version 1.0
Nitratiruptor sp. SB155-2, complete genome - 1..1877931 1843 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 812 42.01 0 822575..823795 - 406 152990565 hisS NIS_0818 - histidyl-tRNA synthetase 813 38.54 0 823797..824372 - 191 152990566 tmk NIS_0819 - thymidylate kinase 814 40.34 0 824373..824843 - 156 152990567 coaD NIS_0820 - phosphopantetheine adenylyltransferase 815 41.71 0 824836..825360 - 174 152990568 ubiX NIS_0821 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 816 37.69 0 825422..825949 + 175 152990569 - NIS_0822 - septum formation inhibitor 817 39.09 0 825951..826766 + 271 152990570 minD NIS_0823 - cell division inhibitor MinD 818 37.50 0 826763..827002 + 79 152990571 minE NIS_0824 - cell division topological specificity factor MinE 819 38.41 0 827323..827598 - 91 152990572 hup NIS_0825 - DNA-binding protein HU 820 38.79 0 827798..829906 + 702 152990573 - NIS_0826 - cell division protein FtsK 821 36.49 0 830015..830521 + 168 152990574 - NIS_0827 - hypothetical protein 822 43.37 0 830531..833110 + 859 152990575 acnB NIS_0828 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 823 31.38 -2 833138..833650 - 170 152990576 - NIS_0829 - hypothetical protein 824 41.32 0 833716..836307 + 863 152990577 secA NIS_0830 - preprotein translocase subunit SecA 825 38.33 0 836300..837499 + 399 152990578 - NIS_0831 - hypothetical protein 826 33.57 -1 837500..840034 - 844 152990579 - NIS_0832 - hypothetical protein 827 35.42 -1 839976..840935 + 319 152990580 - NIS_0833 - hypothetical protein 828 40.60 0 841032..843248 + 738 152990581 - NIS_0834 - isocitrate dehydrogenase, NADP-dependent 829 41.69 0 843287..844243 + 318 152990582 mdh NIS_0835 - malate dehydrogenase, NAD-dependent 830 44.10 +1 844243..845106 + 287 152990583 - NIS_0836 - fumarate/tartrate hydratase, alpha subunit 831 42.34 0 845117..845671 + 184 152990584 - NIS_0837 - fumarate/tartrate hydratase, beta subunit 832 43.65 +1 845687..846859 + 390 152990585 sucC NIS_0838 - succinyl-CoA synthase, beta subunit 833 42.15 0 846859..847731 + 290 152990586 sucD NIS_0839 - succinyl-CoA synthase, alpha subunit 834 35.37 -1 847731..848024 + 97 152990587 - NIS_0840 - hypothetical protein 835 40.71 0 848026..848364 + 112 152990588 - NIS_0841 - 2-oxoglutarate-acceptor oxidoreductase subunit OorD 836 42.21 0 848374..849522 + 382 152990589 - NIS_0842 - 2-oxoglutarate-acceptor oxidoreductase subunit OorA 837 39.65 0 849533..850387 + 284 152990590 - NIS_0843 - 2-oxoglutarate-acceptor oxidoreductase subunit OorB 838 41.79 0 850471..851085 + 204 152990591 - NIS_0844 - 2-oxoglutarate-acceptor oxidoreductase subunit OorC 839 32.88 -1 851111..851554 - 147 152990592 - NIS_0845 - hypothetical protein 840 37.78 0 852046..853845 + 599 152990593 ubiD NIS_0846 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD 841 38.27 0 853811..854296 + 161 152990594 - NIS_0847 - methylated-DNA-[protein]-cysteine S-methyltransferase 842 37.40 0 854275..854520 + 81 152990595 - NIS_0848 - RNA-binding S4 protein 843 40.64 0 854520..855491 + 323 152990596 trpD NIS_0849 - anthranilate phosphoribosyltransferase 844 36.09 0 855481..855879 + 132 152990597 - NIS_0850 - hypothetical protein 845 40.94 0 855867..856589 + 240 152990598 - NIS_0851 - ABC transporter, ATP-binding protein 846 39.30 0 856586..857323 + 245 152990599 - NIS_0852 - hypothetical protein 847 38.91 0 857368..858048 + 226 152990600 atpB NIS_0853 - F0F1 ATP synthase subunit A 848 37.21 0 858278..858844 + 188 152990601 - NIS_0854 - thiamine-phosphate pyrophosphorylase 849 33.60 -1 858841..859218 + 125 152990602 - NIS_0855 - hypothetical protein 850 40.32 0 859273..860703 + 476 152990603 - NIS_0856 - aspartyl/glutamyl-tRNA amidotransferase subunit B 851 34.54 -1 860700..862280 + 526 152990604 - NIS_0857 - potassium channel protein 852 36.83 0 862273..862986 + 237 152990605 - NIS_0858 - potassium channel protein 853 40.78 0 862983..863882 + 299 152990606 gpsA NIS_0859 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 854 35.37 -1 863875..864612 + 245 152990607 - NIS_0860 - hypothetical protein 855 39.63 0 864622..865860 + 412 152990608 proA NIS_0861 - glutamate-5-semialdehyde dehydrogenase 856 41.03 0 865857..866441 + 194 152990609 - NIS_0862 - hypothetical protein 857 30.98 -2 866441..866950 + 169 152990610 - NIS_0863 - hypothetical protein 858 33.46 -1 866934..867749 + 271 152990611 - NIS_0864 - chemotaxis protein methyltransferase 859 39.45 0 867760..868086 + 108 152990612 phnA NIS_0865 - alkylphosphonate uptake protein PhnA 860 36.67 0 868070..868669 + 199 152990613 - NIS_0866 - oligopeptide ABC transporter, ATP-binding protein 861 28.99 -2 868672..870627 - 651 152990614 - NIS_0867 - signal transduction response regulator 862 28.24 -2 870631..871101 - 156 152990615 - NIS_0868 - hypothetical protein 863 30.60 -2 871098..872966 - 622 152990616 - NIS_0869 - hypothetical protein 864 37.83 0 873030..873719 - 229 152990617 plsC NIS_0870 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 865 37.18 0 873703..874716 - 337 152990618 - NIS_0871 - hypothetical protein 866 39.43 0 874733..875404 - 223 152990619 - NIS_0872 - phosphoribosylformylglycinamidine synthase, large subunit 867 41.46 0 875401..875646 - 81 152990620 - NIS_0873 - phosphoribosylformylglycinamidine synthase, small subunit 868 38.33 0 875643..876362 - 239 152990621 purC NIS_0874 - phosphoribosylaminoimidazole-succinocarboxamide synthase 869 40.86 0 876359..877660 - 433 152990622 - NIS_0875 - protease 870 41.17 0 877893..880481 + 862 152990623 clpB NIS_0876 - ATP-dependent Clp protease, ATP-binding subunit ClpB 871 32.10 -1 880478..881779 - 433 152990624 - NIS_0877 - hypothetical protein 872 39.26 0 881919..882053 + 44 152990625 rpmH NIS_0878 - 50S ribosomal protein L34 873 36.67 0 882050..882379 + 109 152990626 rnpA NIS_0879 - ribonuclease P protein component 874 33.33 -1 882373..882690 + 105 152990627 - NIS_0880 - hypothetical protein 875 38.06 0 882694..884280 + 528 152990628 - NIS_0881 - putative inner membrane protein translocase component YidC 876 39.27 0 884277..885017 + 246 152990629 - NIS_0882 - hypothetical protein 877 41.50 0 885001..886347 + 448 152990630 trmE NIS_0883 - tRNA modification GTPase TrmE 878 41.48 0 886337..886729 + 130 152990631 - NIS_0884 - Holliday junction resolvase-like protein 879 39.05 0 886719..887138 + 139 152990632 - NIS_0885 - hypothetical protein 880 41.57 0 887104..889362 + 752 152990633 metE NIS_0886 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 881 37.50 0 889400..890215 + 271 152990634 - NIS_0887 - aspartoacylase 882 41.87 0 890354..891232 + 292 152990635 htpX NIS_0888 - heat shock protein HtpX 883 36.59 0 891245..891643 + 132 152990636 - NIS_0889 - hypothetical protein 884 41.23 0 891646..892734 - 362 152990637 - NIS_0890 - carboxypeptidase G2 885 37.22 0 892794..893693 + 299 152990638 - NIS_0891 - hypothetical protein 886 39.23 0 893686..895110 + 474 152990639 - NIS_0892 - hypothetical protein 887 39.09 0 895100..897670 + 856 152990640 - NIS_0893 - hypothetical protein 888 36.48 0 897687..898511 + 274 152990641 - NIS_0894 - hypothetical protein 889 43.52 +1 898572..900779 + 735 152990642 - NIS_0895 - phosphoribosylformylglycinamidine synthase II 890 36.53 0 900807..902621 - 604 152990643 - NIS_0896 - hypothetical protein 891 39.62 0 902661..903614 + 317 152990644 pfkA NIS_0897 - 6-phosphofructokinase 892 33.51 -1 903599..904747 - 382 152990645 - NIS_0898 - two-component sensor histidine kinase 893 39.69 0 904728..905372 - 214 152990646 - NIS_0899 - two-component response regulator 894 36.41 0 907304..907498 - 64 152990647 - NIS_0901 - hypothetical protein 895 39.61 0 907569..910643 - 1024 152990648 - NIS_0902 - CzcA family heavy metal efflux protein 896 36.22 0 910636..911604 - 322 152990649 - NIS_0903 - CzcB family heavy metal efflux protein 897 34.87 -1 911601..912773 - 390 152990650 - NIS_0904 - hypothetical protein 898 35.28 -1 912773..913132 - 119 152990651 - NIS_0905 - hypothetical protein 899 42.29 0 913253..914335 - 360 152990652 - NIS_0906 - hypothetical protein 900 39.95 0 914335..914727 - 130 152990653 - NIS_0907 - cytochrome c, class I 901 35.62 0 914804..915109 + 101 152990654 - NIS_0908 - AsrR family transcriptional regulator 902 32.32 -1 915438..915734 + 98 152990655 - NIS_0909 - hypothetical protein 903 37.25 0 915731..916879 + 382 152990656 - NIS_0910 - hypothetical protein 904 38.86 0 916872..917885 + 337 152990657 - NIS_0911 - CzcB family heavy metal efflux protein 905 42.47 0 917895..920927 + 1010 152990658 - NIS_0912 - CzcA family heavy metal efflux protein 906 32.01 -1 920952..921782 - 276 152990659 - NIS_0913 - two-component sensor histidine kinase 907 32.29 -1 921772..922440 - 222 152990660 - NIS_0914 - two-component response regulator 908 36.97 0 922523..924637 + 704 152990661 - NIS_0915 - signal transduction response regulator 909 37.59 0 924651..926600 + 649 152990662 - NIS_0916 - hypothetical protein 910 35.40 -1 926615..927196 + 193 152990663 - NIS_0917 - protein-glutamate methylesterase 911 30.86 -2 927190..928038 + 282 152990664 - NIS_0918 - chemotaxis protein methyltransferase 39.50 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0