version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1324 64.54 0 1371876..1372580 + 234 87199350 - Saro_1329 - hypothetical protein 1325 66.03 0 1372662..1373597 - 311 87199351 - Saro_1330 - 2OG-Fe(II) oxygenase 1326 63.51 0 1373662..1374105 + 147 87199352 - Saro_1331 - hypothetical protein 1327 66.12 0 1374166..1374348 + 60 87199353 - Saro_1332 - CsbD-like 1328 63.48 0 1374493..1374774 + 93 87199354 - Saro_1333 - hypothetical protein 1329 62.59 0 1374764..1376086 - 440 87199355 - Saro_1334 - major facilitator transporter 1330 62.96 0 1376224..1376817 + 197 87199356 - Saro_1335 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1331 68.23 0 1376843..1377739 - 298 87199357 - Saro_1336 - LysR family transcriptional regulator 1332 63.88 0 1377746..1378963 - 405 87199358 - Saro_1337 - ribonuclease D 1333 65.88 0 1379139..1380920 + 593 87199359 aspS Saro_1338 - aspartyl-tRNA synthetase 1334 57.38 -2 1381048..1381284 + 78 87199360 - Saro_1339 - acyl carrier protein 1335 65.16 0 1381416..1382678 + 420 87199361 - Saro_1340 - 3-oxoacyl-[acyl-carrier-protein] synthase II 1336 66.67 0 1382689..1383666 + 325 87199362 - Saro_1341 - aminodeoxychorismate lyase 1337 67.90 0 1383792..1384439 + 215 87199363 - Saro_1342 - hypothetical protein 1338 66.28 0 1384468..1385775 + 435 87199364 - Saro_1343 - adenosylmethionine--8-amino-7-oxononanoate transaminase 1339 62.31 0 1386230..1388293 + 687 87199365 - Saro_1344 - hypothetical protein 1340 60.94 -1 1388322..1389089 - 255 87199366 - Saro_1345 - abortive infection protein 1341 67.80 0 1389434..1389961 + 175 87199367 - Saro_1346 - (2Fe-2S)-binding protein 1342 67.27 0 1389958..1392267 + 769 87199368 - Saro_1347 - twin-arginine translocation pathway signal 1343 68.58 +1 1392290..1394167 - 625 87199369 - Saro_1348 - ABC transporter related 1344 64.19 0 1394446..1395456 - 336 87199370 - Saro_1349 - hypothetical protein 1345 68.77 +1 1395459..1397264 - 601 87199371 - Saro_1350 - histidine kinase A-like 1346 61.97 -1 1397513..1397980 + 155 87199372 - Saro_1351 - AsnC family transcriptional regulator 1347 64.26 0 1398014..1398304 - 96 87199373 - Saro_1352 - chorismate mutase 1348 65.58 0 1398395..1399408 + 337 87199374 - Saro_1353 - farnesyltranstransferase 1349 63.13 0 1399440..1400456 + 338 87199375 - Saro_1354 - aldo/keto reductase 1350 70.74 +1 1400714..1403167 + 817 87199376 - Saro_1355 - ATP-dependent helicase HrpB 1351 64.52 0 1403216..1403494 + 92 87199377 - Saro_1356 - ETC complex I subunit region 1352 65.68 0 1403928..1405649 + 573 87199378 - Saro_1357 - DNA polymerase III subunits gamma and tau 1353 63.99 0 1405646..1405981 + 111 87199379 - Saro_1358 - hypothetical protein 1354 64.67 0 1406057..1407109 + 350 87199380 - Saro_1359 - VacJ-like lipoprotein 1355 65.02 0 1407116..1408150 - 344 87199381 - Saro_1360 - hypothetical protein 1356 63.93 0 1408377..1410788 + 803 87199382 - Saro_1361 - Lon-A peptidase 1357 63.74 0 1410990..1411262 + 90 87199383 - Saro_1362 - histone-like DNA-binding protein 1358 65.27 0 1411377..1412237 - 286 87199384 - Saro_1363 - hypothetical protein 1359 68.50 0 1412258..1413073 - 271 87199385 - Saro_1364 - RNA methyltransferase TrmH, group 3 1360 65.64 0 1413395..1414267 + 290 87199386 - Saro_1365 - alpha/beta hydrolase 1361 65.22 0 1414307..1415065 + 252 87199387 - Saro_1366 - phosphatidylserine decarboxylase 1362 66.31 0 1415062..1415904 + 280 87199388 - Saro_1367 - CDP-alcohol phosphatidyltransferase 1363 70.25 +1 1415852..1416130 - 92 87199389 - Saro_1368 - hypothetical protein 1364 65.61 0 1416528..1417283 + 251 87199390 rpsB Saro_1369 - 30S ribosomal protein S2 1365 64.62 0 1417409..1418335 + 308 87199391 tsf Saro_1370 - elongation factor Ts 1366 62.99 0 1418481..1419215 + 244 87199392 - Saro_1371 - uridylate kinase 1367 63.08 0 1419217..1419774 + 185 87199393 - Saro_1372 - ribosome recycling factor 1368 64.56 0 1419771..1420481 + 236 87199394 - Saro_1373 - undecaprenyl pyrophosphate synthetase 1369 65.06 0 1420471..1421217 + 248 87199395 - Saro_1374 - phosphatidate cytidylyltransferase 1370 67.53 0 1421222..1422379 + 385 87199396 - Saro_1375 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1371 63.01 0 1422393..1423514 + 373 87199397 - Saro_1376 - peptidase RseP 1372 63.39 0 1423743..1426460 + 905 87199398 - Saro_1377 - surface antigen (D15) 1373 65.94 0 1426460..1427143 + 227 87199399 - Saro_1378 - hypothetical protein 1374 64.15 0 1427166..1427642 + 158 87199400 - Saro_1379 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase 1375 61.78 -1 1427743..1427967 + 74 87199401 rpmE Saro_1380 - 50S ribosomal protein L31 1376 66.67 0 1428104..1428544 + 146 87199402 - Saro_1381 - MarR family transcriptional regulator 1377 62.89 0 1428555..1429190 - 211 87199403 - Saro_1382 - 2OG-Fe(II) oxygenase 1378 68.15 0 1429345..1429749 + 134 87199404 - Saro_1383 - general secretion pathway protein H 1379 70.80 +1 1429739..1430173 + 144 87199405 - Saro_1384 - general secretion pathway protein I 1380 69.51 +1 1430170..1430766 + 198 87199406 - Saro_1385 - general secretion pathway protein J 1381 67.58 0 1430763..1431749 + 328 87199407 - Saro_1386 - general secretion pathway protein K 1382 65.98 0 1432097..1432825 + 242 87199408 - Saro_1387 - heme exporter protein CcmC 1383 65.96 0 1432833..1432973 + 46 87199409 - Saro_1388 - hypothetical protein 1384 64.54 0 1432970..1433440 + 156 87199410 - Saro_1389 - cytochrome c-type biogenesis protein CcmE 1385 66.11 0 1433437..1435404 + 655 87199411 - Saro_1390 - cytochrome c assembly protein 1386 66.67 0 1435401..1435952 + 183 87199412 - Saro_1391 - periplasmic protein thiol 1387 67.35 0 1435949..1436389 + 146 87199413 - Saro_1392 - cytochrome C biogenesis protein 1388 68.81 +1 1436386..1437084 + 232 87199414 - Saro_1393 - tetratricopeptide TPR_4 1389 63.79 0 1437252..1439198 + 648 87199415 - Saro_1394 - K+ potassium transporter 1390 64.92 0 1439353..1440267 + 304 87199416 - Saro_1395 - signal transduction histidine kinase 1391 62.99 0 1440264..1440617 + 117 87199417 - Saro_1396 - response regulator receiver domain-containing protein 1392 64.38 0 1440684..1440989 - 101 87199418 - Saro_1397 - outer membrane protein 1393 62.48 0 1441218..1441790 - 190 87199419 - Saro_1398 - hypothetical protein 1394 61.82 -1 1441908..1442567 - 219 87199420 - Saro_1399 - intracellular septation protein A 1395 67.10 0 1442564..1443490 - 308 87199421 - Saro_1400 - signal recognition particle-docking protein FtsY 1396 65.58 0 1443487..1444683 - 398 87199422 - Saro_1401 - MiaB-like tRNA modifying enzyme 1397 66.55 0 1444680..1445507 - 275 87199423 - Saro_1402 - diaminopimelate epimerase 1398 64.38 0 1445564..1447267 - 567 87199424 - Saro_1403 - diguanylate cyclase/phosphodiesterase 1399 66.06 0 1447540..1449015 + 491 87199425 - Saro_1404 - signal recognition particle subunit FFH/SRP54 (srp54) 1400 67.12 0 1449064..1449501 + 145 87199426 rpsP Saro_1405 - 30S ribosomal protein S16 1401 65.87 0 1449504..1450004 + 166 87199427 - Saro_1406 - 16S rRNA processing protein RimM 1402 65.72 0 1450001..1450741 + 246 87199428 - Saro_1407 - tRNA (Guanine37-N1) methyltransferase 1403 60.98 -1 1450745..1451113 + 122 87199429 rplS Saro_1408 - 50S ribosomal protein L19 1404 64.37 0 1451278..1453542 + 754 87199430 - Saro_1409 - dipeptidyl-peptidase IV 1405 62.67 0 1453782..1454807 + 341 87199431 - Saro_1410 - aspartate-semialdehyde dehydrogenase 1406 65.08 0 1454816..1455571 + 251 87199432 - Saro_1411 - alpha/beta hydrolase 1407 60.59 -1 1455670..1456146 + 158 87199433 - Saro_1412 - hypothetical protein 1408 66.26 0 1456240..1457724 - 494 87199434 - Saro_1413 - AMP nucleosidase 1409 62.83 0 1457796..1458395 - 199 87199435 rplI Saro_1414 - 50S ribosomal protein L9 1410 62.67 0 1458408..1458632 - 74 87199436 rpsR Saro_1415 - 30S ribosomal protein S18 1411 62.53 0 1458636..1458998 - 120 87199437 rpsF Saro_1416 - 30S ribosomal protein S6 1412 68.21 0 1459207..1459983 + 258 87199438 - Saro_1417 - enoyl-CoA hydratase 1413 67.37 0 1460006..1460431 + 141 87199439 - Saro_1418 - putative hydroxylaminobenzene mutase HAB 1414 66.41 0 1460403..1461563 - 386 87199440 - Saro_1419 - acyltransferase 3 1415 64.58 0 1461592..1461879 - 95 87199441 - Saro_1420 - antibiotic biosynthesis monooxygenase 1416 65.70 0 1462057..1464231 + 724 87199442 - Saro_1421 - diguanylate cyclase/phosphodiesterase 1417 66.46 0 1464323..1465267 + 314 87199443 - Saro_1422 - hypothetical protein 1418 63.11 0 1465280..1465645 - 121 87199444 - Saro_1423 - hypothetical protein 1419 64.98 0 1465845..1466378 + 177 87199445 - Saro_1424 - GCN5-related N-acetyltransferase 1420 65.83 0 1466398..1467825 - 475 87199446 - Saro_1425 - UDP-N-acetylmuramate--L-alanine ligase 1421 65.33 0 1467912..1468733 + 273 87199447 - Saro_1426 - peptidase U61, LD-carboxypeptidase A 1422 65.71 0 1468791..1469726 + 311 87199448 - Saro_1427 - [Acyl-carrier-protein] S-malonyltransferase 1423 65.62 0 1469732..1470496 + 254 87199449 - Saro_1428 - 3-oxoacyl-[acyl-carrier-protein] reductase 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.