version 1.0
Nitratiruptor sp. SB155-2, complete genome - 1..1877931 1843 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 299 35.67 0 296856..297755 - 299 152990052 miaA NIS_0303 - tRNA delta(2)-isopentenylpyrophosphate transferase 300 39.61 0 297799..298659 + 286 152990053 ubiA NIS_0304 - prenyltransferase 301 31.05 -2 298767..300650 - 627 152990054 - NIS_0305 - signal transduction response regulator 302 30.24 -2 300647..301066 - 139 152990055 - NIS_0306 - hypothetical protein 303 32.85 -1 301063..302925 - 620 152990056 - NIS_0307 - hypothetical protein 304 27.58 -2 303246..303575 + 109 152990057 - NIS_0308 - hypothetical protein 305 35.63 0 303639..304292 + 217 152990058 - NIS_0309 - carbonate dehydratase 306 37.18 0 304293..305930 + 545 152990059 - NIS_0310 - sulfate transporter 307 38.65 0 306709..307893 - 394 152990060 murD NIS_0311 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 308 40.56 0 307893..308957 - 354 152990061 mraY NIS_0312 - phospho-N-acetylmuramoyl-pentapeptide-transferase 309 43.95 +1 309037..309780 + 247 152990062 fabG NIS_0313 - 3-ketoacyl-(acyl-carrier-protein) reductase 310 37.55 0 309830..310066 + 78 152990063 acpP NIS_0314 - acyl carrier protein ACP 311 45.75 +1 310141..311364 + 407 152990064 fabF NIS_0315 - 3-oxoacyl-(acyl carrier protein) synthase II 312 45.09 +1 311367..312302 + 311 152990065 accA NIS_0316 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 313 37.66 0 312332..312562 - 76 152990066 - NIS_0317 - hypothetical protein 314 42.36 0 312595..313779 - 394 152990067 argJ NIS_0318 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 315 34.31 -1 313822..314025 - 67 152990068 rpmB NIS_0319 - 50S ribosomal protein L28 316 42.88 0 314157..314795 + 212 152990069 rpe NIS_0320 - ribulose-phosphate 3-epimerase 317 42.30 0 314797..315387 + 196 152990070 trpF NIS_0321 - phosphoribosylanthranilate isomerase 318 38.75 0 315380..316210 + 276 152990071 dnaQ NIS_0322 - DNA polymerase III subunit epsilon 319 42.02 0 316146..317342 - 398 152990072 - NIS_0323 - Na+/H+:dicarboxylate/amino acid symporter 320 38.45 0 317315..318115 - 266 152990073 - NIS_0324 - hypothetical protein 321 34.44 -1 318155..318334 - 59 152990074 - NIS_0325 - hypothetical protein 322 45.12 +1 318350..319825 - 491 152990075 - NIS_0326 - sulfide-quinone reductase 323 44.88 +1 319960..320496 - 178 152990076 - NIS_0327 - hexapaptide repeat-containing transferase 324 42.49 0 320496..322592 - 698 152990077 ppk NIS_0328 - polyphosphate kinase 325 43.24 0 322674..323309 + 211 152990078 - NIS_0329 - carbonate dehydratase 326 45.40 +1 323296..325326 - 676 152990079 uvrB NIS_0330 - excinuclease ABC subunit B 327 36.99 0 325395..325613 + 72 152990080 - NIS_0331 - hypothetical protein 328 34.29 -1 325616..325825 + 69 152990081 - NIS_0332 - hypothetical protein 329 40.09 0 325902..326360 + 152 152990082 - NIS_0333 - hypothetical protein 330 41.16 0 326364..326810 + 148 152990083 - NIS_0334 - hypothetical protein 331 38.98 0 326872..327225 + 117 152990084 - NIS_0335 - hypothetical protein 332 43.32 0 327225..329057 + 610 152990085 priA NIS_0336 - primosome assembly protein PriA 333 46.36 +1 329090..330148 + 352 152990086 ispG NIS_0337 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 334 44.63 +1 330152..331567 + 471 152990087 dnaB NIS_0338 - replicative DNA helicase 335 37.36 0 331567..332808 + 413 152990088 - NIS_0339 - DNA uptake protein 336 36.41 0 332710..333555 - 281 152990089 rbn NIS_0340 - ribonuclease BN 337 45.34 +1 333815..335197 - 460 152990090 glcD NIS_0341 - glycolate oxidase, subunit GlcD 338 39.42 0 335197..335886 - 229 152990091 - NIS_0342 - hypothetical protein 339 43.22 0 336025..337278 + 417 152990092 - NIS_0343 - M24/M37 family peptidase 340 43.23 0 337241..338584 + 447 152990093 - NIS_0344 - magnesium transporter 341 41.76 0 338586..339131 + 181 152990094 - NIS_0345 - hypothetical protein 342 39.20 0 339118..339594 - 158 152990095 - NIS_0346 - globin 343 42.68 0 339584..340450 - 288 152990096 - NIS_0347 - hydrolase 344 44.32 +1 340447..341238 - 263 152990097 - NIS_0348 - Mn2+/Zn2+ ABC transporter, permease 345 40.08 0 341231..341956 - 241 152990098 - NIS_0349 - Mn2+/Zn2+ ABC transporter, ATP-binding protein 346 38.25 0 341940..342773 - 277 152990099 - NIS_0350 - Mn2+/Zn2+ ABC transporter, substrate-binding protein 347 42.60 0 342798..343736 - 312 152990100 - NIS_0351 - peptidyl-arginine deiminase family protein 348 32.91 -1 343832..344068 + 78 152990101 - NIS_0352 - hypothetical protein 349 29.49 -2 344061..344372 + 103 152990102 - NIS_0353 - PemK family transcriptional regulator 350 31.19 -2 344702..345634 + 310 152990103 - NIS_0354 - hypothetical protein 351 41.54 0 345677..346675 + 332 152990104 - NIS_0355 - alanine racemase 352 38.67 0 346653..347027 - 124 152990105 - NIS_0356 - hypothetical protein 353 37.81 0 347027..347227 - 66 152990106 - NIS_0357 - hypothetical protein 354 39.56 0 347217..347762 - 181 152990107 gidB NIS_0358 - glucose-inhibited division protein B 355 41.49 0 347762..348325 - 187 152990108 ribA NIS_0359 - GTP cyclohydrolase II 356 46.79 +1 348386..349351 + 321 152990109 hemB NIS_0360 - delta-aminolevulinic acid dehydratase 357 44.41 +1 349384..350313 + 309 152990110 - NIS_0361 - ornithine carbamoyltransferase 358 39.78 0 350310..351473 + 387 152990111 - NIS_0362 - hypothetical protein 359 38.55 0 351484..351981 + 165 152990112 - NIS_0363 - hypothetical protein 360 44.01 +1 351978..353345 + 455 152990113 hemN NIS_0364 - coproporphyrinogen III oxidase 361 40.03 0 353342..355537 + 731 152990114 - NIS_0365 - hypothetical protein 362 39.99 0 355534..358101 + 855 152990115 - NIS_0366 - ATP-dependent DNA helicase UvrD 363 41.41 0 358104..359378 + 424 152990116 - NIS_0367 - anaerobic glycerol-3-phosphate dehydrogenase subunit C 364 40.49 0 359432..360172 + 246 152990117 - NIS_0368 - carbonate dehydratase 365 36.26 0 360182..361684 + 500 152990118 - NIS_0369 - methyl-accepting chemotaxis protein 366 37.21 0 361722..362546 + 274 152990119 lgt NIS_0370 - prolipoprotein diacylglyceryl transferase 367 36.97 0 362666..363709 - 347 152990120 - NIS_0371 - hypothetical protein 368 44.44 +1 363717..364724 - 335 152990121 ruvB NIS_0372 - Holliday junction DNA helicase B 369 43.97 +1 364724..365503 - 259 152990122 panB NIS_0373 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 370 39.68 0 365582..366322 + 246 152990123 trpA NIS_0374 - tryptophan synthase, alpha chain 371 37.05 0 366718..367659 - 313 152990124 - NIS_0375 - para-aminobenzoate synthase component I 372 39.70 0 367652..368530 - 292 152990125 pyrB NIS_0376 - aspartate carbamoyltransferase catalytic subunit 373 43.56 +1 368605..369093 + 162 152990126 - NIS_0377 - hypothetical protein 374 39.12 0 369055..369693 - 212 152990127 - NIS_0378 - dethiobiotin synthetase 375 41.16 0 369762..370055 + 97 152990128 clpS NIS_0379 - ATP-dependent Clp protease, adaptor protein ClpS 376 42.51 0 370055..372244 + 729 152990129 clpA NIS_0380 - ATP-dependent Clp protease, ATP-binding subunit ClpA 377 41.88 0 372241..372930 + 229 152990130 aat NIS_0381 - leucyl/phenylalanyl-tRNA--protein transferase 378 39.14 0 372962..373942 + 326 152990131 tal NIS_0382 - transaldolase 379 41.54 0 373958..375139 + 393 152990132 pilT NIS_0383 - twitching motility protein PilT 380 42.27 0 375205..375741 + 178 152990133 rplY NIS_0384 - 50S ribosomal protein L25/general stress protein Ctc 381 42.86 0 375741..376307 + 188 152990134 pth NIS_0385 - peptidyl-tRNA hydrolase 382 35.47 -1 376353..377384 + 343 152990135 - NIS_0386 - hypothetical protein 383 41.31 0 377428..378630 + 400 152990136 - NIS_0387 - diaminopimelate decarboxylase 384 39.28 0 378627..379400 + 257 152990137 - NIS_0388 - HAD-superfamily hydrolase 385 40.72 0 379400..380482 + 360 152990138 pheA NIS_0389 - chorismate mutase/prephenate dehydratase 386 39.96 0 380469..381569 + 366 152990139 hisC NIS_0390 - histidinol-phosphate aminotransferase 387 42.33 0 381559..383358 + 599 152990140 dxs NIS_0391 - 1-deoxy-D-xylulose-5-phosphate synthase 388 42.17 0 383381..383980 - 199 152990141 - NIS_0392 - AhpC/TSA family peroxiredoxin 389 43.07 0 384147..385307 + 386 152990142 metK NIS_0393 - S-adenosylmethionine synthetase 390 43.16 0 385366..385650 + 94 152990143 - NIS_0394 - 4Fe-4S ferredoxin 391 37.20 0 385755..386168 + 137 152990144 ndk NIS_0395 - nucleoside-diphosphate kinase 392 37.01 0 386170..386550 + 126 152990145 - NIS_0396 - hypothetical protein 393 37.33 0 386537..386686 + 49 152990146 rpmF NIS_0397 - 50S ribosomal protein L32 394 38.44 0 386697..387695 + 332 152990147 plsX NIS_0398 - putative glycerol-3-phosphate acyltransferase PlsX 395 39.44 0 387699..388697 + 332 152990148 fabH NIS_0399 - 3-oxoacyl-(acyl carrier protein) synthase III 396 43.46 +1 394552..395499 + 315 152990149 - NIS_0400 - AAA family ATPase 397 39.09 0 395496..396329 + 277 152990150 - NIS_0401 - hypothetical protein 398 33.86 -1 396329..396709 + 126 152990151 - NIS_0402 - hypothetical protein 39.50 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0