version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1289 69.37 +1 1339056..1339685 + 209 87199315 - Saro_1294 - hypothetical protein 1290 68.95 +1 1339901..1341172 + 423 87199316 - Saro_1295 - general substrate transporter 1291 71.82 +2 1341179..1341721 - 180 87199317 - Saro_1296 - hypothetical protein 1292 69.50 +1 1341718..1342530 - 270 87199318 - Saro_1297 - pseudouridine synthase, Rsu 1293 66.37 0 1342714..1344042 + 442 87199319 - Saro_1298 - major facilitator transporter 1294 68.96 +1 1344074..1345381 - 435 87199320 - Saro_1299 - FolC bifunctional protein 1295 65.49 0 1345413..1346264 - 283 87199321 - Saro_1300 - acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 1296 69.41 +1 1346261..1347061 - 266 87199322 trpA Saro_1301 - tryptophan synthase subunit alpha 1297 67.82 0 1347061..1348275 - 404 87199323 - Saro_1302 - tryptophan synthase subunit beta 1298 65.41 0 1348647..1349204 + 185 87199324 - Saro_1303 - hypothetical protein 1299 71.74 +2 1349308..1349997 - 229 87199325 - Saro_1304 - phosphoribosylanthranilate isomerase 1300 68.39 0 1350010..1350765 - 251 87199326 - Saro_1305 - hypothetical protein 1301 67.46 0 1350835..1351338 - 167 87199327 - Saro_1306 - GCN5-related N-acetyltransferase 1302 68.74 +1 1351343..1352017 - 224 87199328 - Saro_1307 - orotidine-5'-phosphate decarboxylase 1303 66.67 0 1352014..1352343 - 109 87199329 - Saro_1308 - hypothetical protein 1304 66.59 0 1352436..1353752 - 438 87199330 - Saro_1309 - adenylosuccinate lyase 1305 69.88 +1 1353867..1355732 - 621 87199331 - Saro_1310 - acyltransferase 3 1306 65.99 0 1356054..1356791 - 245 87199332 - Saro_1311 - DNA repair protein RadC 1307 69.17 +1 1356877..1360107 + 1076 87199333 - Saro_1312 - hypothetical protein 1308 61.84 -1 1360155..1360361 + 68 87199334 - Saro_1313 - hypothetical protein 1309 68.63 +1 1360382..1360789 + 135 87199335 - Saro_1314 - hypothetical protein 1310 62.62 0 1360997..1361317 + 106 87199336 - Saro_1315 - putative ATP synthase protein I 1311 60.54 -1 1361358..1362140 + 260 87199337 - Saro_1316 - F0F1 ATP synthase subunit A 1312 66.67 0 1362189..1362416 + 75 87199338 - Saro_1317 - H+-transporting two-sector ATPase, C subunit 1313 67.88 0 1362491..1362985 + 164 87199339 - Saro_1318 - H+-transporting two-sector ATPase, B/B' subunit 1314 66.67 0 1362978..1363532 + 184 87199340 - Saro_1319 - H+-transporting two-sector ATPase, B/B' subunit 1315 67.64 0 1363722..1364750 - 342 87199341 - Saro_1320 - LacI family transcription regulator 1316 68.89 +1 1364792..1365556 - 254 87199342 - Saro_1321 - hydroxyacylglutathione hydrolase 1317 65.43 0 1365649..1367349 - 566 87199343 rpsA Saro_1322 - 30S ribosomal protein S1 1318 48.58 -2 1367634..1368020 - 128 87199344 - Saro_1323 - hypothetical protein 1319 69.22 +1 1368133..1368759 - 208 87199345 - Saro_1324 - cytidylate kinase 1320 62.75 0 1368756..1369010 - 84 87199346 - Saro_1325 - putative permease 1321 70.14 +1 1369010..1370335 - 441 87199347 - Saro_1326 - 3-phosphoshikimate 1-carboxyvinyltransferase 1322 61.01 -1 1370546..1370863 + 105 87199348 - Saro_1327 - hypothetical protein 1323 68.32 0 1371271..1371876 + 201 87199349 - Saro_1328 - hypothetical protein 1324 64.54 0 1371876..1372580 + 234 87199350 - Saro_1329 - hypothetical protein 1325 66.03 0 1372662..1373597 - 311 87199351 - Saro_1330 - 2OG-Fe(II) oxygenase 1326 63.51 0 1373662..1374105 + 147 87199352 - Saro_1331 - hypothetical protein 1327 66.12 0 1374166..1374348 + 60 87199353 - Saro_1332 - CsbD-like 1328 63.48 0 1374493..1374774 + 93 87199354 - Saro_1333 - hypothetical protein 1329 62.59 0 1374764..1376086 - 440 87199355 - Saro_1334 - major facilitator transporter 1330 62.96 0 1376224..1376817 + 197 87199356 - Saro_1335 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1331 68.23 0 1376843..1377739 - 298 87199357 - Saro_1336 - LysR family transcriptional regulator 1332 63.88 0 1377746..1378963 - 405 87199358 - Saro_1337 - ribonuclease D 1333 65.88 0 1379139..1380920 + 593 87199359 aspS Saro_1338 - aspartyl-tRNA synthetase 1334 57.38 -2 1381048..1381284 + 78 87199360 - Saro_1339 - acyl carrier protein 1335 65.16 0 1381416..1382678 + 420 87199361 - Saro_1340 - 3-oxoacyl-[acyl-carrier-protein] synthase II 1336 66.67 0 1382689..1383666 + 325 87199362 - Saro_1341 - aminodeoxychorismate lyase 1337 67.90 0 1383792..1384439 + 215 87199363 - Saro_1342 - hypothetical protein 1338 66.28 0 1384468..1385775 + 435 87199364 - Saro_1343 - adenosylmethionine--8-amino-7-oxononanoate transaminase 1339 62.31 0 1386230..1388293 + 687 87199365 - Saro_1344 - hypothetical protein 1340 60.94 -1 1388322..1389089 - 255 87199366 - Saro_1345 - abortive infection protein 1341 67.80 0 1389434..1389961 + 175 87199367 - Saro_1346 - (2Fe-2S)-binding protein 1342 67.27 0 1389958..1392267 + 769 87199368 - Saro_1347 - twin-arginine translocation pathway signal 1343 68.58 +1 1392290..1394167 - 625 87199369 - Saro_1348 - ABC transporter related 1344 64.19 0 1394446..1395456 - 336 87199370 - Saro_1349 - hypothetical protein 1345 68.77 +1 1395459..1397264 - 601 87199371 - Saro_1350 - histidine kinase A-like 1346 61.97 -1 1397513..1397980 + 155 87199372 - Saro_1351 - AsnC family transcriptional regulator 1347 64.26 0 1398014..1398304 - 96 87199373 - Saro_1352 - chorismate mutase 1348 65.58 0 1398395..1399408 + 337 87199374 - Saro_1353 - farnesyltranstransferase 1349 63.13 0 1399440..1400456 + 338 87199375 - Saro_1354 - aldo/keto reductase 1350 70.74 +1 1400714..1403167 + 817 87199376 - Saro_1355 - ATP-dependent helicase HrpB 1351 64.52 0 1403216..1403494 + 92 87199377 - Saro_1356 - ETC complex I subunit region 1352 65.68 0 1403928..1405649 + 573 87199378 - Saro_1357 - DNA polymerase III subunits gamma and tau 1353 63.99 0 1405646..1405981 + 111 87199379 - Saro_1358 - hypothetical protein 1354 64.67 0 1406057..1407109 + 350 87199380 - Saro_1359 - VacJ-like lipoprotein 1355 65.02 0 1407116..1408150 - 344 87199381 - Saro_1360 - hypothetical protein 1356 63.93 0 1408377..1410788 + 803 87199382 - Saro_1361 - Lon-A peptidase 1357 63.74 0 1410990..1411262 + 90 87199383 - Saro_1362 - histone-like DNA-binding protein 1358 65.27 0 1411377..1412237 - 286 87199384 - Saro_1363 - hypothetical protein 1359 68.50 0 1412258..1413073 - 271 87199385 - Saro_1364 - RNA methyltransferase TrmH, group 3 1360 65.64 0 1413395..1414267 + 290 87199386 - Saro_1365 - alpha/beta hydrolase 1361 65.22 0 1414307..1415065 + 252 87199387 - Saro_1366 - phosphatidylserine decarboxylase 1362 66.31 0 1415062..1415904 + 280 87199388 - Saro_1367 - CDP-alcohol phosphatidyltransferase 1363 70.25 +1 1415852..1416130 - 92 87199389 - Saro_1368 - hypothetical protein 1364 65.61 0 1416528..1417283 + 251 87199390 rpsB Saro_1369 - 30S ribosomal protein S2 1365 64.62 0 1417409..1418335 + 308 87199391 tsf Saro_1370 - elongation factor Ts 1366 62.99 0 1418481..1419215 + 244 87199392 - Saro_1371 - uridylate kinase 1367 63.08 0 1419217..1419774 + 185 87199393 - Saro_1372 - ribosome recycling factor 1368 64.56 0 1419771..1420481 + 236 87199394 - Saro_1373 - undecaprenyl pyrophosphate synthetase 1369 65.06 0 1420471..1421217 + 248 87199395 - Saro_1374 - phosphatidate cytidylyltransferase 1370 67.53 0 1421222..1422379 + 385 87199396 - Saro_1375 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1371 63.01 0 1422393..1423514 + 373 87199397 - Saro_1376 - peptidase RseP 1372 63.39 0 1423743..1426460 + 905 87199398 - Saro_1377 - surface antigen (D15) 1373 65.94 0 1426460..1427143 + 227 87199399 - Saro_1378 - hypothetical protein 1374 64.15 0 1427166..1427642 + 158 87199400 - Saro_1379 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase 1375 61.78 -1 1427743..1427967 + 74 87199401 rpmE Saro_1380 - 50S ribosomal protein L31 1376 66.67 0 1428104..1428544 + 146 87199402 - Saro_1381 - MarR family transcriptional regulator 1377 62.89 0 1428555..1429190 - 211 87199403 - Saro_1382 - 2OG-Fe(II) oxygenase 1378 68.15 0 1429345..1429749 + 134 87199404 - Saro_1383 - general secretion pathway protein H 1379 70.80 +1 1429739..1430173 + 144 87199405 - Saro_1384 - general secretion pathway protein I 1380 69.51 +1 1430170..1430766 + 198 87199406 - Saro_1385 - general secretion pathway protein J 1381 67.58 0 1430763..1431749 + 328 87199407 - Saro_1386 - general secretion pathway protein K 1382 65.98 0 1432097..1432825 + 242 87199408 - Saro_1387 - heme exporter protein CcmC 1383 65.96 0 1432833..1432973 + 46 87199409 - Saro_1388 - hypothetical protein 1384 64.54 0 1432970..1433440 + 156 87199410 - Saro_1389 - cytochrome c-type biogenesis protein CcmE 1385 66.11 0 1433437..1435404 + 655 87199411 - Saro_1390 - cytochrome c assembly protein 1386 66.67 0 1435401..1435952 + 183 87199412 - Saro_1391 - periplasmic protein thiol 1387 67.35 0 1435949..1436389 + 146 87199413 - Saro_1392 - cytochrome C biogenesis protein 1388 68.81 +1 1436386..1437084 + 232 87199414 - Saro_1393 - tetratricopeptide TPR_4 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.