version 1.0
Nitrosopumilus maritimus SCM1, complete genome - 1..1645259 1795 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 541 32.75 0 484663..485514 - 283 161528053 - Nmar_0545 - prephenate dehydrogenase 542 32.17 0 485511..486881 - 456 161528054 - Nmar_0546 - aminotransferase class I and II 543 35.79 0 486886..487983 - 365 161528055 - Nmar_0547 - chorismate synthase 544 33.96 0 488310..489578 - 422 161528056 - Nmar_0548 - 3-phosphoshikimate 1-carboxyvinyltransferase 545 34.27 0 489568..490422 - 284 161528057 - Nmar_0549 - shikimate kinase 546 33.58 0 490422..491243 - 273 161528058 - Nmar_0550 - shikimate 5-dehydrogenase 547 30.80 -1 491292..491963 - 223 161528059 - Nmar_0551 - 3-dehydroquinate dehydratase, type I 548 34.56 0 491965..493026 - 353 161528060 - Nmar_0552 - 3-dehydroquinate synthase 549 37.04 0 493019..493801 - 260 161528061 - Nmar_0553 - phospho-2-dehydro-3-deoxyheptonate aldolase 550 35.30 0 493936..495054 + 372 161528062 - Nmar_0554 - radical SAM domain-containing protein 551 36.66 0 495049..496491 - 480 161528063 - Nmar_0555 - UbiD family decarboxylase 552 36.60 0 496619..499099 + 826 161528064 - Nmar_0556 - histidine kinase 553 40.36 +1 499165..499548 - 127 161528065 - Nmar_0557 - hypothetical protein 554 42.21 +2 499587..500318 + 243 161528066 - Nmar_0558 - hypothetical protein 555 41.67 +2 500703..501698 + 331 161528067 - Nmar_0559 - trans-sialidase 556 32.69 0 501721..502185 - 154 161528068 - Nmar_0560 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 557 40.62 +1 502286..502999 + 237 161528069 - Nmar_0561 - major intrinsic protein 558 29.58 -1 503038..503463 + 141 161528070 - Nmar_0562 - hypothetical protein 559 34.80 0 503460..504278 + 272 161528071 - Nmar_0563 - hypothetical protein 560 35.27 0 504393..504806 - 137 161528072 - Nmar_0564 - acyl-CoA hydrolase 561 30.66 -1 504947..505693 + 248 161528073 - Nmar_0565 - methyltransferase type 12 562 36.04 0 505750..506082 + 110 161528074 - Nmar_0566 - hypothetical protein 563 33.33 0 506210..506860 + 216 161528075 - Nmar_0567 - hypothetical protein 564 35.57 0 506914..507315 + 133 161528076 - Nmar_0568 - signal-transduction protein 565 30.75 -1 507316..507741 - 141 161528077 - Nmar_0569 - hypothetical protein 566 32.79 0 507793..508344 + 183 161528078 - Nmar_0570 - DNA-3-methyladenine glycosylase I 567 35.22 0 508373..508744 + 123 161528079 - Nmar_0571 - hypothetical protein 568 34.68 0 508749..510014 + 421 161528080 - Nmar_0572 - hypothetical protein 569 36.24 0 510081..510596 + 171 161528081 - Nmar_0573 - Ferritin Dps family protein 570 36.78 0 510959..511132 - 57 161528082 - Nmar_0574 - hypothetical protein 571 27.06 -2 511164..511466 - 100 161528083 - Nmar_0575 - hypothetical protein 572 32.89 0 511861..512307 + 148 161528084 - Nmar_0576 - pyridoxamine 5'-phosphate oxidase-related FMN-binding 573 28.69 -1 512302..513054 - 250 161528085 - Nmar_0577 - hypothetical protein 574 33.90 0 513299..514888 - 529 161528086 - Nmar_0578 - lysyl-tRNA synthetase 575 34.22 0 514892..516475 - 527 161528087 - Nmar_0579 - ELP3 family histone acetyltransferase 576 33.33 0 516532..516840 - 102 161528088 - Nmar_0580 - hypothetical protein 577 38.53 +1 516887..518137 - 416 161528089 - Nmar_0581 - sodium/hydrogen exchanger 578 35.19 0 518212..519234 - 340 161528090 - Nmar_0582 - phosphoribosylformylglycinamidine cyclo-ligase 579 37.47 0 519284..520009 - 241 161528091 - Nmar_0583 - hypothetical protein 580 32.07 0 520425..522080 + 551 161528092 - Nmar_0584 - hypothetical protein 581 33.33 0 522090..522437 - 115 161528093 - Nmar_0585 - hypothetical protein 582 33.99 0 522625..523080 + 151 161528094 - Nmar_0586 - nitrogen regulatory protein P-II 583 38.44 +1 523440..523772 - 110 161528095 - Nmar_0587 - nitrogen regulatory protein P-II 584 40.21 +1 523890..525197 + 435 161528096 - Nmar_0588 - ammonium transporter 585 33.06 0 525213..525581 + 122 161528097 - Nmar_0589 - hypothetical protein 586 36.25 0 525903..526793 + 296 161528098 - Nmar_0590 - CaCA family Na(+)/Ca(+) antiporter 587 31.71 0 526808..528166 - 452 161528099 - Nmar_0591 - peptidase U62 modulator of DNA gyrase 588 36.11 0 528167..529426 - 419 161528100 - Nmar_0592 - radical SAM domain-containing protein 589 31.97 0 529423..530595 - 390 161528101 - Nmar_0593 - radical SAM domain-containing protein 590 37.63 0 530634..531773 - 379 161528102 - Nmar_0594 - 2-alkenal reductase 591 33.09 0 531812..533020 - 402 161528103 - Nmar_0595 - glycosyl transferase family protein 592 34.29 0 533024..533440 - 138 161528104 - Nmar_0596 - cyclase/dehydrase 593 33.09 0 533768..534178 + 136 161528105 - Nmar_0597 - tRNA-binding domain-containing protein 594 34.58 0 534324..534884 - 186 161528106 - Nmar_0598 - 2-alkenal reductase 595 32.53 0 535023..536144 + 373 161528107 - Nmar_0599 - hypothetical protein 596 28.89 -1 536144..536323 + 59 161528108 - Nmar_0600 - hypothetical protein 597 35.68 0 536325..537218 - 297 161528109 - Nmar_0601 - methionine aminopeptidase 598 34.96 0 537506..537751 + 81 161528110 - Nmar_0602 - hypothetical protein 599 32.39 0 537875..539041 + 388 161528111 - Nmar_0603 - hypothetical protein 600 33.81 0 539483..540115 + 210 161528112 - Nmar_0604 - hypothetical protein 601 28.19 -1 540147..541508 - 453 161528113 - Nmar_0605 - restriction modification system DNA specificity subunit 602 34.10 0 541510..543081 - 523 161528114 - Nmar_0606 - type I restriction-modification system, M subunit 603 30.22 -1 543154..544470 + 438 161528115 - Nmar_0607 - restriction modification system DNA specificity subunit 604 35.58 0 544537..547557 + 1006 161528116 - Nmar_0608 - HsdR family type I site-specific deoxyribonuclease 605 33.89 0 547547..548086 + 179 161528117 - Nmar_0609 - hypothetical protein 606 30.37 -1 548173..550365 + 730 161528118 - Nmar_0610 - restriction modification system DNA specificity subunit 607 31.94 0 550362..550865 + 167 161528119 - Nmar_0611 - hypothetical protein 608 29.49 -1 550928..551785 + 285 161528120 - Nmar_0612 - hypothetical protein 609 32.27 0 551790..552731 - 313 161528121 - Nmar_0613 - integrase family protein 610 31.86 0 552946..553557 + 203 161528122 - Nmar_0614 - hypothetical protein 611 31.97 0 553550..554134 + 194 161528123 - Nmar_0615 - hypothetical protein 612 34.85 0 554316..557606 + 1096 161528124 - Nmar_0616 - hypothetical protein 613 29.07 -1 557641..558132 + 163 161528125 - Nmar_0617 - hypothetical protein 614 32.85 0 558117..560579 - 820 161528126 - Nmar_0618 - solute binding protein-like protein 615 30.43 -1 560659..561312 + 217 161528127 - Nmar_0619 - hypothetical protein 616 35.51 0 561296..563041 - 581 161528128 - Nmar_0620 - membrane protein-like protein 617 37.88 +1 563248..563577 - 109 161528129 - Nmar_0621 - hypothetical protein 618 37.54 0 563679..563987 + 102 161528130 - Nmar_0622 - translation initiation factor SUI1 619 32.53 0 563994..564983 + 329 161528131 - Nmar_0623 - abortive infection protein 620 36.96 0 564972..565880 - 302 161528132 - Nmar_0624 - transcription factor TFIIB cyclin-related 621 31.77 0 565999..566637 - 212 161528133 - Nmar_0625 - hypothetical protein 622 35.21 0 566639..567598 - 319 161528134 - Nmar_0626 - LPPG:FO 2-phospho-L-lactate transferase 623 39.43 +1 567675..569051 + 458 161528135 - Nmar_0627 - hypothetical protein 624 32.00 0 569083..569382 + 99 161528136 - Nmar_0628 - hypothetical protein 625 32.05 0 569705..570328 - 207 161528137 - Nmar_0629 - methyltransferase type 11 626 31.79 0 570769..573681 + 970 161528138 - Nmar_0630 - hypothetical protein 627 34.49 0 573682..574890 - 402 161528139 - Nmar_0631 - geranylgeranyl reductase 628 38.10 +1 574939..575148 - 69 161528140 - Nmar_0632 - hypothetical protein 629 31.79 0 575347..575928 + 193 161528141 - Nmar_0633 - hypothetical protein 630 36.75 0 575917..576678 - 253 161528142 - Nmar_0634 - short-chain dehydrogenase/reductase SDR 631 31.63 0 576732..577610 - 292 161528143 - Nmar_0635 - 2-hydroxy-3-oxopropionate reductase 632 37.73 0 577614..578000 - 128 161528144 - Nmar_0636 - hypothetical protein 633 32.79 0 578082..578450 + 122 161528145 - Nmar_0637 - zinc finger C2H2-type domain-containing protein 634 29.70 -1 578441..578743 - 100 161528146 - Nmar_0638 - hypothetical protein 635 39.82 +1 579023..579685 + 220 161528147 - Nmar_0639 - DSBA oxidoreductase 636 35.42 0 579686..580165 + 159 161528148 - Nmar_0640 - hypothetical protein 637 37.79 +1 580411..581352 + 313 161528149 - Nmar_0641 - hypothetical protein 638 32.24 0 581336..582430 - 364 161528150 - Nmar_0642 - DNA-directed DNA polymerase 639 28.17 -1 582503..582754 + 83 161528151 - Nmar_0643 - hypothetical protein 640 33.33 0 583285..583518 + 77 161528152 - Nmar_0644 - DNA-binding protein 34.31 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.