version 1.0
Nitrosopumilus maritimus SCM1, complete genome - 1..1645259 1795 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 33 41.38 +2 27032..27292 + 86 161527545 - Nmar_0033 - hypothetical protein 34 36.51 0 27296..28303 + 335 161527546 - Nmar_0034 - hypothetical protein 35 35.61 0 28300..28650 + 116 161527547 - Nmar_0035 - hypothetical protein 36 39.49 +1 28710..28904 + 64 161527548 - Nmar_0036 - hypothetical protein 37 33.75 0 28946..29659 + 237 161527549 - Nmar_0037 - radical SAM domain-containing protein 38 38.17 +1 29723..30280 + 185 161527550 - Nmar_0038 - GTP cyclohydrolase I 39 34.59 0 30258..30575 + 105 161527551 - Nmar_0039 - hypothetical protein 40 34.81 0 30578..31252 - 224 161527552 - Nmar_0040 - ExsB family protein 41 36.90 0 31256..32179 - 307 161527553 - Nmar_0041 - homoserine kinase 42 36.36 0 32179..32937 - 252 161527554 - Nmar_0042 - GTPase 43 35.99 0 33030..34121 + 363 161527555 - Nmar_0043 - hypothetical protein 44 33.96 0 34156..34950 + 264 161527556 - Nmar_0044 - short-chain dehydrogenase/reductase SDR 45 31.11 0 34958..35362 - 134 161527557 - Nmar_0045 - hypothetical protein 46 34.62 0 35374..35685 - 103 161527558 - Nmar_0046 - hypothetical protein 47 33.74 0 35839..37074 - 411 161527559 - Nmar_0047 - hypothetical protein 48 30.84 0 37114..38277 - 387 161527560 - Nmar_0048 - thiamine biosynthesis ATP pyrophosphatase-like protein 49 35.95 0 38305..39030 + 241 161527561 - Nmar_0049 - adenylylsulfate reductase, thioredoxin dependent 50 35.43 0 39032..40174 + 380 161527562 - Nmar_0050 - sulfate adenylyltransferase 51 39.04 +1 40206..40871 + 221 161527563 - Nmar_0051 - hypothetical protein 52 33.03 0 40855..41511 - 218 161527564 - Nmar_0052 - DNA-(apurinic or apyrimidinic site) lyase 53 34.98 0 41561..42715 + 384 161527565 - Nmar_0053 - hypothetical protein 54 34.11 0 42712..43098 + 128 161527566 - Nmar_0054 - hypothetical protein 55 32.62 0 43073..45031 - 652 161527567 - Nmar_0055 - hypothetical protein 56 36.06 0 45126..45602 + 158 161527568 - Nmar_0056 - hypothetical protein 57 34.52 0 45627..46217 + 196 161527569 - Nmar_0057 - precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 58 33.20 0 46253..46975 + 240 161527570 - Nmar_0058 - precorrin-2 C20-methyltransferase 59 32.04 0 46968..47738 + 256 161527571 - Nmar_0059 - precorrin-4 C11-methyltransferase 60 26.72 -2 47719..48474 - 251 161527572 - Nmar_0060 - glutamate racemase 61 43.16 +2 48580..49230 + 216 161527573 - Nmar_0061 - hypothetical protein 62 29.97 -1 49278..50438 - 386 161527574 - Nmar_0062 - glycosyl transferase family protein 63 33.61 0 50600..52057 - 485 161527575 - Nmar_0063 - glycyl-tRNA synthetase 64 31.90 0 52088..52927 - 279 161527576 - Nmar_0064 - apurinic endonuclease Apn1 65 33.72 0 53013..54038 + 341 161527577 - Nmar_0065 - DNA primase, large subunit 66 28.79 -1 54038..55159 + 373 161527578 - Nmar_0066 - DNA primase small subunit 67 35.01 0 55201..58062 + 953 161527579 - Nmar_0067 - hypothetical protein 68 26.70 -2 58063..58605 + 180 161527580 - Nmar_0068 - glutamine amidotransferase class-I 69 30.22 -1 58640..59602 + 320 161527581 - Nmar_0069 - TPR repeat-containing protein 70 34.48 0 59729..59902 + 57 161527582 - Nmar_0070 - hypothetical protein 71 35.51 0 60101..60514 + 137 161527583 - Nmar_0071 - ribosomal protein S6e 72 35.31 0 60546..61808 + 420 161527584 - Nmar_0072 - translation initiation factor IF-2 subunit gamma 73 24.12 -2 61801..62169 + 122 161527585 - Nmar_0073 - hypothetical protein 74 33.78 0 62205..62654 + 149 161527586 - Nmar_0074 - PEBP family protein 75 31.74 0 62723..64861 + 712 161527587 - Nmar_0075 - dolichyl-diphosphooligosaccharide--protein glycotransferase 76 27.56 -1 64864..65019 - 51 161527588 - Nmar_0076 - RNA-binding protein Nop10p 77 29.32 -1 65021..65818 - 265 161527589 - Nmar_0077 - RNA-binding S1 domain-containing protein 78 31.83 0 65859..66389 - 176 161527590 - Nmar_0078 - cob(I)alamin adenosyltransferase 79 29.05 -1 66477..67829 + 450 161527591 - Nmar_0079 - cobyrinic acid a,c-diamide synthase 80 35.51 0 67818..68459 - 213 161527592 - Nmar_0080 - precorrin-8X methylmutase CbiC/CobH 81 30.15 -1 68449..69201 - 250 161527593 - Nmar_0081 - cobalamin (vitamin B12) biosynthesis CbiX protein 82 31.81 0 69198..70250 - 350 161527594 - Nmar_0082 - cobalamin (vitamin B12) biosynthesis CbiG protein 83 33.98 0 70282..71367 - 361 161527595 - Nmar_0083 - cobalamin biosynthesis protein CbiD 84 27.82 -1 71458..72327 + 289 161527596 - Nmar_0084 - NAD-dependent epimerase/dehydratase 85 34.88 0 72304..73470 - 388 161527597 - Nmar_0085 - methionine adenosyltransferase 86 32.11 0 73486..73731 - 81 161527598 - Nmar_0086 - like-Sm ribonucleoprotein core 87 25.84 -2 73840..74493 + 217 161527599 - Nmar_0087 - RecA/RadA recombinase-like protein 88 31.77 0 74592..77333 + 913 161527600 - Nmar_0088 - DEAD/DEAH box helicase domain-containing protein 89 32.98 0 77330..78730 - 466 161527601 - Nmar_0089 - nucleic acid binding OB-fold tRNA/helicase-type 90 32.06 0 78944..79882 + 312 161527602 - Nmar_0090 - ABC transporter related 91 32.28 0 79866..80627 + 253 161527603 - Nmar_0091 - ABC-2 type transporter 92 30.09 -1 80633..81373 - 246 161527604 - Nmar_0092 - UDP-glucose/GDP-mannose dehydrogenase 93 28.49 -1 81548..82600 - 350 161527605 - Nmar_0093 - hypothetical protein 94 31.84 0 82664..83803 + 379 161527606 - Nmar_0094 - hypothetical protein 95 27.84 -1 83839..84402 + 187 161527607 - Nmar_0095 - GrpE protein 96 36.37 0 84405..86315 + 636 161527608 - Nmar_0096 - chaperone protein DnaK 97 35.73 0 86365..87450 + 361 161527609 - Nmar_0097 - chaperone protein DnaJ 98 29.03 -1 87456..87989 + 177 161527610 - Nmar_0098 - hypothetical protein 99 29.82 -1 88308..90212 - 634 161527611 - Nmar_0099 - glutamyl-tRNA(Gln) amidotransferase subunit E 100 32.71 0 90221..91510 - 429 161527612 - Nmar_0100 - glutamyl-tRNA(Gln) amidotransferase subunit D 101 36.38 0 91543..93711 - 722 161527613 - Nmar_0101 - AAA family ATPase, CDC48 subfamily protein 102 40.27 +1 93816..94550 + 244 161527614 - Nmar_0102 - 50S ribosomal protein L2P 103 34.77 0 94601..94879 + 92 161527615 - Nmar_0103 - acylphosphatase 104 27.03 -2 94876..95208 - 110 161527616 - Nmar_0104 - hypothetical protein 105 31.37 0 95588..96502 - 304 161527617 - Nmar_0105 - PP-loop domain-containing protein 106 24.86 -2 96623..97543 + 306 161527618 - Nmar_0106 - methyltransferase type 12 107 33.33 0 97656..98852 - 398 161527619 - Nmar_0107 - peptidase M50 108 24.68 -2 98896..99207 + 103 161527620 - Nmar_0108 - CutA1 divalent ion tolerance protein 109 29.90 -1 99204..100253 - 349 161527621 - Nmar_0109 - eRF1 domain-containing 1 protein 110 32.13 0 100286..100699 - 137 161527622 - Nmar_0110 - hypothetical protein 111 31.57 0 100838..101290 + 150 161527623 - Nmar_0111 - hypothetical protein 112 38.18 +1 101295..101459 - 54 161527624 - Nmar_0112 - hypothetical protein 113 36.42 0 101499..101951 - 150 161527625 - Nmar_0113 - DtxR family iron dependent repressor 114 32.55 0 101953..102720 - 255 161527626 - Nmar_0114 - transcriptional regulator, TrmB 115 35.36 0 102822..104501 + 559 161527627 - Nmar_0115 - radical SAM domain-containing protein 116 29.73 -1 104553..105578 + 341 161527628 - Nmar_0116 - glycosyl transferase group 1 117 28.77 -1 105630..106637 + 335 161527629 - Nmar_0117 - polysaccharide biosynthesis protein CapD 118 23.66 -2 106639..108219 - 526 161527630 - Nmar_0118 - hypothetical protein 119 29.90 -1 108318..109481 - 387 161527631 - Nmar_0119 - polysaccharide biosynthesis protein 120 27.58 -1 109495..110676 - 393 161527632 - Nmar_0120 - glycosyl transferase group 1 121 22.18 -2 110737..111624 - 295 161527633 - Nmar_0121 - NAD-dependent epimerase/dehydratase 122 27.51 -1 111720..112664 + 314 161527634 - Nmar_0122 - NAD-dependent epimerase/dehydratase 123 24.98 -2 112659..113699 - 346 161527635 - Nmar_0123 - glycosyl transferase family protein 124 27.37 -2 113741..114796 - 351 161527636 - Nmar_0124 - glucose-1-phosphate thymidyltransferase 125 26.36 -2 114842..115831 - 329 161527637 - Nmar_0125 - dTDP-glucose 4,6-dehydratase 126 29.19 -1 116426..117607 - 393 161527638 - Nmar_0126 - GDSL family lipase 127 33.98 0 117608..119311 - 567 161527639 - Nmar_0127 - carbamoyltransferase 128 26.44 -2 119311..119658 - 115 161527640 - Nmar_0128 - hypothetical protein 129 24.84 -2 119660..119812 - 50 161527641 - Nmar_0129 - hypothetical protein 130 29.59 -1 119962..120735 - 257 161527642 - Nmar_0130 - hypothetical protein 131 31.25 0 120842..121897 + 351 161527643 - Nmar_0131 - N-acylneuraminate-9-phosphate synthase 132 28.47 -1 121900..122988 - 362 161527644 - Nmar_0132 - glutamine--scyllo-inositol transaminase 34.31 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.