version 1.0
Nitratiruptor sp. SB155-2, complete genome - 1..1877931 1843 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 229 39.57 0 231528..231896 + 122 152989982 rplN NIS_0233 - 50S ribosomal protein L14 230 38.75 0 231896..232135 + 79 152989983 rplX NIS_0234 - 50S ribosomal protein L24 231 40.22 0 232132..232683 + 183 152989984 rplE NIS_0235 - 50S ribosomal protein L5 232 38.17 0 232683..232868 + 61 152989985 rpsN NIS_0236 - 30S ribosomal protein S14 233 33.33 -1 232927..233331 + 134 152989986 rpsH NIS_0237 - 30S ribosomal protein S8 234 39.48 0 233380..233916 + 178 152989987 rplF NIS_0238 - 50S ribosomal protein L6 235 38.38 0 233927..234283 + 118 152989988 rplR NIS_0239 - 50S ribosomal protein L18 236 38.29 0 234293..234736 + 147 152989989 rpsE NIS_0240 - 30S ribosomal protein S5 237 38.56 0 234740..235141 + 133 152989990 rplO NIS_0241 - 50S ribosomal protein L15 238 40.14 0 235141..236403 + 420 152989991 secY NIS_0242 - preprotein translocase subunit SecY 239 40.68 0 236403..237164 + 253 152989992 map NIS_0243 - methionine aminopeptidase 240 38.81 0 237165..237383 + 72 152989993 infA NIS_0244 - translation initiation factor IF-1 241 34.21 -1 237542..237655 + 37 152989994 rpmJ NIS_0245 - 50S ribosomal protein L36 242 38.02 0 237659..238021 + 120 152989995 rpsM NIS_0246 - 30S ribosomal protein S13 243 40.20 0 238033..238425 + 130 152989996 rpsK NIS_0247 - 30S ribosomal protein S11 244 40.35 0 238481..239107 + 208 152989997 rpsD NIS_0248 - 30S ribosomal protein S4 245 36.47 0 239139..240125 + 328 152989998 rpoA NIS_0249 - DNA-directed RNA polymerase subunit alpha 246 39.03 0 240136..240486 + 116 152989999 rplQ NIS_0250 - 50S ribosomal protein L17 247 41.25 0 240586..240888 + 100 152990000 - NIS_0251 - hypothetical protein 248 33.16 -1 240889..241449 + 186 152990001 - NIS_0252 - hypothetical protein 249 37.82 0 241446..242738 + 430 152990002 murE NIS_0253 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 250 40.57 0 242838..243224 + 128 152990003 - NIS_0254 - 2Fe-2S ferredoxin 251 40.16 0 243227..243592 + 121 152990004 panD NIS_0255 - aspartate alpha-decarboxylase 252 36.22 0 243604..243915 + 103 152990005 - NIS_0256 - hypothetical protein 253 38.95 0 243916..244788 + 290 152990006 ispA NIS_0257 - geranyltranstransferase 254 42.71 0 244792..246732 + 646 152990007 - NIS_0258 - transketolase 255 35.69 0 246831..247889 + 352 152990008 - NIS_0259 - hypothetical protein 256 41.92 0 248459..249658 + 399 152990009 tufA NIS_0260 - elongation factor Tu 257 30.07 -2 249695..249847 + 50 152990010 rpmG NIS_0261 - 50S ribosomal protein L33 258 31.67 -2 249970..250149 + 59 152990011 secE NIS_0262 - preprotein translocase subunit SecE 259 36.53 0 250162..250692 + 176 152990012 nusG NIS_0263 - transcription antitermination protein NusG 260 38.03 0 250713..251138 + 141 152990013 rplK NIS_0264 - 50S ribosomal protein L11 261 40.68 0 251194..251901 + 235 152990014 rplA NIS_0265 - 50S ribosomal protein L1 262 41.52 0 251977..252489 + 170 152990015 rplJ NIS_0266 - 50S ribosomal protein L10 263 37.50 0 252510..252893 + 127 152990016 rplL NIS_0267 - 50S ribosomal protein L7/L12 264 40.57 0 253012..257172 + 1386 152990017 rpoB NIS_0268 - DNA-directed RNA polymerase subunit beta 265 42.00 0 257150..261673 + 1507 152990018 rpoC NIS_0269 - DNA-directed RNA polymerase, beta' subunit 266 40.80 0 261763..262137 + 124 152990019 rpsL NIS_0270 - 30S ribosomal protein S12 267 39.49 0 262246..262716 + 156 152990020 rpsG NIS_0271 - 30S ribosomal protein S7 268 42.14 0 262818..264896 + 692 152990021 fusA NIS_0272 - elongation factor G 269 38.77 0 265347..266432 + 361 152990022 cheB NIS_0273 - protein-glutamate methylesterase CheB 270 29.90 -2 266407..266931 + 174 152990023 - NIS_0274 - hypothetical protein 271 31.51 -2 266924..267745 + 273 152990024 - NIS_0275 - chemotaxis protein methyltransferase 272 31.19 -2 267742..269046 - 434 152990025 - NIS_0276 - hypothetical protein 273 35.97 0 269049..270941 - 630 152990026 - NIS_0277 - methyl-accepting chemotaxis protein 274 43.70 +1 271181..271450 + 89 152990027 - NIS_0278 - RNA-binding protein RNP-1 275 38.19 0 271480..272736 - 418 152990028 - NIS_0279 - DNA polymerase IV 276 41.36 0 272853..273512 + 219 152990029 - NIS_0280 - phage repressor protein 277 41.10 0 273509..274255 + 248 152990030 - NIS_0281 - hypothetical protein 278 37.94 0 274234..274689 + 151 152990031 - NIS_0282 - hypothetical protein 279 40.77 0 274686..275936 - 416 152990032 - NIS_0283 - UDP-glucose/GDP-mannose dehydrogenase 280 38.83 0 275933..276241 - 102 152990033 - NIS_0284 - hypothetical protein 281 35.43 -1 276287..276763 + 158 152990034 - NIS_0285 - hypothetical protein 282 41.73 0 276756..277601 + 281 152990035 nfo NIS_0286 - endonuclease IV 283 39.34 0 277604..279334 + 576 152990036 - NIS_0287 - AAA family ATPase 284 40.46 0 279469..279861 + 130 152990037 nuoA NIS_0288 - NADH dehydrogenase subunit A 285 44.90 +1 279843..280352 + 169 152990038 nuoB NIS_0289 - NADH dehydrogenase subunit B 286 42.05 0 280352..281143 + 263 152990039 nuoC NIS_0290 - NADH dehydrogenase subunit C 287 45.01 +1 281153..282385 + 410 152990040 nuoD NIS_0291 - NADH dehydrogenase subunit D 288 38.68 0 282399..282641 + 80 152990041 - NIS_0292 - hypothetical protein 289 44.98 +1 282654..284696 + 680 152990042 - NIS_0293 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 290 42.38 0 284706..286982 + 758 152990043 - NIS_0294 - NADH-quinone oxidoreductase, chain G 291 42.27 0 286975..289458 + 827 152990044 nuoG NIS_0295 - NADH dehydrogenase subunit G 292 43.81 +1 289460..290452 + 330 152990045 nuoH NIS_0296 - NADH dehydrogenase subunit H 293 38.89 0 290462..291073 + 203 152990046 nuoI NIS_0297 - NADH dehydrogenase subunit I 294 39.82 0 291085..291639 + 184 152990047 nuoJ NIS_0298 - NADH dehydrogenase subunit J 295 37.62 0 291636..291938 + 100 152990048 nuoK NIS_0299 - NADH dehydrogenase subunit K 296 40.45 0 291942..293837 + 631 152990049 nuoL NIS_0300 - NADH dehydrogenase subunit L 297 38.18 0 293849..295375 + 508 152990050 nuoM NIS_0301 - NADH dehydrogenase subunit M 298 39.80 0 295375..296859 + 494 152990051 nuoN NIS_0302 - NADH dehydrogenase subunit N 299 35.67 0 296856..297755 - 299 152990052 miaA NIS_0303 - tRNA delta(2)-isopentenylpyrophosphate transferase 300 39.61 0 297799..298659 + 286 152990053 ubiA NIS_0304 - prenyltransferase 301 31.05 -2 298767..300650 - 627 152990054 - NIS_0305 - signal transduction response regulator 302 30.24 -2 300647..301066 - 139 152990055 - NIS_0306 - hypothetical protein 303 32.85 -1 301063..302925 - 620 152990056 - NIS_0307 - hypothetical protein 304 27.58 -2 303246..303575 + 109 152990057 - NIS_0308 - hypothetical protein 305 35.63 0 303639..304292 + 217 152990058 - NIS_0309 - carbonate dehydratase 306 37.18 0 304293..305930 + 545 152990059 - NIS_0310 - sulfate transporter 307 38.65 0 306709..307893 - 394 152990060 murD NIS_0311 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 308 40.56 0 307893..308957 - 354 152990061 mraY NIS_0312 - phospho-N-acetylmuramoyl-pentapeptide-transferase 309 43.95 +1 309037..309780 + 247 152990062 fabG NIS_0313 - 3-ketoacyl-(acyl-carrier-protein) reductase 310 37.55 0 309830..310066 + 78 152990063 acpP NIS_0314 - acyl carrier protein ACP 311 45.75 +1 310141..311364 + 407 152990064 fabF NIS_0315 - 3-oxoacyl-(acyl carrier protein) synthase II 312 45.09 +1 311367..312302 + 311 152990065 accA NIS_0316 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 313 37.66 0 312332..312562 - 76 152990066 - NIS_0317 - hypothetical protein 314 42.36 0 312595..313779 - 394 152990067 argJ NIS_0318 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 315 34.31 -1 313822..314025 - 67 152990068 rpmB NIS_0319 - 50S ribosomal protein L28 316 42.88 0 314157..314795 + 212 152990069 rpe NIS_0320 - ribulose-phosphate 3-epimerase 317 42.30 0 314797..315387 + 196 152990070 trpF NIS_0321 - phosphoribosylanthranilate isomerase 318 38.75 0 315380..316210 + 276 152990071 dnaQ NIS_0322 - DNA polymerase III subunit epsilon 319 42.02 0 316146..317342 - 398 152990072 - NIS_0323 - Na+/H+:dicarboxylate/amino acid symporter 320 38.45 0 317315..318115 - 266 152990073 - NIS_0324 - hypothetical protein 321 34.44 -1 318155..318334 - 59 152990074 - NIS_0325 - hypothetical protein 322 45.12 +1 318350..319825 - 491 152990075 - NIS_0326 - sulfide-quinone reductase 323 44.88 +1 319960..320496 - 178 152990076 - NIS_0327 - hexapaptide repeat-containing transferase 324 42.49 0 320496..322592 - 698 152990077 ppk NIS_0328 - polyphosphate kinase 325 43.24 0 322674..323309 + 211 152990078 - NIS_0329 - carbonate dehydratase 326 45.40 +1 323296..325326 - 676 152990079 uvrB NIS_0330 - excinuclease ABC subunit B 327 36.99 0 325395..325613 + 72 152990080 - NIS_0331 - hypothetical protein 328 34.29 -1 325616..325825 + 69 152990081 - NIS_0332 - hypothetical protein 39.50 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0