version 1.0
Nitratiruptor sp. SB155-2, complete genome - 1..1877931 1843 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1634 41.58 0 1658016..1658573 + 185 152991387 dcd NIS_1646 - deoxycytidine triphosphate deaminase 1635 27.29 -2 1658591..1660891 - 766 152991388 - NIS_1647 - hypothetical protein 1636 41.32 0 1660966..1662681 - 571 152991389 - NIS_1648 - hypothetical protein 1637 37.71 0 1662893..1663828 - 311 152991390 - NIS_1649 - divalent cation transporter 1638 41.51 0 1663828..1664622 - 264 152991391 - NIS_1650 - hypothetical protein 1639 44.07 +1 1664688..1666886 + 732 152991392 topA NIS_1651 - DNA topoisomerase I 1640 42.97 0 1666883..1667380 + 165 152991393 - NIS_1652 - hypothetical protein 1641 46.07 +1 1667377..1668216 + 279 152991394 bioB NIS_1653 - biotin synthase 1642 44.33 +1 1668209..1669372 + 387 152991395 - NIS_1654 - Na+:H+ antiporter 1643 40.29 0 1669341..1669829 - 162 152991396 - NIS_1655 - hypothetical protein 1644 43.33 0 1669826..1670095 - 89 152991397 - NIS_1656 - hypothetical protein 1645 46.52 +1 1670099..1671364 - 421 152991398 eno NIS_1657 - phosphopyruvate hydratase 1646 47.15 +1 1671375..1672409 - 344 152991399 recA NIS_1658 - recombinase A 1647 43.87 +1 1672488..1673351 + 287 152991400 - NIS_1659 - hypothetical protein 1648 37.68 0 1673363..1674397 + 344 152991401 - NIS_1660 - signal transduction response regulator 1649 41.21 0 1674381..1675154 + 257 152991402 - NIS_1661 - UDP-N-acetylenolpyruvoylglucosamine reductase 1650 40.89 0 1675176..1675691 - 171 152991403 tpx NIS_1662 - thiol peroxidase 1651 43.94 +1 1675816..1676805 - 329 152991404 - NIS_1663 - O-sialoglycoprotein endopeptidase 1652 45.52 +1 1676802..1677359 - 185 152991405 - NIS_1664 - hypothetical protein 1653 39.05 0 1677352..1678068 - 238 152991406 - NIS_1665 - hypothetical protein 1654 43.66 +1 1678052..1679116 - 354 152991407 ispC NIS_1666 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1655 43.47 +1 1679113..1679862 - 249 152991408 cdsA NIS_1667 - phosphatidate cytidylyltransferase 1656 39.13 0 1679875..1681185 - 436 152991409 - NIS_1668 - fibronectin/fibrinogen binding protein 1657 47.47 +2 1681239..1682504 + 421 152991410 leuC NIS_1669 - 3-isopropylmalate dehydratase large subunit 1658 42.42 0 1682501..1683193 + 230 152991411 sfsA NIS_1670 - sugar fermentation stimulation protein 1659 40.85 0 1683217..1684467 + 416 152991412 - NIS_1671 - AcrA/AcrE family protein 1660 42.99 0 1684457..1685119 + 220 152991413 - NIS_1672 - peptide ABC transporter ATP-binding protein 1661 40.37 0 1685097..1686290 + 397 152991414 - NIS_1673 - peptide ABC transporter permease 1662 41.54 0 1686287..1687480 + 397 152991415 - NIS_1674 - peptide ABC transporter permease 1663 27.13 -2 1688005..1690068 + 687 152991416 - NIS_1675 - hypothetical protein 1664 26.91 -2 1690222..1692276 + 684 152991417 - NIS_1676 - hypothetical protein 1665 26.84 -2 1692276..1692737 + 153 152991418 - NIS_1677 - hypothetical protein 1666 25.51 -2 1692750..1694513 + 587 152991419 - NIS_1678 - hypothetical protein 1667 30.50 -2 1694487..1694909 - 140 152991420 - NIS_1679 - hypothetical protein 1668 24.74 -2 1694906..1696894 - 662 152991421 - NIS_1680 - hypothetical protein 1669 28.86 -2 1696884..1698203 - 439 152991422 - NIS_1681 - phosphoadenosine phosphosulfate reductase 1670 22.51 -2 1698324..1698554 + 76 152991423 - NIS_1682 - hypothetical protein 1671 28.22 -2 1698809..1699336 - 175 152991424 - NIS_1683 - hypothetical protein 1672 26.39 -2 1699347..1700153 - 268 152991425 - NIS_1684 - hypothetical protein 1673 28.73 -2 1700171..1700539 - 122 152991426 - NIS_1685 - hypothetical protein 1674 24.91 -2 1700559..1700843 - 94 152991427 - NIS_1686 - hypothetical protein 1675 33.62 -1 1700865..1702580 - 571 152991428 - NIS_1687 - hypothetical protein 1676 34.48 -1 1702635..1705520 - 961 152991429 - NIS_1688 - hypothetical protein 1677 26.63 -2 1705517..1706053 - 178 152991430 - NIS_1689 - hypothetical protein 1678 28.75 -2 1706090..1706329 - 79 152991431 - NIS_1690 - hypothetical protein 1679 34.06 -1 1706776..1707873 - 365 152991432 - NIS_1691 - phage integrase family site specific recombinase 1680 31.48 -2 1708467..1708844 - 125 152991433 - NIS_1692 - hypothetical protein 1681 40.17 0 1709433..1710821 + 462 152991434 - NIS_1693 - hypothetical protein 1682 38.10 0 1710833..1711210 + 125 152991435 - NIS_1694 - hypothetical protein 1683 42.33 0 1711223..1711867 + 214 152991436 - NIS_1695 - hypothetical protein 1684 39.44 0 1711890..1713200 + 436 152991437 - NIS_1696 - hypothetical protein 1685 39.61 0 1713202..1714428 + 408 152991438 - NIS_1697 - hypothetical protein 1686 37.61 0 1714425..1714985 + 186 152991439 - NIS_1698 - molybdopterin-guanine dinucleotide biosynthesis protein A 1687 37.75 0 1715073..1715525 - 150 152991440 - NIS_1699 - hypothetical protein 1688 36.14 0 1715547..1715831 + 94 152991441 - NIS_1700 - hypothetical protein 1689 46.33 +1 1715821..1716297 + 158 152991442 - NIS_1701 - molybdenum cofactor biosynthesis protein C 1690 39.91 0 1716294..1716977 - 227 152991443 - NIS_1702 - hypothetical protein 1691 37.93 0 1717392..1720568 - 1058 152991444 - NIS_1703 - type I restriction-modification system, R subunit 1692 29.86 -2 1720558..1721679 - 373 152991445 - NIS_1704 - type I restriction-modification system, S subunit 1693 32.05 -1 1721872..1723113 - 413 152991446 - NIS_1705 - ATP-dependent DNA helicase 1694 31.01 -2 1723117..1724106 - 329 152991447 - NIS_1706 - death-on-curing family protein 1695 40.31 0 1724103..1725635 - 510 152991448 - NIS_1707 - type I restriction-modification system, M subunit 1696 36.20 0 1725635..1726297 - 220 152991449 radC NIS_1708 - DNA repair protein RadC 1697 43.36 0 1726533..1727948 + 471 152991450 deaD NIS_1709 - DEAD-box ATP dependent DNA helicase 1698 40.35 0 1727986..1728897 + 303 152991451 - NIS_1710 - hypothetical protein 1699 38.56 0 1728881..1729339 + 152 152991452 - NIS_1711 - hypothetical protein 1700 41.25 0 1729443..1730213 - 256 152991453 suhB NIS_1712 - inositol-phosphate phosphatase 1701 41.65 0 1730296..1731702 + 468 152991454 - NIS_1713 - serine protease Do 1702 43.74 +1 1731711..1732373 + 220 152991455 - NIS_1714 - two-component response regulator 1703 41.50 0 1732370..1733593 + 407 152991456 - NIS_1715 - two-component sensor histidine kinase 1704 44.36 +1 1734080..1734460 + 126 152991457 - NIS_1716 - hypothetical protein 1705 42.43 0 1734463..1736166 + 567 152991458 - NIS_1717 - potassium uptake protein 1706 43.08 0 1736168..1737019 - 283 152991459 - NIS_1718 - patatin 1707 40.45 0 1737016..1738293 - 425 152991460 - NIS_1719 - hypothetical protein 1708 41.89 0 1738290..1739831 - 513 152991461 - NIS_1720 - major facilitator superfamily multidrug-efflux transporter 1709 41.40 0 1739834..1740949 - 371 152991462 - NIS_1721 - major facilitator superfamily multidrug-efflux transporter 1710 36.61 0 1741053..1741631 + 192 152991463 - NIS_1722 - TetR family transcriptional regulator 1711 43.18 0 1741633..1742790 + 385 152991464 - NIS_1723 - efflux system, membrane fusion protein 1712 44.01 +1 1742798..1743940 + 380 152991465 - NIS_1724 - hypothetical protein 1713 45.19 +1 1743927..1745546 + 539 152991466 - NIS_1725 - multidrug ABC transporter 1714 41.55 0 1745543..1746661 + 372 152991467 - NIS_1726 - multidrug ABC transporter 1715 41.48 0 1746658..1747737 + 359 152991468 - NIS_1727 - multidrug ABC transporter, permease 1716 40.91 0 1747738..1748661 + 307 152991469 - NIS_1728 - hypothetical protein 1717 41.02 0 1748671..1749477 + 268 152991470 - NIS_1729 - hypothetical protein 1718 40.74 0 1749478..1750044 + 188 152991471 - NIS_1730 - DedA family protein 1719 38.10 0 1750202..1751860 + 552 152991472 - NIS_1731 - hypothetical protein 1720 31.41 -2 1751853..1754087 - 744 152991473 - NIS_1732 - hypothetical protein 1721 34.74 -1 1754084..1754938 - 284 152991474 - NIS_1733 - nitrate/sulfonate/bicarbonate ABC transporter, substrate-binding protein 1722 44.38 +1 1755042..1756001 + 319 152991475 - NIS_1734 - thioredoxin reductase 1723 39.76 0 1756002..1756421 - 139 152991476 - NIS_1735 - hypothetical protein 1724 42.20 0 1756412..1756738 - 108 152991477 - NIS_1736 - hypothetical protein 1725 39.85 0 1756739..1757275 - 178 152991478 - NIS_1737 - hypothetical protein 1726 38.45 0 1757276..1757881 - 201 152991479 - NIS_1738 - TetR family transcriptional regulator 1727 39.92 0 1759840..1761159 + 439 152991480 - NIS_1740 - K+ transport system, NAD-binding component 1728 42.61 0 1761141..1762595 + 484 152991481 - NIS_1741 - K+ transport system, membrane component 1729 36.64 0 1762605..1762997 + 130 152991482 - NIS_1742 - hypothetical protein 1730 45.65 +1 1762994..1764373 + 459 152991483 - NIS_1743 - voltage-gated chloride channel 1731 43.12 0 1764370..1765125 - 251 152991484 - NIS_1744 - hypothetical protein 1732 40.23 0 1765118..1766479 - 453 152991485 - NIS_1745 - amino acid transporter 1733 39.53 0 1766544..1767302 + 252 152991486 - NIS_1746 - hypothetical protein 39.50 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0