version 1.0
Nitratiruptor sp. SB155-2, complete genome - 1..1877931 1843 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1119 31.20 -2 1147438..1149267 - 609 152990872 - NIS_1128 - signal transduction response regulator 1120 37.50 0 1149264..1149983 - 239 152990873 - NIS_1129 - methyltransferase 1121 39.97 0 1149970..1151988 - 672 152990874 - NIS_1130 - hypothetical protein 1122 40.40 0 1151979..1152770 - 263 152990875 ribF NIS_1131 - bifunctional riboflavin kinase/FMN adenylyltransferase 1123 41.70 0 1152775..1153479 - 234 152990876 - NIS_1132 - hemolysin A 1124 43.17 0 1153469..1155451 - 660 152990877 ligA NIS_1133 - NAD-dependent DNA ligase LigA 1125 35.13 -1 1155444..1157498 - 684 152990878 - NIS_1134 - hypothetical protein 1126 37.80 0 1157491..1158363 - 290 152990879 - NIS_1135 - cytochrome c peroxidase 1127 38.49 0 1158403..1159566 - 387 152990880 - NIS_1136 - hypothetical protein 1128 41.16 0 1159563..1160699 - 378 152990881 - NIS_1137 - dihydropteroate synthase 1129 36.30 0 1160696..1161301 - 201 152990882 - NIS_1138 - DNA polymerase III, delta' subunit 1130 40.50 0 1161298..1161855 - 185 152990883 - NIS_1139 - hypothetical protein 1131 45.33 +1 1161852..1163060 - 402 152990884 - NIS_1140 - aspartate kinase 1132 38.68 0 1163057..1163524 - 155 152990885 - NIS_1141 - dinucleoside polyphosphate hydrolase 1133 39.69 0 1163612..1164649 + 345 152990886 - NIS_1142 - coproporphyrinogen III oxidase 1134 37.06 0 1164632..1165624 - 330 152990887 - NIS_1143 - hypothetical protein 1135 40.74 0 1165720..1166097 + 125 152990888 - NIS_1144 - twin-arginine translocation system component TatB 1136 42.65 0 1166090..1166830 + 246 152990889 tatC NIS_1145 - twin-arginine translocation system component TatC 1137 42.91 0 1166830..1167852 + 340 152990890 queA NIS_1146 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1138 40.88 0 1167908..1168384 + 158 152990891 - NIS_1147 - phosphohistidine phosphatase 1139 40.68 0 1168553..1169341 + 262 152990892 xthA NIS_1148 - exodeoxyribonuclease III 1140 40.20 0 1169322..1170617 + 431 152990893 - NIS_1149 - voltage-gated chloride channel 1141 38.10 0 1170611..1171051 - 146 152990894 - NIS_1150 - peroxide stress regulator 1142 42.25 0 1171193..1171708 + 171 152990895 - NIS_1151 - bacterioferritin 1143 39.95 0 1171705..1172565 + 286 152990896 - NIS_1152 - thiosulfate sulfurtransferase 1144 39.25 0 1172569..1173075 + 168 152990897 - NIS_1153 - hypothetical protein 1145 39.11 0 1173082..1174623 - 513 152990898 - NIS_1154 - ABC transporter 1146 40.82 0 1174613..1174879 - 88 152990899 - NIS_1155 - hypothetical protein 1147 46.79 +1 1174910..1176001 - 363 152990900 - NIS_1156 - peptidase S1, chymotrypsin 1148 36.41 0 1175998..1176354 - 118 152990901 - NIS_1157 - hypothetical protein 1149 45.14 +1 1176354..1177073 - 239 152990902 - NIS_1158 - DNA processing protein A 1150 41.87 0 1177066..1178400 - 444 152990903 - NIS_1159 - sodium:sulphate symporter 1151 39.60 0 1178410..1179414 - 334 152990904 - NIS_1160 - hypothetical protein 1152 43.01 0 1179440..1180462 - 340 152990905 ilvC NIS_1161 - ketol-acid reductoisomerase 1153 40.84 0 1180626..1182557 + 643 152990906 - NIS_1162 - ribonuclease 1154 36.25 0 1182550..1183509 + 319 152990907 - NIS_1163 - DNA polymerase III subunit delta 1155 38.24 0 1183587..1183973 + 128 152990908 rpsF NIS_1164 - 30S ribosomal protein S6 1156 46.14 +1 1183966..1184418 + 150 152990909 ssb NIS_1165 - single-strand DNA binding protein 1157 34.78 -1 1184432..1184707 + 91 152990910 rpsR NIS_1166 - 30S ribosomal protein S18 1158 35.18 -1 1184729..1186567 - 612 152990911 - NIS_1167 - hypothetical protein 1159 38.47 0 1186567..1187247 - 226 152990912 - NIS_1168 - hypothetical protein 1160 39.16 0 1187237..1187854 - 205 152990913 hisG NIS_1169 - ATP phosphoribosyltransferase catalytic subunit 1161 39.08 0 1187848..1188456 - 202 152990914 - NIS_1170 - pantothenate kinase 1162 39.45 0 1188443..1188769 - 108 152990915 - NIS_1171 - hypothetical protein 1163 38.31 0 1188766..1189770 - 334 152990916 - NIS_1172 - hypothetical protein 1164 36.65 0 1189767..1190369 - 200 152990917 - NIS_1173 - hypothetical protein 1165 37.50 0 1190428..1190763 + 111 152990918 - NIS_1174 - glutamyl-tRNA amidotransferase subunit C 1166 44.88 +1 1190772..1191836 + 354 152990919 - NIS_1175 - twitching motility protein PilT 1167 39.29 0 1191849..1192469 + 206 152990920 - NIS_1176 - colicin V production protein 1168 41.62 0 1192472..1193980 + 502 152990921 - NIS_1177 - lysyl-tRNA synthetase 1169 44.07 +1 1193984..1195231 + 415 152990922 glyA NIS_1178 - serine hydroxymethyltransferase 1170 36.61 0 1195312..1196043 + 243 152990923 - NIS_1179 - hypothetical protein 1171 41.22 0 1196043..1197449 + 468 152990924 trpE NIS_1180 - anthranilate synthase component I 1172 40.38 0 1197446..1198240 + 264 152990925 aroE NIS_1181 - shikimate 5-dehydrogenase 1173 35.73 0 1198229..1199605 - 458 152990926 - NIS_1182 - hypothetical protein 1174 41.32 0 1199995..1200357 - 120 152990927 - NIS_1183 - hypothetical protein 1175 43.26 0 1200354..1201703 - 449 152990928 - NIS_1184 - 3-deoxy-7-phosphoheptulonate synthase, class II 1176 43.11 0 1201753..1202325 - 190 152990929 recR NIS_1185 - recombination protein RecR 1177 41.71 0 1202430..1203551 + 373 152990930 dnaJ NIS_1186 - co-chaperone protein DnaJ 1178 40.93 0 1203569..1206703 - 1044 152990931 - NIS_1187 - CcmF/CcyK/CcsA family cytochrome c biogenesis protein 1179 40.34 0 1206791..1209457 - 888 152990932 polA NIS_1188 - DNA polymerase I 1180 35.17 -1 1209508..1209834 + 108 152990933 - NIS_1189 - hypothetical protein 1181 40.72 0 1210024..1210632 - 202 152990934 - NIS_1190 - hypothetical protein 1182 44.11 +1 1210622..1213441 - 939 152990935 uvrA NIS_1191 - excinuclease ABC subunit A 1183 39.51 0 1213451..1214179 - 242 152990936 - NIS_1192 - hypothetical protein 1184 37.80 0 1214282..1215064 + 260 152990937 - NIS_1193 - hypothetical protein 1185 43.04 0 1215061..1215987 - 308 152990938 - NIS_1194 - tRNA-dihydrouridine synthase 1186 39.50 0 1215988..1216992 - 334 152990939 - NIS_1195 - hypothetical protein 1187 38.96 0 1217006..1217467 - 153 152990940 - NIS_1196 - hypothetical protein 1188 42.17 0 1217460..1218059 - 199 152990941 - NIS_1197 - thiamine-phosphate pyrophosphorylase 1189 45.80 +1 1218046..1218903 - 285 152990942 accD NIS_1198 - acetyl-CoA carboxylase subunit beta 1190 41.63 0 1218903..1219625 - 240 152990943 - NIS_1199 - inositol monophosphatase family protein 1191 44.20 +1 1219625..1221004 - 459 152990944 gltD NIS_1200 - glutamate synthase subunit beta 1192 44.34 +1 1221006..1225430 - 1474 152990945 gltB NIS_1201 - glutamate synthase (NADPH), large chain 1193 39.84 0 1225536..1226150 + 204 152990946 - NIS_1202 - hypothetical protein 1194 28.82 -2 1226154..1227506 - 450 152990947 - NIS_1203 - hypothetical protein 1195 35.83 0 1227506..1229386 - 626 152990948 - NIS_1204 - methyl-accepting chemotaxis protein 1196 29.12 -2 1229405..1230757 - 450 152990949 - NIS_1205 - hypothetical protein 1197 42.25 0 1231253..1231936 - 227 152990950 - NIS_1206 - hypothetical protein 1198 40.97 0 1232187..1233614 - 475 152990951 - NIS_1207 - hypothetical protein 1199 43.44 +1 1233616..1234377 - 253 152990952 - NIS_1208 - hypothetical protein 1200 43.68 +1 1234374..1235117 - 247 152990953 pfs NIS_1209 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1201 42.33 0 1235181..1235780 - 199 152990954 - NIS_1210 - hypothetical protein 1202 45.16 +1 1235891..1236820 - 309 152990955 fabD NIS_1211 - malonyl CoA-acyl carrier protein transacylase 1203 40.83 0 1236898..1237404 - 168 152990956 slyD NIS_1212 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 1204 37.60 0 1237486..1238328 - 280 152990957 - NIS_1213 - hypothetical protein 1205 42.26 0 1238338..1238886 - 182 152990958 - NIS_1214 - peptidoglycan-associated lipoprotein 1206 39.95 0 1238953..1240176 - 407 152990959 - NIS_1215 - translocation protein TolB 1207 37.89 0 1240221..1240922 - 233 152990960 - NIS_1216 - hypothetical protein 1208 38.21 0 1240915..1241304 - 129 152990961 - NIS_1217 - biopolymer ExbD/TolR family transporter 1209 39.22 0 1241304..1241864 - 186 152990962 - NIS_1218 - biopolymer ExbB/TolQ family transporter 1210 43.08 0 1241866..1242255 - 129 152990963 atpC NIS_1219 - F0F1 ATP synthase subunit epsilon 1211 43.19 0 1242285..1243694 - 469 152990964 atpD NIS_1220 - F0F1 ATP synthase subunit beta 1212 40.56 0 1243710..1244594 - 294 152990965 atpG NIS_1221 - F0F1 ATP synthase subunit gamma 1213 45.39 +1 1244604..1246121 - 505 152990966 atpA NIS_1222 - F0F1 ATP synthase subunit alpha 1214 40.11 0 1246134..1246664 - 176 152990967 atpH NIS_1223 - F0F1 ATP synthase subunit delta 1215 41.81 0 1246664..1247182 - 172 152990968 - NIS_1224 - F0F1 ATP synthase subunit B 1216 42.32 0 1247195..1247617 - 140 152990969 - NIS_1225 - F0F1-type ATP synthase, B' subunit 1217 41.37 0 1247688..1248533 - 281 152990970 - NIS_1226 - chromosome partitioning protein ParB 1218 42.93 0 1248520..1249311 - 263 152990971 - NIS_1227 - chromosome partitioning protein, ATPase ParA 39.50 MEAN 3.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0