version 1.0
Nitratiruptor sp. SB155-2, complete genome - 1..1877931 1843 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 625 34.88 -1 629160..629675 + 171 152990378 - NIS_0629 - flagellar basal body-associated protein FliL 626 37.70 0 629684..629935 + 83 152990379 - NIS_0630 - flagellar motor switch protein FliN/FliY 627 29.84 -2 629928..630185 + 85 152990380 - NIS_0631 - flagellar biosynthesis protein FliZ 628 34.18 -1 630182..630892 + 236 152990381 fliP NIS_0632 - flagellar transport protein FliP 629 38.15 0 630889..631158 + 89 152990382 fliQ NIS_0633 - flagellar biosynthetic protein FliQ 630 33.72 -1 631155..631922 + 255 152990383 fliR NIS_0634 - flagellar biosynthetic protein FliR 631 37.31 0 631926..632981 + 351 152990384 flhB NIS_0635 - flagellar biosynthetic protein FlhB 632 32.72 -1 632976..634436 - 486 152990385 - NIS_0636 - hypothetical protein 633 30.24 -2 634423..634875 - 150 152990386 - NIS_0637 - hypothetical protein 634 34.77 -1 634823..635239 - 138 152990387 - NIS_0638 - hypothetical protein 635 37.75 0 635236..636276 - 346 152990388 - NIS_0639 - hypothetical protein 636 40.55 0 636452..637990 + 512 152990389 - NIS_0640 - flagellin 637 37.34 0 638088..638486 + 132 152990390 - NIS_0641 - flagellar protein FlaG 638 42.16 0 638497..639855 + 452 152990391 - NIS_0642 - flagellar hook-associated protein 2 FliD 639 35.17 -1 639868..640248 + 126 152990392 fliS NIS_0643 - flagellar protein FliS 640 39.53 0 640499..641740 - 413 152990393 - NIS_0644 - flagellar hook-associated protein 3 FliC 641 38.92 0 641796..643586 - 596 152990394 flgK NIS_0645 - flagellar hook-associated protein 1 FliK 642 33.61 -1 643631..643990 - 119 152990395 - NIS_0646 - hypothetical protein 643 41.00 0 643993..645858 - 621 152990396 glmS NIS_0647 - D-fructose-6-phosphate amidotransferase 644 40.77 0 645871..646932 + 353 152990397 - NIS_0648 - hypothetical protein 645 36.20 0 646932..647384 + 150 152990398 - NIS_0649 - nucleotide phosphoribosyltransferase 646 38.07 0 647365..647934 + 189 152990399 pabA NIS_0650 - anthranilate synthase component II 647 33.25 -1 647934..649097 + 387 152990400 - NIS_0651 - hypothetical protein 648 38.81 0 649217..650548 + 443 152990401 - NIS_0652 - ATP citrate synthase, subunit 1 649 41.03 0 650560..652404 + 614 152990402 - NIS_0653 - ATP citrate synthase, subunit 2 650 35.80 0 652437..653126 + 229 152990403 - NIS_0654 - hypothetical protein 651 35.98 0 653184..654242 + 352 152990404 - NIS_0655 - hypothetical protein 652 37.96 0 659958..660281 + 107 152990405 - NIS_0656 - hypothetical protein 653 38.37 0 660318..661706 + 462 152990406 argH NIS_0657 - argininosuccinate lyase 654 35.56 -1 661715..662074 - 119 152990407 - NIS_0658 - histidine triad family protein 655 39.35 0 662160..663140 + 326 152990408 pheS NIS_0659 - phenylalanyl-tRNA synthetase subunit alpha 656 36.25 0 663137..665467 + 776 152990409 pheT NIS_0660 - phenylalanyl-tRNA synthetase subunit beta 657 42.47 0 665464..666765 + 433 152990410 aroA NIS_0661 - 3-phosphoshikimate 1-carboxyvinyltransferase 658 38.65 0 666755..667582 + 275 152990411 ispH NIS_0662 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 659 37.63 0 667614..669290 + 558 152990412 rpsA NIS_0663 - 30S ribosomal protein S1 660 40.50 0 669299..670888 + 529 152990413 - NIS_0664 - D-3-phosphoglycerate dehydrogenase 661 35.10 -1 670983..672401 + 472 152990414 - NIS_0665 - outer membrane efflux protein 662 36.63 0 672398..673186 + 262 152990415 - NIS_0666 - acriflavin resistance AcrA/AcrE family protein 663 38.56 0 673196..674821 + 541 152990416 - NIS_0667 - acriflavin resistance AcrB/AcrD/AcrF family protein 664 40.26 0 674818..676521 + 567 152990417 - NIS_0668 - acriflavin resistance AcrB/AcrD/AcrF family protein 665 33.33 -1 676521..676721 + 66 152990418 - NIS_0669 - hypothetical protein 666 40.74 0 676749..677315 + 188 152990419 efp NIS_0670 - elongation factor P 667 32.65 -1 677317..677757 + 146 152990420 - NIS_0671 - hypothetical protein 668 44.09 +1 677874..678431 + 185 152990421 thiJ NIS_0672 - 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein 669 37.21 0 678428..678943 - 171 152990422 - NIS_0673 - hypothetical protein 670 37.73 0 678940..679758 - 272 152990423 - NIS_0674 - glycosyl transferase 671 38.93 0 679727..680530 - 267 152990424 - NIS_0675 - HAD-superfamily hydrolase 672 40.13 0 680574..681470 + 298 152990425 - NIS_0676 - tRNA/rRNA cytosine-C5-methylase 673 37.88 0 681465..681992 - 175 152990426 - NIS_0677 - shikimate kinase 674 43.60 +1 682051..685575 + 1174 152990427 dnaE NIS_0678 - DNA polymerase III subunit alpha 675 34.22 -1 685572..686582 - 336 152990428 - NIS_0679 - hypothetical protein 676 43.39 +1 686629..687195 + 188 152990429 - NIS_0680 - hypothetical protein 677 40.40 0 687395..687946 + 183 152990430 - NIS_0681 - hypothetical protein 678 43.50 +1 687970..688992 + 340 152990431 - NIS_0682 - bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 679 29.94 -2 689068..690807 + 579 152990432 - NIS_0683 - hypothetical protein 680 31.88 -1 690868..692244 + 458 152990433 - NIS_0684 - signal transduction response regulator 681 36.61 0 692249..692614 + 121 152990434 - NIS_0685 - thioesterase family protein 682 38.05 0 692574..693761 - 395 152990435 - NIS_0686 - hypothetical protein 683 42.35 0 693758..694345 - 195 152990436 - NIS_0687 - uracil-DNA glycosylase 684 43.34 0 695260..696138 - 292 152990437 - NIS_0688 - succinate dehydrogenase/fumarate reductase, subunit C 685 42.84 0 696149..697105 - 318 152990438 - NIS_0689 - succinate dehydrogenase/fumarate reductase, iron-sulfur protein 686 45.45 +1 697118..698833 - 571 152990439 - NIS_0690 - succinate dehydrogenase/fumarate reductase, flavoprotein subunit 687 39.44 0 698972..699790 + 272 152990440 - NIS_0691 - thiamine monophosphate kinase 688 38.87 0 699799..700881 + 360 152990441 - NIS_0692 - tRNA pseudouridine synthase D 689 44.74 +1 700882..701109 + 75 152990442 - NIS_0693 - hypothetical protein 690 34.85 -1 701118..702569 + 483 152990443 - NIS_0694 - signal transduction response regulator 691 42.63 0 702562..703239 - 225 152990444 - NIS_0695 - hypothetical protein 692 41.78 0 703232..704296 - 354 152990445 - NIS_0696 - membrane-associated zinc metalloprotease 693 40.91 0 704296..704823 - 175 152990446 pgsA NIS_0697 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 694 45.62 +1 704823..705587 - 254 152990447 - NIS_0698 - 7-alpha-hydroxysteroid dehydrogenase 695 45.54 +1 705587..706471 - 294 152990448 dapA NIS_0699 - dihydrodipicolinate synthase 696 40.18 0 706471..707769 - 432 152990449 - NIS_0700 - M16 family peptidase 697 41.76 0 707766..708821 - 351 152990450 pyrD NIS_0701 - dihydroorotate dehydrogenase 2 698 42.11 0 708883..709965 + 360 152990451 trmA NIS_0702 - tRNA (uracil-5-)-methyltransferase 699 43.99 +1 709955..711052 - 365 152990452 - NIS_0703 - GTP-binding protein 700 42.60 0 711119..712597 - 492 152990453 - NIS_0704 - leucyl aminopeptidase 701 39.23 0 712611..713288 - 225 152990454 - NIS_0705 - hypothetical protein 702 45.33 +1 713296..714495 - 399 152990455 trpB NIS_0706 - tryptophan synthase subunit beta 703 40.44 0 714495..715043 - 182 152990456 apt NIS_0707 - adenine phosphoribosyltransferase 704 44.22 +1 715131..715571 - 146 152990457 rpiB NIS_0708 - ribose 5-phosphate isomerase B 705 41.09 0 715573..716268 - 231 152990458 - NIS_0709 - peptidase M50 706 42.43 0 716255..717100 - 281 152990459 lepB NIS_0710 - signal peptidase I 707 43.93 +1 717097..717945 - 282 152990460 folD NIS_0711 - 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase 708 33.62 -1 718023..718367 + 114 152990461 - NIS_0712 - hypothetical protein 709 41.43 0 718364..719302 + 312 152990462 citE NIS_0713 - citrate lyase beta chain 710 44.64 +1 719279..719782 - 167 152990463 - NIS_0714 - Ni-Fe hydrogenase, small subunit HycG 711 39.63 0 719779..721143 - 454 152990464 - NIS_0715 - Ni-Fe hydrogenase, large subunit HycE 712 39.03 0 721153..722556 - 467 152990465 - NIS_0716 - Ni-Fe hydrogenase, membrane subunit HyfF 713 37.93 0 722549..723136 - 195 152990466 - NIS_0717 - Ni-Fe hydrogenase, membrane subunit HyfE 714 40.50 0 723138..724058 - 306 152990467 - NIS_0718 - Ni-Fe hydrogenase, membrane subunit HycD/HyfD 715 39.23 0 724055..725935 - 626 152990468 - NIS_0719 - Ni-Fe hydrogenase, membrane subunit HycC/HyfB 716 34.65 -1 726079..726915 - 278 152990469 - NIS_0720 - hypothetical protein 717 44.63 +1 726975..728258 + 427 152990470 hemL NIS_0721 - glutamate-1-semialdehyde aminotransferase 718 43.10 0 728255..728551 + 98 152990471 - NIS_0722 - hypothetical protein 719 36.95 0 728548..729045 + 165 152990472 - NIS_0723 - hypothetical protein 720 40.18 0 729047..730873 - 608 152990473 rpoD NIS_0724 - RNA polymerase sigma factor RpoD 721 35.60 -1 731188..732246 - 352 152990474 - NIS_0725 - hypothetical protein 722 41.99 0 732374..732835 + 153 152990475 leuD NIS_0726 - 3-isopropylmalate dehydratase, small subunit 723 43.98 +1 732873..733943 + 356 152990476 leuB NIS_0727 - 3-isopropylmalate dehydrogenase 724 38.00 0 733927..735105 + 392 152990477 - NIS_0728 - RNA nucleotidyltransferase 39.50 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0