version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1002 64.48 0 1048789..1049382 + 197 87199028 - Saro_1006 - imidazoleglycerol-phosphate dehydratase 1003 67.62 0 1049375..1050004 + 209 87199029 hisH Saro_1007 - imidazole glycerol phosphate synthase subunit HisH 1004 64.39 0 1050070..1051209 + 379 87199030 - Saro_1008 - hypothetical protein 1005 65.01 0 1051232..1051957 + 241 87199031 - Saro_1009 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1006 68.09 0 1051962..1052735 + 257 87199032 - Saro_1010 - imidazole glycerol phosphate synthase subunit HisF 1007 66.36 0 1053185..1053508 + 107 87199033 - Saro_1011 - phosphoribosyl-ATP pyrophosphatase 1008 64.02 0 1053510..1053887 + 125 87199034 - Saro_1012 - histidine triad (HIT) protein 1009 66.45 0 1053963..1054427 + 154 87199035 - Saro_1013 - 4-hydroxybenzoyl-CoA thioesterase 1010 66.10 0 1054424..1055125 + 233 87199036 - Saro_1014 - MotA/TolQ/ExbB proton channel 1011 68.43 0 1055129..1055581 + 150 87199037 - Saro_1015 - biopolymer transport protein ExbD/TolR 1012 70.41 +1 1055592..1056473 + 293 87199038 - Saro_1016 - hypothetical protein 1013 65.95 0 1056470..1057855 + 461 87199039 tolB Saro_1017 - translocation protein TolB 1014 67.64 0 1057969..1058481 + 170 87199040 - Saro_1018 - OmpA/MotB 1015 66.67 0 1058602..1059135 + 177 87199041 - Saro_1019 - heat shock protein DnaJ-like 1016 62.63 0 1059132..1060022 + 296 87199042 - Saro_1020 - phytanoyl-CoA dioxygenase 1017 68.00 0 1059940..1061142 - 400 87199043 - Saro_1021 - polynucleotide adenylyltransferase region 1018 66.67 0 1061135..1061749 - 204 87199044 - Saro_1022 - NUDIX hydrolase 1019 67.54 0 1061746..1062315 - 189 87199045 - Saro_1023 - hypothetical protein 1020 66.48 0 1062338..1062874 - 178 87199046 - Saro_1024 - acetyltransferase-like 1021 65.40 0 1063077..1064498 + 473 87199047 - Saro_1025 - cytochrome bd ubiquinol oxidase, subunit I 1022 66.67 0 1064498..1065496 + 332 87199048 - Saro_1026 - cytochrome d ubiquinol oxidase, subunit II 1023 66.05 0 1065483..1065644 + 53 87199049 - Saro_1027 - hypothetical protein 1024 67.53 0 1065625..1067019 - 464 87199050 - Saro_1028 - XRE family transcriptional regulator 1025 63.35 0 1067166..1068761 + 531 87199051 - Saro_1029 - isocitrate lyase 1026 60.38 -1 1068826..1068984 + 52 87199052 - Saro_1030 - hypothetical protein 1027 65.67 0 1069183..1071492 + 769 87199053 - Saro_1031 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1028 67.99 0 1071489..1072166 - 225 87199054 - Saro_1032 - phosphoribosylformylglycinamidine synthase I 1029 62.82 0 1072181..1072414 - 77 87199055 - Saro_1033 - phosphoribosylformylglycinamidine synthetase PurS 1030 65.85 0 1072837..1073451 + 204 87199056 - Saro_1034 - TetR family transcriptional regulator 1031 70.46 +1 1073448..1074422 + 324 87199057 - Saro_1035 - secretion protein HlyD 1032 69.20 +1 1074419..1075405 + 328 87199058 - Saro_1036 - ABC transporter related 1033 65.97 0 1075402..1076550 + 382 87199059 - Saro_1037 - hypothetical protein 1034 68.67 +1 1076575..1079421 - 948 87199060 - Saro_1038 - peptidase M16-like 1035 60.00 -1 1079480..1079674 - 64 87199061 - Saro_1039 - hypothetical protein 1036 54.79 -2 1079674..1079976 - 100 87199062 - Saro_1040 - hypothetical protein 1037 62.85 0 1080291..1081076 - 261 87199063 - Saro_1041 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1038 65.73 0 1081361..1081786 + 141 87199064 - Saro_1042 - hypothetical protein 1039 68.03 0 1081783..1082370 + 195 87199065 - Saro_1043 - hypothetical protein 1040 66.67 0 1082367..1083260 + 297 87199066 - Saro_1044 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1041 66.67 0 1083306..1085522 + 738 87199067 - Saro_1045 - branched-chain alpha-keto acid dehydrogenase E1 component 1042 68.34 0 1085515..1086528 + 337 87199068 - Saro_1046 - acyl-carrier domain-containing protein 1043 70.32 +1 1086525..1086989 + 154 87199069 - Saro_1047 - protein tyrosine phosphatase 1044 67.96 0 1087170..1087943 - 257 87199070 - Saro_1048 - DeoR family transcriptional regulator 1045 66.57 0 1088007..1089080 - 357 87199071 - Saro_1049 - rhamnose-proton symporter 1046 66.06 0 1089104..1090249 - 381 87199072 lldD Saro_1050 - L-lactate dehydrogenase 1047 67.72 0 1090260..1091687 - 475 87199073 - Saro_1051 - carbohydrate kinase, FGGY 1048 68.81 +1 1091834..1092811 - 325 87199074 - Saro_1052 - regulatory protein, LuxR 1049 63.05 0 1093126..1095501 + 791 87199075 - Saro_1053 - TonB-dependent receptor 1050 64.76 0 1095516..1097246 + 576 87199076 - Saro_1054 - amidohydrolase-like 1051 70.11 +1 1097674..1097847 - 57 87199077 - Saro_1055 - hypothetical protein 1052 70.97 +1 1097844..1098842 - 332 87199078 - Saro_1056 - ribonuclease 1053 70.30 +1 1098832..1099437 - 201 87199079 - Saro_1057 - maf protein 1054 62.96 0 1099437..1099733 - 98 87199080 - Saro_1058 - translation initiation factor 1 1055 67.71 0 1100033..1102534 + 833 87199081 - Saro_1059 - TonB-dependent receptor 1056 66.16 0 1102691..1104667 + 658 87199082 uvrC Saro_1060 - excinuclease ABC subunit C 1057 65.63 0 1104677..1105735 + 352 87199083 - Saro_1061 - pyridoxal-5'-phosphate-dependent enzyme, beta subunit 1058 68.69 +1 1105871..1106659 + 262 87199084 - Saro_1062 - hypothetical protein 1059 68.87 +1 1106656..1107108 + 150 87199085 - Saro_1063 - hypothetical protein 1060 67.11 0 1107109..1108011 - 300 87199086 - Saro_1064 - palmitoyl-CoA hydrolase 1061 64.40 0 1108056..1108937 - 293 87199087 - Saro_1065 - transcription factor jumonji, jmjC 1062 65.03 0 1108934..1110097 - 387 87199088 - Saro_1066 - hypothetical protein 1063 64.02 0 1110255..1112408 - 717 87199089 hppA Saro_1067 - membrane-bound proton-translocating pyrophosphatase 1064 68.52 +1 1112500..1113414 - 304 87199090 - Saro_1068 - thiamine-monophosphate kinase 1065 64.96 0 1113487..1114659 + 390 87199091 - Saro_1069 - acetyl-CoA acetyltransferase 1066 66.41 0 1114693..1115478 + 261 87199092 - Saro_1070 - short-chain dehydrogenase/reductase SDR 1067 64.72 0 1115540..1116412 + 290 87199093 - Saro_1071 - enoyl-CoA hydratase 1068 61.03 -1 1116409..1117047 + 212 87199094 - Saro_1072 - TetR family transcriptional regulator 1069 63.40 0 1117252..1117710 + 152 87199095 - Saro_1073 - MarR family transcriptional regulator 1070 66.07 0 1117707..1118714 + 335 87199096 - Saro_1074 - fumarylacetoacetate (FAA) hydrolase 1071 64.38 0 1118771..1119778 - 335 87199097 - Saro_1075 - type II secretion system protein 1072 63.49 0 1119798..1120772 - 324 87199098 - Saro_1076 - type II secretion system protein 1073 65.65 0 1120816..1122090 - 424 87199099 - Saro_1077 - response regulator receiver domain-containing protein 1074 67.41 0 1122095..1122766 - 223 87199100 - Saro_1078 - hypothetical protein 1075 65.99 0 1122781..1124400 - 539 87199101 - Saro_1079 - type II and III secretion system protein 1076 66.96 0 1124402..1125430 - 342 87199102 - Saro_1080 - Flp pilus assembly CpaB 1077 64.67 0 1125506..1126006 - 166 87199103 - Saro_1081 - peptidase A24A, prepilin type IV 1078 66.77 0 1126076..1127068 + 330 87199104 - Saro_1082 - lysophospholipase L2 1079 69.55 +1 1127065..1128174 + 369 87199105 - Saro_1083 - FAD dependent oxidoreductase 1080 56.83 -2 1128266..1128448 + 60 87199106 - Saro_1084 - hypothetical protein 1081 66.20 0 1128544..1128975 - 143 87199107 - Saro_1085 - RNase HI 1082 68.39 0 1128972..1129958 - 328 87199108 - Saro_1086 - homoserine kinase 1083 68.42 0 1129961..1130929 - 322 87199109 - Saro_1087 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1084 69.68 +1 1131056..1131718 + 220 87199110 - Saro_1088 - hypothetical protein 1085 64.78 0 1131811..1133559 + 582 87199111 - Saro_1089 - arginyl-tRNA synthetase 1086 68.13 0 1133585..1134334 + 249 87199112 - Saro_1090 - hypothetical protein 1087 67.70 0 1134430..1135497 + 355 87199113 - Saro_1091 - Beta-N-acetylhexosaminidase 1088 66.42 0 1135497..1136294 + 265 87199114 - Saro_1092 - condensin subunit ScpA 1089 66.51 0 1136291..1136938 + 215 87199115 - Saro_1093 - condensin subunit ScpB 1090 65.08 0 1137023..1137274 + 83 87199116 - Saro_1094 - twin arginine-targeting protein translocase 1091 68.53 +1 1137301..1137729 + 142 87199117 - Saro_1095 - twin-arginine translocation protein TatB 1092 62.14 0 1137726..1138565 + 279 87199118 - Saro_1096 - Sec-independent protein translocase TatC 1093 69.01 +1 1138736..1140442 - 568 87199119 - Saro_1097 - amidohydrolase 1094 69.01 +1 1140439..1141377 - 312 87199120 - Saro_1098 - 3-hydroxyisobutyrate dehydrogenase 1095 65.69 0 1141436..1141846 + 136 87199121 - Saro_1099 - hypothetical protein 1096 67.93 0 1141884..1143149 + 421 87199122 - Saro_1100 - threonine dehydratase 1097 63.63 0 1143360..1144214 + 284 87199123 - Saro_1101 - arginyl-tRNA-protein transferase 1098 67.70 0 1144285..1146414 + 709 87199124 - Saro_1102 - surface antigen (D15) 1099 67.64 0 1146414..1150610 + 1398 87199125 - Saro_1103 - hypothetical protein 1100 66.39 0 1150672..1152096 - 474 87199126 - Saro_1104 - aldehyde dehydrogenase 1101 60.48 -1 1152213..1152503 - 96 87199127 - Saro_1105 - hypothetical protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.