version 1.0
Nitratiruptor sp. SB155-2, complete genome - 1..1877931 1843 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 910 35.40 -1 926615..927196 + 193 152990663 - NIS_0917 - protein-glutamate methylesterase 911 30.86 -2 927190..928038 + 282 152990664 - NIS_0918 - chemotaxis protein methyltransferase 912 40.45 0 928069..929346 - 425 152990665 - NIS_0919 - hypothetical protein 913 40.12 0 929397..930089 - 230 152990666 gpmA NIS_0920 - phosphoglycerate mutase 914 43.00 0 930090..931103 - 337 152990667 - NIS_0921 - glyceraldehyde 3-phosphate dehydrogenase 915 40.96 0 931155..932543 - 462 152990668 - NIS_0922 - RNA-metabolising metallo-beta-lactamase 916 43.62 +1 932533..934932 - 799 152990669 ppsA NIS_0923 - phosphoenolpyruvate synthase 917 41.65 0 934942..936852 - 636 152990670 - NIS_0924 - hypothetical protein 918 41.70 0 936865..937689 - 274 152990671 lipA NIS_0925 - lipoyl synthase 919 40.39 0 937673..938239 - 188 152990672 lipB NIS_0926 - lipoate-protein ligase B 920 43.23 0 938239..939147 - 302 152990673 - NIS_0927 - aldolase 921 39.63 0 939144..940064 - 306 152990674 - NIS_0928 - decarboxylase family protein 922 37.36 0 940067..941308 - 413 152990675 - NIS_0929 - hypothetical protein 923 42.37 0 941305..943992 - 895 152990676 - NIS_0930 - H+-transporting P-type ATPase 924 44.32 +1 943992..945311 - 439 152990677 - NIS_0931 - pyruvate/2-oxoglutarate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase 925 41.40 0 945308..946534 - 408 152990678 - NIS_0932 - pyruvate/2-oxoglutarate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase 926 44.89 +1 946524..947501 - 325 152990679 - NIS_0933 - pyruvate/2-oxoglutarate dehydrogenase complex, E1 component, beta subunit 927 44.86 +1 947488..948459 - 323 152990680 - NIS_0934 - pyruvate/2-oxoglutarate dehydrogenase complex, E1 component, alpha subunit 928 46.49 +1 948452..948793 - 113 152990681 - NIS_0935 - hypothetical protein 929 42.23 0 948837..950735 - 632 152990682 glgB NIS_0936 - 1,4-alpha-glucan branching enzyme 930 43.02 0 950732..952186 - 484 152990683 - NIS_0937 - glycogen synthase 931 40.37 0 952263..952958 - 231 152990684 - NIS_0938 - hypothetical protein 932 39.58 0 952942..953949 - 335 152990685 galT NIS_0939 - galactose-1-phosphate uridylyltransferase 933 38.82 0 953937..955886 - 649 152990686 - NIS_0940 - 4-alpha-glucanotransferase 934 39.12 0 955896..957797 - 633 152990687 - NIS_0941 - glycoside hydrolase 935 43.18 0 960316..960579 - 87 152990688 - NIS_0943 - hypothetical protein 936 42.30 0 960583..962232 - 549 152990689 - NIS_0944 - glycogen/starch/alpha-glucan phosphorylase 937 40.98 0 962229..963470 - 413 152990690 - NIS_0945 - glucose-6-phosphate isomerase 938 43.77 +1 963467..965056 - 529 152990691 pgm NIS_0946 - phosphoglucomutase 939 40.72 0 965053..967149 - 698 152990692 - NIS_0947 - glycogen/starch/alpha-glucan phosphorylase 940 44.12 +1 967278..968798 + 506 152990693 purH NIS_0948 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 941 39.75 0 968798..969529 + 243 152990694 - NIS_0949 - hypothetical protein 942 35.54 -1 969462..970775 - 437 152990695 - NIS_0950 - hypothetical protein 943 39.06 0 970769..972793 - 674 152990696 - NIS_0951 - TonB-dependent receptor 944 39.14 0 972894..974459 + 521 152990697 - NIS_0952 - ferredoxin--nitrite reductase 945 38.24 0 974435..975799 - 454 152990698 - NIS_0953 - hypothetical protein 946 37.25 0 975934..977745 + 603 152990699 htpG NIS_0954 - heat shock protein 90 947 41.89 0 977845..978744 + 299 152990700 cbpA NIS_0955 - co-chaperone-curved DNA binding protein A 948 38.32 0 978737..979117 + 126 152990701 - NIS_0956 - MerR family transcriptional regulator 949 43.31 0 979125..980387 - 420 152990702 murA NIS_0957 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 950 36.57 0 980458..980859 + 133 152990703 - NIS_0958 - hypothetical protein 951 31.74 -1 980856..981356 + 166 152990704 - NIS_0959 - tellurite resistance protein TehB 952 36.35 0 981365..981961 + 198 152990705 - NIS_0960 - TetR family transcriptional regulator 953 39.95 0 981951..982811 + 286 152990706 - NIS_0961 - Ni-Fe hydrogenase, small subunit HupS 954 37.71 0 982801..984012 + 403 152990707 - NIS_0962 - Ni-Fe hydrogenase, large subunit HupV 955 45.23 +1 984122..985348 + 408 152990708 - NIS_0963 - Ni-Fe hydrogenase, small subunit 956 42.49 0 985348..987072 + 574 152990709 - NIS_0964 - Ni-Fe hydrogenase, large subunit 957 38.60 0 987083..987784 + 233 152990710 - NIS_0965 - Ni-Fe hydrogenase, cytochrome b subunit 958 40.04 0 987786..988337 + 183 152990711 - NIS_0966 - hydrogenase expression/formation protease 959 36.29 0 988321..989334 + 337 152990712 - NIS_0967 - hypothetical protein 960 38.21 0 989343..990080 + 245 152990713 - NIS_0968 - hypothetical protein 961 37.69 0 990077..992188 + 703 152990714 - NIS_0969 - hydrogenase maturation protein HypF 962 36.35 0 992193..992888 - 231 152990715 - NIS_0970 - hypothetical protein 963 38.22 0 992885..994072 - 395 152990716 - NIS_0971 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 964 32.08 -1 994069..994704 - 211 152990717 - NIS_0972 - transposase 965 38.16 0 994803..995444 + 213 152990718 - NIS_0973 - hypothetical protein 966 38.11 0 995454..996185 + 243 152990719 - NIS_0974 - hydrogenase accessory protein HypB 967 39.46 0 996185..996478 + 97 152990720 - NIS_0975 - hydrogenase expression/formation protein HupF/HypC 968 41.38 0 996468..997610 + 380 152990721 - NIS_0976 - hydrogenase expression/formation protein HypD 969 42.20 0 997607..998599 + 330 152990722 - NIS_0977 - hydrogenase expression/formation protein HypE 970 37.68 0 998593..1000272 + 559 152990723 - NIS_0978 - hydrogenase maturation protein HoxX 971 36.78 0 1000265..1000612 + 115 152990724 - NIS_0979 - hydrogenase expression/synthesis protein HypA 972 35.26 -1 1000620..1001243 - 207 152990725 - NIS_0980 - TetR family transcriptional regulator 973 35.03 -1 1001451..1002512 + 353 152990726 - NIS_0981 - phage integrase family site specific recombinase 974 36.67 0 1002512..1002811 + 99 152990727 - NIS_0982 - chorismate mutase 975 36.73 0 1002817..1003494 - 225 152990728 - NIS_0983 - hypothetical protein 976 39.72 0 1003504..1004208 - 234 152990729 - NIS_0984 - flagellar motor protein MotB 977 39.00 0 1004212..1004970 - 252 152990730 - NIS_0985 - flagellar motor protein MotA 978 36.08 0 1005023..1005277 - 84 152990731 - NIS_0986 - hypothetical protein 979 35.94 0 1005274..1005618 - 114 152990732 - NIS_0987 - dnaK suppressor protein DksA 980 38.29 0 1005732..1006175 + 147 152990733 - NIS_0988 - GatB/Yqey domain-containing protein 981 40.30 0 1006167..1006955 - 262 152990734 - NIS_0989 - indole-3-glycerol phosphate synthase 982 34.29 -1 1006952..1008208 - 418 152990735 - NIS_0990 - hypothetical protein 983 35.14 -1 1008181..1008567 - 128 152990736 - NIS_0991 - hypothetical protein 984 37.32 0 1008552..1009253 - 233 152990737 - NIS_0992 - hypothetical protein 985 39.33 0 1009298..1010014 + 238 152990738 kdsB NIS_0993 - 3-deoxy-D-manno-octulosonate cytidylyltransferase 986 34.16 -1 1009992..1010354 - 120 152990739 - NIS_0994 - hypothetical protein 987 40.08 0 1010363..1010599 - 78 152990740 - NIS_0995 - hypothetical protein 988 38.66 0 1010596..1011402 - 268 152990741 oppC NIS_0996 - oligopeptide ABC transporter, permease 989 35.40 -1 1011399..1011980 - 193 152990742 - NIS_0997 - DNA methylase 990 41.71 0 1012056..1013273 + 405 152990743 argG NIS_0998 - argininosuccinate synthase 991 36.71 0 1013270..1013713 + 147 152990744 rplI NIS_0999 - 50S ribosomal protein L9 992 42.27 0 1013713..1014249 + 178 152990745 hslV NIS_1000 - ATP-dependent protease peptidase subunit 993 40.84 0 1014249..1015580 + 443 152990746 hslU NIS_1001 - ATP-dependent protease ATP-binding subunit 994 37.07 0 1015589..1016470 + 293 152990747 era NIS_1002 - GTP-binding protein Era 995 33.27 -1 1016559..1018076 + 505 152990748 - NIS_1003 - hypothetical protein 996 33.33 -1 1018073..1018708 + 211 152990749 - NIS_1004 - hypothetical protein 997 30.28 -2 1018690..1019115 + 141 152990750 - NIS_1005 - hypothetical protein 998 35.43 -1 1019112..1020635 + 507 152990751 - NIS_1006 - general secretory pathway protein D 999 30.22 -2 1020616..1021419 + 267 152990752 - NIS_1007 - hypothetical protein 1000 30.35 -2 1021412..1022215 + 267 152990753 - NIS_1008 - hypothetical protein 1001 31.90 -1 1022208..1022765 + 185 152990754 - NIS_1009 - hypothetical protein 1002 39.63 0 1022778..1024508 + 576 152990755 - NIS_1010 - general secretory pathway protein E 1003 37.93 0 1024505..1025743 + 412 152990756 - NIS_1011 - general secretory pathway protein F 1004 39.68 0 1025746..1027761 - 671 152990757 - NIS_1012 - ATP-dependent DNA helicase UvrD 1005 41.28 0 1027832..1030447 + 871 152990758 valS NIS_1013 - valyl-tRNA synthetase 1006 42.19 0 1030494..1031972 + 492 152990759 - NIS_1014 - sulfate transporter 1007 39.97 0 1031982..1032659 + 225 152990760 - NIS_1015 - dUTP diphosphatase 1008 43.79 +1 1032774..1034207 + 477 152990761 sufB NIS_1016 - Fe-S cluster assembly protein SufB 1009 38.27 0 1034204..1034953 + 249 152990762 sufC NIS_1017 - Fe-S cluster assembly ATPase SufC 39.50 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0