_1409 - dipeptidyl-peptidase IV 1405 62.67 0 1453782..1454807 + 341 87199431 - Saro_1410 - aspartate-semialdehyde dehydrogenase 1406 65.08 0 1454816..1455571 + 251 87199432 - Saro_1411 - alpha/beta hydrolase 1407 60.59 -1 1455670..1456146 + 158 87199433 - Saro_1412 - hypothetical protein 1408 66.26 0 1456240..1457724 - 494 87199434 - Saro_1413 - AMP nucleosidase 1409 62.83 0 1457796..1458395 - 199 87199435 rplI Saro_1414 - 50S ribosomal protein L9 1410 62.67 0 1458408..1458632 - 74 87199436 rpsR Saro_1415 - 30S ribosomal protein S18 1411 62.53 0 1458636..1458998 - 120 87199437 rpsF Saro_1416 - 30S ribosomal protein S6 1412 68.21 0 1459207..1459983 + 258 87199438 - Saro_1417 - enoyl-CoA hydratase 1413 67.37 0 1460006..1460431 + 141 87199439 - Saro_1418 - putative hydroxylaminobenzene mutase HAB 1414 66.41 0 1460403..1461563 - 386 87199440 - Saro_1419 - acyltransferase 3 1415 64.58 0 1461592..1461879 - 95 87199441 - Saro_1420 - antibiotic biosynthesis monooxygenase 1416 65.70 0 1462057..1464231 + 724 87199442 - Saro_1421 - diguanylate cyclase/phosphodiesterase 1417 66.46 0 1464323..1465267 + 314 87199443 - Saro_1422 - hypothetical protein 1418 63.11 0 1465280..1465645 - 121 87199444 - Saro_1423 - hypothetical protein 1419 64.98 0 1465845..1466378 + 177 87199445 - Saro_1424 - GCN5-related N-acetyltransferase 1420 65.83 0 1466398..1467825 - 475 87199446 - Saro_1425 - UDP-N-acetylmuramate--L-alanine ligase 1421 65.33 0 1467912..1468733 + 273 87199447 - Saro_1426 - peptidase U61, LD-carboxypeptidase A 1422 65.71 0 1468791..1469726 + 311 87199448 - Saro_1427 - [Acyl-carrier-protein] S-malonyltransferase 1423 65.62 0 1469732..1470496 + 254 87199449 - Saro_1428 - 3-oxoacyl-[acyl-carrier-protein] reductase 1424 62.77 0 1470682..1471809 + 375 87199450 - Saro_1429 - DNA polymerase III subunit beta 1425 63.55 0 1471981..1473426 + 481 87199451 - Saro_1430 - methyl-accepting chemotaxis sensory transducer 1426 64.69 0 1473435..1474448 - 337 87199452 - Saro_1431 - alcohol dehydrogenase 1427 63.87 0 1474448..1476196 - 582 87199453 - Saro_1432 - hypothetical protein 1428 64.60 0 1476300..1477604 - 434 87199454 - Saro_1433 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1429 63.74 0 1477676..1478461 - 261 87199455 - Saro_1434 - alpha/beta hydrolase 1430 63.58 0 1478581..1481271 + 896 87199456 - Saro_1435 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1431 62.87 0 1481281..1482570 - 429 87199457 - Saro_1436 - hypothetical protein 1432 62.05 -1 1482804..1483475 + 223 87199458 - Saro_1437 - hypothetical protein 1433 66.27 0 1483542..1484039 - 165 87199459 - Saro_1438 - hypothetical protein 1434 62.05 -1 1484036..1484230 - 64 87199460 - Saro_1439 - hypothetical protein 1435 63.49 0 1484230..1484859 - 209 87199461 - Saro_1440 - phosphoglycerate/bisphosphoglycerate mutase 1436 64.48 0 1484877..1485425 - 182 87199462 - Saro_1441 - GreA/GreB family elongation factor 1437 65.92 0 1485464..1487482 - 672 87199463 - Saro_1442 - lytic transglycosylase, catalytic 1438 63.97 0 1487581..1488471 + 296 87199464 - Saro_1443 - dihydrodipicolinate synthase 1439 58.18 -2 1488542..1489024 + 160 87199465 smpB Saro_1444 - SsrA-binding protein 1440 65.95 0 1489133..1489693 + 186 87199466 - Saro_1445 - hypothetical protein 1441 63.42 0 1489693..1492128 + 811 87199467 - Saro_1446 - multi-sensor hybrid histidine kinase 1442 61.11 -1 1492505..1492810 - 101 87199468 - Saro_1447 - hypothetical protein 1443 62.34 0 1492815..1493807 - 330 87199469 - Saro_1448 - peptidyl-prolyl cis-trans isomerase 1444 67.50 0 1494442..1496010 - 522 87199470 - Saro_1449 - resolvase-like protein 1445 68.80 +1 1496007..1496474 - 155 87199471 - Saro_1450 - hypothetical protein 1446 70.07 +1 1496474..1496884 - 136 87199472 - Saro_1451 - hypothetical protein 1447 66.82 0 1497036..1498343 + 435 87199473 - Saro_1452 - DNA methylase N-4/N-6 1448 64.78 0 1498340..1498870 + 176 87199474 - Saro_1453 - hypothetical protein 1449 69.71 +1 1498867..1499457 + 196 87199475 - Saro_1454 - hypothetical protein 1450 56.50 -2 1499809..1500054 + 81 87199476 - Saro_1456 - hypothetical protein 1451 64.72 0 1500172..1501404 + 410 87199477 - Saro_1457 - integrase 1452 64.57 0 1501401..1502258 + 285 87199478 - Saro_1458 - IstB-like ATP-binding protein 1453 60.33 -1 1502365..1502853 + 162 87199479 - Saro_1459 - IS6 family transposase 1454 60.68 -1 1502832..1503332 + 166 87199480 - Saro_1460 - transposase 1455 64.69 0 1503407..1503913 - 168 87199481 - Saro_1461 - hypothetical protein 1456 67.63 0 1503934..1504452 - 172 87199482 - Saro_1462 - flavin reductase-like, FMN-binding 1457 66.41 0 1504449..1505219 - 256 87199483 - Saro_1463 - short chain enoyl-CoA hydratase 1458 66.90 0 1505223..1506062 - 279 87199484 - Saro_1464 - enoyl-CoA hydratase/isomerase 1459 58.89 -1 1506059..1506508 - 149 87199485 - Saro_1465 - hypothetical protein 1460 62.27 0 1506540..1506812 + 90 87199486 - Saro_1466 - hypothetical protein 1461 65.44 0 1506861..1507511 + 216 87199487 - Saro_1467 - hypothetical protein 1462 60.76 -1 1507606..1508706 - 366 87199488 - Saro_1468 - luciferase-like 1463 59.83 -1 1508743..1509897 - 384 87199489 - Saro_1469 - luciferase-like 1464 61.08 -1 1510080..1511672 + 530 87199490 - Saro_1470 - AMP-dependent synthetase and ligase 1465 57.88 -2 1511678..1512337 - 219 87199491 - Saro_1471 - TetR family transcriptional regulator 1466 60.89 -1 1512739..1513257 + 172 87199492 - Saro_1472 - hypothetical protein 1467 59.84 -1 1513254..1514396 + 380 87199493 - Saro_1473 - GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase 1468 57.05 -2 1514632..1517085 + 817 87199494 - Saro_1474 - TonB-dependent receptor 1469 54.31 -2 1517212..1518012 + 266 87199495 - Saro_1475 - short-chain dehydrogenase/reductase SDR 1470 62.51 0 1518089..1519171 - 360 87199496 - Saro_1476 - alcohol dehydrogenase, zinc-containing 1471 61.71 -1 1519205..1519567 - 120 87199497 - Saro_1477 - ferredoxin 1472 60.93 -1 1519557..1520810 - 417 87199498 - Saro_1478 - cytochrome P450 1473 61.90 -1 1520981..1521694 + 237 87199499 - Saro_1479 - MerR family transcriptional regulator 1474 64.61 0 1521727..1523376 - 549 87199500 - Saro_1480 - cyclohexanone monooxygenase 1475 59.41 -1 1523603..1524319 + 238 87199501 - Saro_1481 - transposase 1476 56.22 -2 1524528..1525274 - 248 87199502 - Saro_1482 - XRE family transcriptional regulator 1477 58.40 -2 1525404..1526213 + 269 87199503 - Saro_1483 - phytanoyl-CoA dioxygenase 1478 56.18 -2 1526248..1526724 + 158 87199504 - Saro_1484 - hypothetical protein 1479 59.27 -1 1526794..1527510 + 238 87199505 - Saro_1485 - transposase 1480 55.37 -2 1527910..1528980 - 356 87199506 - Saro_1487 - Rieske (2Fe-2S) protein 1481 58.71 -2 1529171..1530226 - 351 87199507 - Saro_1488 - Rieske (2Fe-2S) protein 1482 57.64 -2 1530312..1532891 - 859 87199508 - Saro_1489 - TonB-dependent receptor 1483 62.59 0 1532918..1534144 - 408 87199509 - Saro_1490 - FAD linked oxidase-like 1484 62.42 0 1534155..1534484 - 109 87199510 - Saro_1491 - cytochrome c, class I 1485 60.51 -1 1534481..1536040 - 519 87199511 - Saro_1492 - vanillyl-alcohol oxidase 1486 62.14 0 1536037..1536588 - 183 87199512 - Saro_1493 - twin-arginine translocation pathway signal 1487 58.43 -2 1536757..1538481 - 574 87199513 - Saro_1494 - Fis family transcriptional regulator 1488 59.27 -1 1538674..1539390 + 238 87199514 - Saro_1495 - transposase 1489 64.38 0 1539881..1540711 - 276 87199515 - Saro_1497 - hypothetical protein 1490 61.57 -1 1540830..1542164 + 444 87199516 - Saro_1498 - di- and tricarboxylate transporters-like 1491 60.84 -1 1542170..1543456 - 428 87199517 - Saro_1499 - osmosensitive K+ channel histidine kinase-like 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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