version 1.0
Nitratiruptor sp. SB155-2, complete genome - 1..1877931 1843 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 264 40.57 0 253012..257172 + 1386 152990017 rpoB NIS_0268 - DNA-directed RNA polymerase subunit beta 265 42.00 0 257150..261673 + 1507 152990018 rpoC NIS_0269 - DNA-directed RNA polymerase, beta' subunit 266 40.80 0 261763..262137 + 124 152990019 rpsL NIS_0270 - 30S ribosomal protein S12 267 39.49 0 262246..262716 + 156 152990020 rpsG NIS_0271 - 30S ribosomal protein S7 268 42.14 0 262818..264896 + 692 152990021 fusA NIS_0272 - elongation factor G 269 38.77 0 265347..266432 + 361 152990022 cheB NIS_0273 - protein-glutamate methylesterase CheB 270 29.90 -2 266407..266931 + 174 152990023 - NIS_0274 - hypothetical protein 271 31.51 -2 266924..267745 + 273 152990024 - NIS_0275 - chemotaxis protein methyltransferase 272 31.19 -2 267742..269046 - 434 152990025 - NIS_0276 - hypothetical protein 273 35.97 0 269049..270941 - 630 152990026 - NIS_0277 - methyl-accepting chemotaxis protein 274 43.70 +1 271181..271450 + 89 152990027 - NIS_0278 - RNA-binding protein RNP-1 275 38.19 0 271480..272736 - 418 152990028 - NIS_0279 - DNA polymerase IV 276 41.36 0 272853..273512 + 219 152990029 - NIS_0280 - phage repressor protein 277 41.10 0 273509..274255 + 248 152990030 - NIS_0281 - hypothetical protein 278 37.94 0 274234..274689 + 151 152990031 - NIS_0282 - hypothetical protein 279 40.77 0 274686..275936 - 416 152990032 - NIS_0283 - UDP-glucose/GDP-mannose dehydrogenase 280 38.83 0 275933..276241 - 102 152990033 - NIS_0284 - hypothetical protein 281 35.43 -1 276287..276763 + 158 152990034 - NIS_0285 - hypothetical protein 282 41.73 0 276756..277601 + 281 152990035 nfo NIS_0286 - endonuclease IV 283 39.34 0 277604..279334 + 576 152990036 - NIS_0287 - AAA family ATPase 284 40.46 0 279469..279861 + 130 152990037 nuoA NIS_0288 - NADH dehydrogenase subunit A 285 44.90 +1 279843..280352 + 169 152990038 nuoB NIS_0289 - NADH dehydrogenase subunit B 286 42.05 0 280352..281143 + 263 152990039 nuoC NIS_0290 - NADH dehydrogenase subunit C 287 45.01 +1 281153..282385 + 410 152990040 nuoD NIS_0291 - NADH dehydrogenase subunit D 288 38.68 0 282399..282641 + 80 152990041 - NIS_0292 - hypothetical protein 289 44.98 +1 282654..284696 + 680 152990042 - NIS_0293 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 290 42.38 0 284706..286982 + 758 152990043 - NIS_0294 - NADH-quinone oxidoreductase, chain G 291 42.27 0 286975..289458 + 827 152990044 nuoG NIS_0295 - NADH dehydrogenase subunit G 292 43.81 +1 289460..290452 + 330 152990045 nuoH NIS_0296 - NADH dehydrogenase subunit H 293 38.89 0 290462..291073 + 203 152990046 nuoI NIS_0297 - NADH dehydrogenase subunit I 294 39.82 0 291085..291639 + 184 152990047 nuoJ NIS_0298 - NADH dehydrogenase subunit J 295 37.62 0 291636..291938 + 100 152990048 nuoK NIS_0299 - NADH dehydrogenase subunit K 296 40.45 0 291942..293837 + 631 152990049 nuoL NIS_0300 - NADH dehydrogenase subunit L 297 38.18 0 293849..295375 + 508 152990050 nuoM NIS_0301 - NADH dehydrogenase subunit M 298 39.80 0 295375..296859 + 494 152990051 nuoN NIS_0302 - NADH dehydrogenase subunit N 299 35.67 0 296856..297755 - 299 152990052 miaA NIS_0303 - tRNA delta(2)-isopentenylpyrophosphate transferase 300 39.61 0 297799..298659 + 286 152990053 ubiA NIS_0304 - prenyltransferase 301 31.05 -2 298767..300650 - 627 152990054 - NIS_0305 - signal transduction response regulator 302 30.24 -2 300647..301066 - 139 152990055 - NIS_0306 - hypothetical protein 303 32.85 -1 301063..302925 - 620 152990056 - NIS_0307 - hypothetical protein 304 27.58 -2 303246..303575 + 109 152990057 - NIS_0308 - hypothetical protein 305 35.63 0 303639..304292 + 217 152990058 - NIS_0309 - carbonate dehydratase 306 37.18 0 304293..305930 + 545 152990059 - NIS_0310 - sulfate transporter 307 38.65 0 306709..307893 - 394 152990060 murD NIS_0311 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 308 40.56 0 307893..308957 - 354 152990061 mraY NIS_0312 - phospho-N-acetylmuramoyl-pentapeptide-transferase 309 43.95 +1 309037..309780 + 247 152990062 fabG NIS_0313 - 3-ketoacyl-(acyl-carrier-protein) reductase 310 37.55 0 309830..310066 + 78 152990063 acpP NIS_0314 - acyl carrier protein ACP 311 45.75 +1 310141..311364 + 407 152990064 fabF NIS_0315 - 3-oxoacyl-(acyl carrier protein) synthase II 312 45.09 +1 311367..312302 + 311 152990065 accA NIS_0316 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 313 37.66 0 312332..312562 - 76 152990066 - NIS_0317 - hypothetical protein 314 42.36 0 312595..313779 - 394 152990067 argJ NIS_0318 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 315 34.31 -1 313822..314025 - 67 152990068 rpmB NIS_0319 - 50S ribosomal protein L28 316 42.88 0 314157..314795 + 212 152990069 rpe NIS_0320 - ribulose-phosphate 3-epimerase 317 42.30 0 314797..315387 + 196 152990070 trpF NIS_0321 - phosphoribosylanthranilate isomerase 318 38.75 0 315380..316210 + 276 152990071 dnaQ NIS_0322 - DNA polymerase III subunit epsilon 319 42.02 0 316146..317342 - 398 152990072 - NIS_0323 - Na+/H+:dicarboxylate/amino acid symporter 320 38.45 0 317315..318115 - 266 152990073 - NIS_0324 - hypothetical protein 321 34.44 -1 318155..318334 - 59 152990074 - NIS_0325 - hypothetical protein 322 45.12 +1 318350..319825 - 491 152990075 - NIS_0326 - sulfide-quinone reductase 323 44.88 +1 319960..320496 - 178 152990076 - NIS_0327 - hexapaptide repeat-containing transferase 324 42.49 0 320496..322592 - 698 152990077 ppk NIS_0328 - polyphosphate kinase 325 43.24 0 322674..323309 + 211 152990078 - NIS_0329 - carbonate dehydratase 326 45.40 +1 323296..325326 - 676 152990079 uvrB NIS_0330 - excinuclease ABC subunit B 327 36.99 0 325395..325613 + 72 152990080 - NIS_0331 - hypothetical protein 328 34.29 -1 325616..325825 + 69 152990081 - NIS_0332 - hypothetical protein 329 40.09 0 325902..326360 + 152 152990082 - NIS_0333 - hypothetical protein 330 41.16 0 326364..326810 + 148 152990083 - NIS_0334 - hypothetical protein 331 38.98 0 326872..327225 + 117 152990084 - NIS_0335 - hypothetical protein 332 43.32 0 327225..329057 + 610 152990085 priA NIS_0336 - primosome assembly protein PriA 333 46.36 +1 329090..330148 + 352 152990086 ispG NIS_0337 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 334 44.63 +1 330152..331567 + 471 152990087 dnaB NIS_0338 - replicative DNA helicase 335 37.36 0 331567..332808 + 413 152990088 - NIS_0339 - DNA uptake protein 336 36.41 0 332710..333555 - 281 152990089 rbn NIS_0340 - ribonuclease BN 337 45.34 +1 333815..335197 - 460 152990090 glcD NIS_0341 - glycolate oxidase, subunit GlcD 338 39.42 0 335197..335886 - 229 152990091 - NIS_0342 - hypothetical protein 339 43.22 0 336025..337278 + 417 152990092 - NIS_0343 - M24/M37 family peptidase 340 43.23 0 337241..338584 + 447 152990093 - NIS_0344 - magnesium transporter 341 41.76 0 338586..339131 + 181 152990094 - NIS_0345 - hypothetical protein 342 39.20 0 339118..339594 - 158 152990095 - NIS_0346 - globin 343 42.68 0 339584..340450 - 288 152990096 - NIS_0347 - hydrolase 344 44.32 +1 340447..341238 - 263 152990097 - NIS_0348 - Mn2+/Zn2+ ABC transporter, permease 345 40.08 0 341231..341956 - 241 152990098 - NIS_0349 - Mn2+/Zn2+ ABC transporter, ATP-binding protein 346 38.25 0 341940..342773 - 277 152990099 - NIS_0350 - Mn2+/Zn2+ ABC transporter, substrate-binding protein 347 42.60 0 342798..343736 - 312 152990100 - NIS_0351 - peptidyl-arginine deiminase family protein 348 32.91 -1 343832..344068 + 78 152990101 - NIS_0352 - hypothetical protein 349 29.49 -2 344061..344372 + 103 152990102 - NIS_0353 - PemK family transcriptional regulator 350 31.19 -2 344702..345634 + 310 152990103 - NIS_0354 - hypothetical protein 351 41.54 0 345677..346675 + 332 152990104 - NIS_0355 - alanine racemase 352 38.67 0 346653..347027 - 124 152990105 - NIS_0356 - hypothetical protein 353 37.81 0 347027..347227 - 66 152990106 - NIS_0357 - hypothetical protein 354 39.56 0 347217..347762 - 181 152990107 gidB NIS_0358 - glucose-inhibited division protein B 355 41.49 0 347762..348325 - 187 152990108 ribA NIS_0359 - GTP cyclohydrolase II 356 46.79 +1 348386..349351 + 321 152990109 hemB NIS_0360 - delta-aminolevulinic acid dehydratase 357 44.41 +1 349384..350313 + 309 152990110 - NIS_0361 - ornithine carbamoyltransferase 358 39.78 0 350310..351473 + 387 152990111 - NIS_0362 - hypothetical protein 359 38.55 0 351484..351981 + 165 152990112 - NIS_0363 - hypothetical protein 360 44.01 +1 351978..353345 + 455 152990113 hemN NIS_0364 - coproporphyrinogen III oxidase 361 40.03 0 353342..355537 + 731 152990114 - NIS_0365 - hypothetical protein 362 39.99 0 355534..358101 + 855 152990115 - NIS_0366 - ATP-dependent DNA helicase UvrD 363 41.41 0 358104..359378 + 424 152990116 - NIS_0367 - anaerobic glycerol-3-phosphate dehydrogenase subunit C 39.50 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0