version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1124 67.91 0 1172420..1173868 + 482 87199150 murE Saro_1128 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 1125 67.82 0 1173865..1175334 + 489 87199151 - Saro_1129 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 1126 65.54 0 1175335..1176399 + 354 87199152 - Saro_1130 - phospho-N-acetylmuramoyl-pentapeptide-transferase 1127 67.27 0 1176396..1177727 + 443 87199153 - Saro_1131 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 1128 63.90 0 1177766..1178959 + 397 87199154 - Saro_1132 - cell cycle protein 1129 68.12 0 1178956..1180122 + 388 87199155 murG Saro_1133 - N-acetylglucosaminyl transferase 1130 65.33 0 1180119..1181543 + 474 87199156 murC Saro_1134 - UDP-N-acetylmuramate--L-alanine ligase 1131 65.66 0 1181540..1182433 + 297 87199157 - Saro_1135 - UDP-N-acetylmuramate dehydrogenase 1132 64.97 0 1182477..1183418 + 313 87199158 - Saro_1136 - D-alanine--D-alanine ligase 1133 67.50 0 1183423..1184385 + 320 87199159 - Saro_1137 - cell division protein FtsQ 1134 65.96 0 1184393..1185673 + 426 87199160 - Saro_1138 - cell division protein FtsA 1135 67.07 0 1185868..1187343 + 491 87199161 - Saro_1139 - cell division protein FtsZ 1136 69.45 +1 1187406..1189598 + 730 87199162 - Saro_1140 - hypothetical protein 1137 65.67 0 1189801..1190304 + 167 87199163 - Saro_1141 - hypothetical protein 1138 69.75 +1 1190387..1191196 + 269 87199164 - Saro_1142 - pyrroline-5-carboxylate reductase 1139 63.31 0 1191311..1192054 + 247 87199165 - Saro_1143 - hypothetical protein 1140 66.12 0 1192227..1192958 + 243 87199166 - Saro_1144 - hypothetical protein 1141 65.25 0 1193278..1194336 + 352 161760696 obgE Saro_1145 - GTPase ObgE 1142 69.40 +1 1194468..1195601 + 377 87199168 - Saro_1146 - gamma-glutamyl kinase 1143 68.95 +1 1195601..1196521 + 306 87199169 - Saro_1147 - NAD-dependent epimerase/dehydratase 1144 60.51 -1 1196568..1197038 + 156 87199170 - Saro_1148 - hypothetical protein 1145 63.31 0 1197056..1197472 + 138 87199171 - Saro_1149 - hypothetical protein 1146 70.68 +1 1197469..1200012 - 847 87199172 - Saro_1150 - hypothetical protein 1147 69.99 +1 1200009..1200701 - 230 87199173 - Saro_1151 - ABC transporter related 1148 67.11 0 1200770..1201453 + 227 87199174 - Saro_1152 - lipolytic enzyme, G-D-S-L 1149 70.39 +1 1201482..1202555 - 357 87199175 recF Saro_1153 - recombination protein F 1150 68.55 +1 1202640..1203701 - 353 87199176 - Saro_1154 - Fis family transcriptional regulator 1151 67.30 0 1203837..1203995 + 52 87199177 - Saro_1155 - hypothetical protein 1152 65.21 0 1203995..1204819 + 274 87199178 - Saro_1156 - phage shock protein A, PspA 1153 61.28 -1 1204823..1205119 + 98 87199179 - Saro_1157 - hypothetical protein 1154 65.07 0 1205116..1205490 + 124 87199180 - Saro_1158 - phage shock protein C, PspC 1155 64.18 0 1205522..1205803 + 93 87199181 - Saro_1159 - hypothetical protein 1156 68.59 +1 1205800..1206111 + 103 87199182 - Saro_1160 - hypothetical protein 1157 63.00 0 1206108..1206380 + 90 87199183 - Saro_1161 - hypothetical protein 1158 65.88 0 1206395..1206649 + 84 87199184 - Saro_1162 - hypothetical protein 1159 69.01 +1 1206672..1206884 + 70 87199185 - Saro_1163 - hypothetical protein 1160 67.15 0 1206957..1207370 + 137 87199186 - Saro_1164 - Fe-S metabolism associated SufE 1161 69.52 +1 1207388..1207738 + 116 87199187 - Saro_1165 - hypothetical protein 1162 68.90 +1 1207735..1208808 + 357 87199188 - Saro_1166 - acyltransferase 3 1163 67.36 0 1208875..1209450 + 191 87199189 - Saro_1167 - hypothetical protein 1164 65.16 0 1209469..1209999 - 176 87199190 - Saro_1168 - carotene hydroxylase 1165 69.03 +1 1210124..1210504 + 126 87199191 - Saro_1169 - hypothetical protein 1166 68.34 0 1210614..1212050 + 478 87199192 - Saro_1170 - isopropylmalate isomerase large subunit 1167 69.11 +1 1212058..1212588 + 176 87199193 - Saro_1171 - hypothetical protein 1168 67.26 0 1212585..1213091 + 168 87199194 - Saro_1172 - uracil-DNA glycosylase superfamily protein 1169 64.86 0 1213375..1213983 + 202 87199195 - Saro_1173 - 3-isopropylmalate dehydratase, small subunit 1170 68.56 +1 1214075..1215076 + 333 87199196 - Saro_1174 - alcohol dehydrogenase 1171 70.27 +1 1215126..1215764 - 212 87199197 - Saro_1175 - hypothetical protein 1172 70.77 +1 1215757..1216803 - 348 87199198 - Saro_1176 - 2-nitropropane dioxygenase, NPD 1173 61.11 -1 1216809..1217006 - 65 87199199 - Saro_1177 - hypothetical protein 1174 64.60 0 1217118..1218518 - 466 87199200 - Saro_1178 - dihydrolipoamide dehydrogenase 1175 66.99 0 1218600..1219826 - 408 87199201 - Saro_1179 - 2-oxoglutarate dehydrogenase E2 component 1176 66.49 0 1219865..1222717 - 950 87199202 kgd Saro_1180 - alpha-ketoglutarate decarboxylase 1177 64.53 0 1222937..1223827 - 296 87199203 - Saro_1181 - succinyl-CoA synthetase (ADP-forming) alpha subunit 1178 65.42 0 1223941..1224903 - 320 87199204 - Saro_1182 - malate dehydrogenase (NAD) 1179 68.59 +1 1225225..1225536 - 103 87199205 - Saro_1183 - hypothetical protein 1180 65.07 0 1225715..1226656 - 313 87199206 - Saro_1184 - endo alpha-1,4 polygalactosaminidase, putative 1181 72.20 +2 1226780..1228009 - 409 87199207 - Saro_1185 - cell wall hydrolase, SleB 1182 69.03 +1 1228490..1230394 + 634 87199208 - Saro_1186 - TonB-dependent receptor 1183 71.07 +1 1230445..1231398 + 317 87199209 - Saro_1187 - periplasmic binding protein 1184 70.82 +1 1231395..1232357 + 320 87199210 - Saro_1188 - transport system permease protein 1185 71.58 +1 1232357..1233088 + 243 87199211 - Saro_1189 - ABC transporter related 1186 68.73 +1 1233486..1234793 + 435 87199212 - Saro_1190 - hypothetical protein 1187 66.67 0 1234807..1235709 + 300 87199213 - Saro_1191 - hypothetical protein 1188 66.39 0 1235856..1238768 + 970 87199214 uvrA Saro_1192 - excinuclease ABC subunit A 1189 69.82 +1 1238854..1239360 - 168 87199215 - Saro_1193 - hypothetical protein 1190 70.93 +1 1239972..1241567 + 531 87199216 - Saro_1194 - hypothetical protein 1191 65.93 0 1242494..1243708 - 404 87199217 - Saro_1195 - argininosuccinate synthase 1192 66.83 0 1243919..1245124 + 401 87199218 - Saro_1196 - Rieske (2Fe-2S) protein 1193 64.59 0 1245211..1246557 - 448 87199219 - Saro_1197 - aldehyde dehydrogenase 1194 68.30 0 1246715..1247386 - 223 87199220 - Saro_1198 - phosphoglycolate phosphatase 1195 67.98 0 1247448..1248821 + 457 87199221 - Saro_1199 - UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase 1196 64.26 0 1248898..1249146 + 82 87199222 - Saro_1200 - CopG-like DNA-binding protein 1197 61.20 -1 1249150..1249515 + 121 87199223 - Saro_1201 - PilT protein-like 1198 68.15 0 1249534..1251357 + 607 87199224 - Saro_1202 - D-fructose-6-phosphate amidotransferase 1199 67.76 0 1251369..1251824 + 151 87199225 - Saro_1203 - tRNA/rRNA methyltransferase 1200 69.84 +1 1252074..1252862 - 262 87199226 - Saro_1204 - hypothetical protein 1201 65.04 0 1252859..1253782 - 307 87199227 - Saro_1205 - beta-lactamase-like 1202 60.63 -1 1253875..1254222 + 115 87199228 - Saro_1206 - ArsR family transcriptional regulator 1203 67.13 0 1254345..1254989 + 214 87199229 - Saro_1207 - twin-arginine translocation pathway signal 1204 65.77 0 1255008..1256687 + 559 87199230 - Saro_1208 - glucose-methanol-choline oxidoreductase 1205 69.06 +1 1256692..1258152 + 486 87199231 - Saro_1209 - major facilitator transporter 1206 63.95 0 1258216..1258803 + 195 87199232 - Saro_1210 - metal-dependent phosphohydrolase 1207 65.40 0 1258874..1260457 + 527 87199233 - Saro_1211 - acyl-CoA synthetase 1208 66.16 0 1260614..1261603 - 329 87199234 - Saro_1212 - hypothetical protein 1209 67.77 0 1261600..1264326 - 908 87199235 - Saro_1213 - hypothetical protein 1210 68.02 0 1264328..1265212 - 294 87199236 - Saro_1214 - hypothetical protein 1211 67.53 0 1265224..1265685 - 153 87199237 - Saro_1215 - hypothetical protein 1212 67.05 0 1265710..1266237 - 175 87199238 - Saro_1216 - hypothetical protein 1213 64.86 0 1266836..1267111 - 91 87199239 - Saro_1217 - histone-like DNA-binding protein 1214 67.74 0 1267442..1268650 + 402 87199240 - Saro_1218 - secretion protein HlyD 1215 64.18 0 1268657..1271791 + 1044 87199241 - Saro_1219 - hydrophobe/amphiphile efflux-1 HAE1 1216 67.95 0 1271788..1273191 + 467 87199242 - Saro_1220 - RND efflux system, outer membrane lipoprotein, NodT 1217 64.96 0 1273185..1274354 - 389 87199243 - Saro_1221 - acyl-CoA dehydrogenase-like 1218 67.57 0 1274354..1275568 - 404 87199244 - Saro_1222 - acetyl-CoA acetyltransferase 1219 66.02 0 1275620..1276849 - 409 87199245 - Saro_1223 - L-carnitine dehydratase/bile acid-inducible protein F 1220 63.88 0 1276877..1278061 - 394 87199246 - Saro_1224 - acyl-CoA dehydrogenase-like 1221 65.14 0 1278073..1278990 - 305 87199247 - Saro_1225 - short-chain dehydrogenase/reductase SDR 1222 69.07 +1 1279093..1279842 + 249 87199248 - Saro_1226 - IclR family transcriptional regulator 1223 66.12 0 1279961..1280869 + 302 87199249 - Saro_1227 - LysR family transcriptional regulator 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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