version 1.0
Nitratiruptor sp. SB155-2, complete genome - 1..1877931 1843 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1540 35.10 -1 1568053..1568391 - 112 152991293 - NIS_1551 - hypothetical protein 1541 42.78 0 1568391..1570433 - 680 152991294 fdhF NIS_1552 - formate dehydrogenase, alpha subunit 1542 45.92 +1 1570521..1571783 - 420 152991295 - NIS_1553 - homoserine dehydrogenase 1543 44.88 +1 1571780..1572991 - 403 152991296 - NIS_1554 - aspartate aminotransferase 1544 36.59 0 1573002..1573799 - 265 152991297 - NIS_1555 - hypothetical protein 1545 36.59 0 1573793..1574620 - 275 152991298 - NIS_1556 - hypothetical protein 1546 40.20 0 1574613..1575296 - 227 152991299 - NIS_1557 - RNA methyltransferase 1547 38.73 0 1575321..1576136 - 271 152991300 - NIS_1558 - hypothetical protein 1548 38.31 0 1576136..1576336 - 66 152991301 rpmE NIS_1559 - 50S ribosomal protein L31 1549 35.05 -1 1576604..1577068 + 154 152991302 - NIS_1560 - hypothetical protein 1550 46.46 +1 1577068..1577547 + 159 152991303 - NIS_1561 - fimbrial protein 1551 39.23 0 1577639..1578877 - 412 152991304 - NIS_1562 - general secretory pathway protein F 1552 42.54 0 1578874..1580556 - 560 152991305 - NIS_1563 - general secretory pathway protein E 1553 35.08 -1 1580553..1581410 - 285 152991306 - NIS_1564 - hypothetical protein 1554 40.66 0 1581403..1582194 - 263 152991307 - NIS_1565 - hypothetical protein 1555 38.84 0 1582194..1583681 - 495 152991308 - NIS_1566 - general secretory pathway protein D 1556 37.24 0 1583678..1584010 - 110 152991309 - NIS_1567 - hypothetical protein 1557 37.04 0 1584007..1584627 - 206 152991310 - NIS_1568 - hypothetical protein 1558 39.82 0 1584624..1586087 - 487 152991311 - NIS_1569 - hypothetical protein 1559 45.47 +1 1586556..1587008 - 150 152991312 - NIS_1570 - hypothetical protein 1560 43.19 0 1587005..1587907 - 300 152991313 - NIS_1571 - hypothetical protein 1561 41.86 0 1587907..1588563 - 218 152991314 - NIS_1572 - hypothetical protein 1562 37.74 0 1588560..1592006 - 1148 152991315 - NIS_1573 - hypothetical protein 1563 39.82 0 1592003..1592665 - 220 152991316 - NIS_1574 - hypothetical protein 1564 29.72 -2 1592665..1593051 - 128 152991317 - NIS_1575 - hypothetical protein 1565 33.56 -1 1592996..1593436 - 146 152991318 - NIS_1576 - nucleotidyltransferase 1566 38.65 0 1593433..1593846 - 137 152991319 - NIS_1577 - hypothetical protein 1567 45.73 +1 1593889..1595106 + 405 152991320 - NIS_1578 - molybdopterin biosynthesis protein MoeA 1568 44.95 +1 1595096..1595560 - 154 152991321 - NIS_1579 - hypothetical protein 1569 43.30 0 1595570..1596151 - 193 152991322 - NIS_1580 - 6-pyruvoyl-tetrahydropterin synthase 1570 39.92 0 1596148..1596906 - 252 152991323 - NIS_1581 - hypothetical protein 1571 39.73 0 1596906..1597874 - 322 152991324 moaA NIS_1582 - molybdenum cofactor biosynthesis protein A 1572 41.89 0 1597973..1598884 - 303 152991325 - NIS_1583 - ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit 1573 42.49 0 1598884..1600281 - 465 152991326 - NIS_1584 - ubiquinol cytochrome c oxidoreductase, cytochrome b subunit 1574 45.79 +1 1600291..1600812 - 173 152991327 - NIS_1585 - ubiquinol-cytochrome c oxidoreductase, iron-sulfur subunit 1575 40.05 0 1600889..1601767 - 292 152991328 - NIS_1586 - hypothetical protein 1576 44.68 +1 1601925..1603802 - 625 152991329 gidA NIS_1587 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 1577 43.51 +1 1603911..1604519 + 202 152991330 - NIS_1588 - riboflavin synthase subunit alpha 1578 27.66 -2 1604697..1604978 - 93 152991331 - NIS_1589 - hypothetical protein 1579 37.35 0 1606200..1607171 + 323 152991332 - NIS_1591 - sulfonate/nitrate ABC transporter, substrate-binding protein 1580 40.74 0 1607171..1607953 + 260 152991333 - NIS_1592 - sulfonate/nitrate ABC transporter, permease 1581 38.80 0 1607941..1608672 + 243 152991334 - NIS_1593 - sulfonate/nitrate ABC transporter, ATP-binding protein 1582 39.11 0 1608675..1609904 + 409 152991335 - NIS_1594 - hypothetical protein 1583 35.56 -1 1609914..1610408 + 164 152991336 - NIS_1595 - 2'-5' RNA ligase 1584 42.72 0 1610392..1610700 - 102 152991337 - NIS_1596 - hypothetical protein 1585 42.39 0 1610697..1611281 - 194 152991338 - NIS_1597 - hypothetical protein 1586 34.97 -1 1611271..1613043 - 590 152991339 - NIS_1598 - hypothetical protein 1587 39.00 0 1613027..1613767 - 246 152991340 - NIS_1599 - hypothetical protein 1588 42.09 0 1613768..1614064 - 98 152991341 - NIS_1600 - hypothetical protein 1589 42.93 0 1614065..1614616 - 183 152991342 - NIS_1601 - S-ribosylhomocysteinase 1590 43.24 0 1615049..1616047 - 332 152991343 - NIS_1602 - pyruvate:ferredoxin oxidoreductase, beta subunit 1591 44.75 +1 1616060..1617277 - 405 152991344 - NIS_1603 - pyruvate flavodoxin oxidoreductase subunit alpha 1592 42.59 0 1617288..1617719 - 143 152991345 - NIS_1604 - pyruvate flavodoxin oxidoreductase subunit delta 1593 42.83 0 1617730..1618287 - 185 152991346 - NIS_1605 - pyruvate flavodoxin oxidoreductase subunit gamma 1594 41.09 0 1618436..1619080 - 214 152991347 - NIS_1606 - HAD-superfamily hydrolase 1595 39.53 0 1619077..1620576 - 499 152991348 - NIS_1607 - oligopeptide ABC transporter, substrate-binding protein 1596 38.38 0 1620573..1620929 - 118 152991349 - NIS_1608 - rhodanese family protein 1597 44.36 +1 1620975..1621364 - 129 152991350 rpsI NIS_1609 - 30S ribosomal protein S9 1598 38.81 0 1621366..1621785 - 139 152991351 rplM NIS_1610 - 50S ribosomal protein L13 1599 35.71 0 1621855..1622358 - 167 152991352 - NIS_1611 - hypothetical protein 1600 37.59 0 1622355..1622942 - 195 152991353 - NIS_1612 - hypothetical protein 1601 44.40 +1 1623068..1624504 - 478 152991354 - NIS_1613 - ferredoxin-like protein 1602 37.55 0 1624506..1624766 - 86 152991355 - NIS_1614 - hypothetical protein 1603 44.68 +1 1624768..1625613 - 281 152991356 ccoP NIS_1615 - cytochrome c oxidase, cbb3-type, subunit III 1604 44.44 +1 1625613..1625819 - 68 152991357 ccoQ NIS_1616 - cytochrome c oxidase, cbb3-type, subunit IV 1605 42.54 0 1625823..1626506 - 227 152991358 ccoO NIS_1617 - cytochrome c oxidase, cbb3-type, subunit II 1606 41.94 0 1626516..1627979 - 487 152991359 ccoN NIS_1618 - cytochrome c oxidase, cbb3-type, subunit I 1607 35.96 0 1628098..1628781 - 227 152991360 - NIS_1619 - two-component response regulator 1608 37.49 0 1628771..1630333 - 520 152991361 - NIS_1620 - two-component sensor histidine kinase 1609 41.72 0 1630354..1632405 - 683 152991362 - NIS_1621 - TonB-dependent copper receptor 1610 29.87 -2 1632558..1632788 - 76 152991363 - NIS_1622 - hypothetical protein 1611 42.81 0 1632788..1633927 - 379 152991364 carA NIS_1623 - carbamoyl phosphate synthase small subunit 1612 41.35 0 1633924..1634484 - 186 152991365 - NIS_1624 - hypothetical protein 1613 44.28 +1 1634494..1635744 - 416 152991366 purA NIS_1625 - adenylosuccinate synthetase 1614 37.81 0 1635744..1636592 - 282 152991367 - NIS_1626 - ATP phosphoribosyltransferase regulatory subunit 1615 44.44 +1 1636594..1637700 - 368 152991368 - NIS_1627 - aminotransferase 1616 37.21 0 1637811..1638248 - 145 152991369 - NIS_1628 - heat shock protein Hsp20 1617 39.60 0 1638304..1640139 - 611 152991370 - NIS_1629 - invasion antigen B 1618 40.99 0 1640136..1640723 - 195 152991371 - NIS_1630 - Ham1 family protein 1619 43.52 +1 1640792..1642126 + 444 152991372 - NIS_1631 - major facilitator superfamily multidrug-efflux transporter 1620 37.84 0 1642156..1642710 - 184 152991373 - NIS_1632 - thioredoxin family protein 1621 43.92 +1 1642721..1643929 - 402 152991374 - NIS_1633 - molybdopterin biosynthesis protein 1622 39.76 0 1643987..1647007 + 1006 152991375 - NIS_1634 - hypothetical protein 1623 47.07 +1 1646993..1647436 - 147 152991376 - NIS_1635 - molybdenum cofactor biosynthesis protein E 1624 42.79 0 1647438..1647659 - 73 152991377 - NIS_1636 - molybdenum cofactor biosynthesis protein D 1625 38.56 0 1647709..1648359 + 216 152991378 - NIS_1637 - hypothetical protein 1626 41.75 0 1648356..1649270 + 304 152991379 - NIS_1638 - cytochrome c peroxidase 1627 36.06 0 1649267..1651318 + 683 152991380 - NIS_1639 - hypothetical protein 1628 43.86 +1 1651324..1652577 - 417 152991381 - NIS_1640 - malate oxidoreductase 1629 43.41 +1 1652574..1653962 - 462 152991382 gltX NIS_1641 - glutamyl-tRNA synthetase 1630 39.64 0 1654051..1654890 + 279 152991383 - NIS_1642 - hypothetical protein 1631 44.67 +1 1654900..1656081 + 393 152991384 - NIS_1643 - tetrahydrodipicolinate N-succinyltransferase 1632 44.57 +1 1656139..1657482 - 447 152991385 accC NIS_1644 - biotin carboxylase 1633 42.54 0 1657483..1657938 - 151 152991386 accB NIS_1645 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 1634 41.58 0 1658016..1658573 + 185 152991387 dcd NIS_1646 - deoxycytidine triphosphate deaminase 1635 27.29 -2 1658591..1660891 - 766 152991388 - NIS_1647 - hypothetical protein 1636 41.32 0 1660966..1662681 - 571 152991389 - NIS_1648 - hypothetical protein 1637 37.71 0 1662893..1663828 - 311 152991390 - NIS_1649 - divalent cation transporter 1638 41.51 0 1663828..1664622 - 264 152991391 - NIS_1650 - hypothetical protein 1639 44.07 +1 1664688..1666886 + 732 152991392 topA NIS_1651 - DNA topoisomerase I 39.50 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0