version 1.0
Nitratiruptor sp. SB155-2, complete genome - 1..1877931 1843 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1597 44.36 +1 1620975..1621364 - 129 152991350 rpsI NIS_1609 - 30S ribosomal protein S9 1598 38.81 0 1621366..1621785 - 139 152991351 rplM NIS_1610 - 50S ribosomal protein L13 1599 35.71 0 1621855..1622358 - 167 152991352 - NIS_1611 - hypothetical protein 1600 37.59 0 1622355..1622942 - 195 152991353 - NIS_1612 - hypothetical protein 1601 44.40 +1 1623068..1624504 - 478 152991354 - NIS_1613 - ferredoxin-like protein 1602 37.55 0 1624506..1624766 - 86 152991355 - NIS_1614 - hypothetical protein 1603 44.68 +1 1624768..1625613 - 281 152991356 ccoP NIS_1615 - cytochrome c oxidase, cbb3-type, subunit III 1604 44.44 +1 1625613..1625819 - 68 152991357 ccoQ NIS_1616 - cytochrome c oxidase, cbb3-type, subunit IV 1605 42.54 0 1625823..1626506 - 227 152991358 ccoO NIS_1617 - cytochrome c oxidase, cbb3-type, subunit II 1606 41.94 0 1626516..1627979 - 487 152991359 ccoN NIS_1618 - cytochrome c oxidase, cbb3-type, subunit I 1607 35.96 0 1628098..1628781 - 227 152991360 - NIS_1619 - two-component response regulator 1608 37.49 0 1628771..1630333 - 520 152991361 - NIS_1620 - two-component sensor histidine kinase 1609 41.72 0 1630354..1632405 - 683 152991362 - NIS_1621 - TonB-dependent copper receptor 1610 29.87 -2 1632558..1632788 - 76 152991363 - NIS_1622 - hypothetical protein 1611 42.81 0 1632788..1633927 - 379 152991364 carA NIS_1623 - carbamoyl phosphate synthase small subunit 1612 41.35 0 1633924..1634484 - 186 152991365 - NIS_1624 - hypothetical protein 1613 44.28 +1 1634494..1635744 - 416 152991366 purA NIS_1625 - adenylosuccinate synthetase 1614 37.81 0 1635744..1636592 - 282 152991367 - NIS_1626 - ATP phosphoribosyltransferase regulatory subunit 1615 44.44 +1 1636594..1637700 - 368 152991368 - NIS_1627 - aminotransferase 1616 37.21 0 1637811..1638248 - 145 152991369 - NIS_1628 - heat shock protein Hsp20 1617 39.60 0 1638304..1640139 - 611 152991370 - NIS_1629 - invasion antigen B 1618 40.99 0 1640136..1640723 - 195 152991371 - NIS_1630 - Ham1 family protein 1619 43.52 +1 1640792..1642126 + 444 152991372 - NIS_1631 - major facilitator superfamily multidrug-efflux transporter 1620 37.84 0 1642156..1642710 - 184 152991373 - NIS_1632 - thioredoxin family protein 1621 43.92 +1 1642721..1643929 - 402 152991374 - NIS_1633 - molybdopterin biosynthesis protein 1622 39.76 0 1643987..1647007 + 1006 152991375 - NIS_1634 - hypothetical protein 1623 47.07 +1 1646993..1647436 - 147 152991376 - NIS_1635 - molybdenum cofactor biosynthesis protein E 1624 42.79 0 1647438..1647659 - 73 152991377 - NIS_1636 - molybdenum cofactor biosynthesis protein D 1625 38.56 0 1647709..1648359 + 216 152991378 - NIS_1637 - hypothetical protein 1626 41.75 0 1648356..1649270 + 304 152991379 - NIS_1638 - cytochrome c peroxidase 1627 36.06 0 1649267..1651318 + 683 152991380 - NIS_1639 - hypothetical protein 1628 43.86 +1 1651324..1652577 - 417 152991381 - NIS_1640 - malate oxidoreductase 1629 43.41 +1 1652574..1653962 - 462 152991382 gltX NIS_1641 - glutamyl-tRNA synthetase 1630 39.64 0 1654051..1654890 + 279 152991383 - NIS_1642 - hypothetical protein 1631 44.67 +1 1654900..1656081 + 393 152991384 - NIS_1643 - tetrahydrodipicolinate N-succinyltransferase 1632 44.57 +1 1656139..1657482 - 447 152991385 accC NIS_1644 - biotin carboxylase 1633 42.54 0 1657483..1657938 - 151 152991386 accB NIS_1645 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 1634 41.58 0 1658016..1658573 + 185 152991387 dcd NIS_1646 - deoxycytidine triphosphate deaminase 1635 27.29 -2 1658591..1660891 - 766 152991388 - NIS_1647 - hypothetical protein 1636 41.32 0 1660966..1662681 - 571 152991389 - NIS_1648 - hypothetical protein 1637 37.71 0 1662893..1663828 - 311 152991390 - NIS_1649 - divalent cation transporter 1638 41.51 0 1663828..1664622 - 264 152991391 - NIS_1650 - hypothetical protein 1639 44.07 +1 1664688..1666886 + 732 152991392 topA NIS_1651 - DNA topoisomerase I 1640 42.97 0 1666883..1667380 + 165 152991393 - NIS_1652 - hypothetical protein 1641 46.07 +1 1667377..1668216 + 279 152991394 bioB NIS_1653 - biotin synthase 1642 44.33 +1 1668209..1669372 + 387 152991395 - NIS_1654 - Na+:H+ antiporter 1643 40.29 0 1669341..1669829 - 162 152991396 - NIS_1655 - hypothetical protein 1644 43.33 0 1669826..1670095 - 89 152991397 - NIS_1656 - hypothetical protein 1645 46.52 +1 1670099..1671364 - 421 152991398 eno NIS_1657 - phosphopyruvate hydratase 1646 47.15 +1 1671375..1672409 - 344 152991399 recA NIS_1658 - recombinase A 1647 43.87 +1 1672488..1673351 + 287 152991400 - NIS_1659 - hypothetical protein 1648 37.68 0 1673363..1674397 + 344 152991401 - NIS_1660 - signal transduction response regulator 1649 41.21 0 1674381..1675154 + 257 152991402 - NIS_1661 - UDP-N-acetylenolpyruvoylglucosamine reductase 1650 40.89 0 1675176..1675691 - 171 152991403 tpx NIS_1662 - thiol peroxidase 1651 43.94 +1 1675816..1676805 - 329 152991404 - NIS_1663 - O-sialoglycoprotein endopeptidase 1652 45.52 +1 1676802..1677359 - 185 152991405 - NIS_1664 - hypothetical protein 1653 39.05 0 1677352..1678068 - 238 152991406 - NIS_1665 - hypothetical protein 1654 43.66 +1 1678052..1679116 - 354 152991407 ispC NIS_1666 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1655 43.47 +1 1679113..1679862 - 249 152991408 cdsA NIS_1667 - phosphatidate cytidylyltransferase 1656 39.13 0 1679875..1681185 - 436 152991409 - NIS_1668 - fibronectin/fibrinogen binding protein 1657 47.47 +2 1681239..1682504 + 421 152991410 leuC NIS_1669 - 3-isopropylmalate dehydratase large subunit 1658 42.42 0 1682501..1683193 + 230 152991411 sfsA NIS_1670 - sugar fermentation stimulation protein 1659 40.85 0 1683217..1684467 + 416 152991412 - NIS_1671 - AcrA/AcrE family protein 1660 42.99 0 1684457..1685119 + 220 152991413 - NIS_1672 - peptide ABC transporter ATP-binding protein 1661 40.37 0 1685097..1686290 + 397 152991414 - NIS_1673 - peptide ABC transporter permease 1662 41.54 0 1686287..1687480 + 397 152991415 - NIS_1674 - peptide ABC transporter permease 1663 27.13 -2 1688005..1690068 + 687 152991416 - NIS_1675 - hypothetical protein 1664 26.91 -2 1690222..1692276 + 684 152991417 - NIS_1676 - hypothetical protein 1665 26.84 -2 1692276..1692737 + 153 152991418 - NIS_1677 - hypothetical protein 1666 25.51 -2 1692750..1694513 + 587 152991419 - NIS_1678 - hypothetical protein 1667 30.50 -2 1694487..1694909 - 140 152991420 - NIS_1679 - hypothetical protein 1668 24.74 -2 1694906..1696894 - 662 152991421 - NIS_1680 - hypothetical protein 1669 28.86 -2 1696884..1698203 - 439 152991422 - NIS_1681 - phosphoadenosine phosphosulfate reductase 1670 22.51 -2 1698324..1698554 + 76 152991423 - NIS_1682 - hypothetical protein 1671 28.22 -2 1698809..1699336 - 175 152991424 - NIS_1683 - hypothetical protein 1672 26.39 -2 1699347..1700153 - 268 152991425 - NIS_1684 - hypothetical protein 1673 28.73 -2 1700171..1700539 - 122 152991426 - NIS_1685 - hypothetical protein 1674 24.91 -2 1700559..1700843 - 94 152991427 - NIS_1686 - hypothetical protein 1675 33.62 -1 1700865..1702580 - 571 152991428 - NIS_1687 - hypothetical protein 1676 34.48 -1 1702635..1705520 - 961 152991429 - NIS_1688 - hypothetical protein 1677 26.63 -2 1705517..1706053 - 178 152991430 - NIS_1689 - hypothetical protein 1678 28.75 -2 1706090..1706329 - 79 152991431 - NIS_1690 - hypothetical protein 1679 34.06 -1 1706776..1707873 - 365 152991432 - NIS_1691 - phage integrase family site specific recombinase 1680 31.48 -2 1708467..1708844 - 125 152991433 - NIS_1692 - hypothetical protein 1681 40.17 0 1709433..1710821 + 462 152991434 - NIS_1693 - hypothetical protein 1682 38.10 0 1710833..1711210 + 125 152991435 - NIS_1694 - hypothetical protein 1683 42.33 0 1711223..1711867 + 214 152991436 - NIS_1695 - hypothetical protein 1684 39.44 0 1711890..1713200 + 436 152991437 - NIS_1696 - hypothetical protein 1685 39.61 0 1713202..1714428 + 408 152991438 - NIS_1697 - hypothetical protein 1686 37.61 0 1714425..1714985 + 186 152991439 - NIS_1698 - molybdopterin-guanine dinucleotide biosynthesis protein A 1687 37.75 0 1715073..1715525 - 150 152991440 - NIS_1699 - hypothetical protein 1688 36.14 0 1715547..1715831 + 94 152991441 - NIS_1700 - hypothetical protein 1689 46.33 +1 1715821..1716297 + 158 152991442 - NIS_1701 - molybdenum cofactor biosynthesis protein C 1690 39.91 0 1716294..1716977 - 227 152991443 - NIS_1702 - hypothetical protein 1691 37.93 0 1717392..1720568 - 1058 152991444 - NIS_1703 - type I restriction-modification system, R subunit 1692 29.86 -2 1720558..1721679 - 373 152991445 - NIS_1704 - type I restriction-modification system, S subunit 1693 32.05 -1 1721872..1723113 - 413 152991446 - NIS_1705 - ATP-dependent DNA helicase 1694 31.01 -2 1723117..1724106 - 329 152991447 - NIS_1706 - death-on-curing family protein 1695 40.31 0 1724103..1725635 - 510 152991448 - NIS_1707 - type I restriction-modification system, M subunit 1696 36.20 0 1725635..1726297 - 220 152991449 radC NIS_1708 - DNA repair protein RadC 39.50 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0