version 1.0
Nitrosopumilus maritimus SCM1, complete genome - 1..1645259 1795 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 517 35.92 0 465432..466010 - 192 161528029 - Nmar_0521 - chromosome segregation and condensation protein ScpB 518 33.19 0 466065..466742 - 225 161528030 - Nmar_0522 - chromosome segregation and condensation protein ScpA 519 36.56 0 466837..467889 + 350 161528031 - Nmar_0523 - alcohol dehydrogenase 520 29.79 -1 467886..468647 + 253 161528032 - Nmar_0524 - hypothetical protein 521 30.85 0 468711..469274 - 187 161528033 - Nmar_0525 - hypothetical protein 522 36.86 0 469360..469671 + 103 161528034 - Nmar_0526 - translation initiation factor eIF-1A 523 41.15 +1 469717..469908 + 63 161528035 - Nmar_0527 - cold-shock DNA-binding domain-containing protein 524 31.03 0 470238..470846 + 202 161528036 - Nmar_0528 - hypothetical protein 525 35.28 0 470881..471291 + 136 161528037 - Nmar_0529 - translation initiation factor eIF-5A 526 31.16 0 471402..472091 + 229 161528038 - Nmar_0530 - putative ATP binding protein 527 36.87 0 472084..473412 + 442 161528039 - Nmar_0531 - GTP-binding signal recognition particle 528 30.10 -1 473435..474580 + 381 161528040 - Nmar_0532 - pseudouridylate synthase-like protein 529 32.07 0 474754..475464 + 236 161528041 - Nmar_0533 - hypothetical protein 530 33.91 0 475477..475650 - 57 161528042 - Nmar_0534 - ribosomal protein S27a 531 37.39 0 475650..476093 - 147 161528043 - Nmar_0535 - hypothetical protein 532 33.69 0 476150..476710 + 186 161528044 - Nmar_0536 - hypothetical protein 533 35.90 0 476694..477980 - 428 161528045 - Nmar_0537 - phosphoglycerate mutase 534 36.97 0 478209..479225 + 338 161528046 - Nmar_0538 - galactose-1-phosphate uridylyltransferase 535 34.23 0 479268..479714 + 148 161528047 - Nmar_0539 - hypothetical protein 536 31.51 0 479711..480148 - 145 161528048 - Nmar_0540 - GCN5-related N-acetyltransferase 537 30.54 -1 480145..480861 - 238 161528049 - Nmar_0541 - nucleotidyl transferase 538 28.87 -1 480908..482206 - 432 161528050 - Nmar_0542 - phosphomethylpyrimidine kinase 539 37.02 0 482942..484270 + 442 161528051 - Nmar_0543 - thiamine biosynthesis protein ThiC 540 30.37 -1 484253..484657 - 134 161528052 - Nmar_0544 - NUDIX hydrolase 541 32.75 0 484663..485514 - 283 161528053 - Nmar_0545 - prephenate dehydrogenase 542 32.17 0 485511..486881 - 456 161528054 - Nmar_0546 - aminotransferase class I and II 543 35.79 0 486886..487983 - 365 161528055 - Nmar_0547 - chorismate synthase 544 33.96 0 488310..489578 - 422 161528056 - Nmar_0548 - 3-phosphoshikimate 1-carboxyvinyltransferase 545 34.27 0 489568..490422 - 284 161528057 - Nmar_0549 - shikimate kinase 546 33.58 0 490422..491243 - 273 161528058 - Nmar_0550 - shikimate 5-dehydrogenase 547 30.80 -1 491292..491963 - 223 161528059 - Nmar_0551 - 3-dehydroquinate dehydratase, type I 548 34.56 0 491965..493026 - 353 161528060 - Nmar_0552 - 3-dehydroquinate synthase 549 37.04 0 493019..493801 - 260 161528061 - Nmar_0553 - phospho-2-dehydro-3-deoxyheptonate aldolase 550 35.30 0 493936..495054 + 372 161528062 - Nmar_0554 - radical SAM domain-containing protein 551 36.66 0 495049..496491 - 480 161528063 - Nmar_0555 - UbiD family decarboxylase 552 36.60 0 496619..499099 + 826 161528064 - Nmar_0556 - histidine kinase 553 40.36 +1 499165..499548 - 127 161528065 - Nmar_0557 - hypothetical protein 554 42.21 +2 499587..500318 + 243 161528066 - Nmar_0558 - hypothetical protein 555 41.67 +2 500703..501698 + 331 161528067 - Nmar_0559 - trans-sialidase 556 32.69 0 501721..502185 - 154 161528068 - Nmar_0560 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 557 40.62 +1 502286..502999 + 237 161528069 - Nmar_0561 - major intrinsic protein 558 29.58 -1 503038..503463 + 141 161528070 - Nmar_0562 - hypothetical protein 559 34.80 0 503460..504278 + 272 161528071 - Nmar_0563 - hypothetical protein 560 35.27 0 504393..504806 - 137 161528072 - Nmar_0564 - acyl-CoA hydrolase 561 30.66 -1 504947..505693 + 248 161528073 - Nmar_0565 - methyltransferase type 12 562 36.04 0 505750..506082 + 110 161528074 - Nmar_0566 - hypothetical protein 563 33.33 0 506210..506860 + 216 161528075 - Nmar_0567 - hypothetical protein 564 35.57 0 506914..507315 + 133 161528076 - Nmar_0568 - signal-transduction protein 565 30.75 -1 507316..507741 - 141 161528077 - Nmar_0569 - hypothetical protein 566 32.79 0 507793..508344 + 183 161528078 - Nmar_0570 - DNA-3-methyladenine glycosylase I 567 35.22 0 508373..508744 + 123 161528079 - Nmar_0571 - hypothetical protein 568 34.68 0 508749..510014 + 421 161528080 - Nmar_0572 - hypothetical protein 569 36.24 0 510081..510596 + 171 161528081 - Nmar_0573 - Ferritin Dps family protein 570 36.78 0 510959..511132 - 57 161528082 - Nmar_0574 - hypothetical protein 571 27.06 -2 511164..511466 - 100 161528083 - Nmar_0575 - hypothetical protein 572 32.89 0 511861..512307 + 148 161528084 - Nmar_0576 - pyridoxamine 5'-phosphate oxidase-related FMN-binding 573 28.69 -1 512302..513054 - 250 161528085 - Nmar_0577 - hypothetical protein 574 33.90 0 513299..514888 - 529 161528086 - Nmar_0578 - lysyl-tRNA synthetase 575 34.22 0 514892..516475 - 527 161528087 - Nmar_0579 - ELP3 family histone acetyltransferase 576 33.33 0 516532..516840 - 102 161528088 - Nmar_0580 - hypothetical protein 577 38.53 +1 516887..518137 - 416 161528089 - Nmar_0581 - sodium/hydrogen exchanger 578 35.19 0 518212..519234 - 340 161528090 - Nmar_0582 - phosphoribosylformylglycinamidine cyclo-ligase 579 37.47 0 519284..520009 - 241 161528091 - Nmar_0583 - hypothetical protein 580 32.07 0 520425..522080 + 551 161528092 - Nmar_0584 - hypothetical protein 581 33.33 0 522090..522437 - 115 161528093 - Nmar_0585 - hypothetical protein 582 33.99 0 522625..523080 + 151 161528094 - Nmar_0586 - nitrogen regulatory protein P-II 583 38.44 +1 523440..523772 - 110 161528095 - Nmar_0587 - nitrogen regulatory protein P-II 584 40.21 +1 523890..525197 + 435 161528096 - Nmar_0588 - ammonium transporter 585 33.06 0 525213..525581 + 122 161528097 - Nmar_0589 - hypothetical protein 586 36.25 0 525903..526793 + 296 161528098 - Nmar_0590 - CaCA family Na(+)/Ca(+) antiporter 587 31.71 0 526808..528166 - 452 161528099 - Nmar_0591 - peptidase U62 modulator of DNA gyrase 588 36.11 0 528167..529426 - 419 161528100 - Nmar_0592 - radical SAM domain-containing protein 589 31.97 0 529423..530595 - 390 161528101 - Nmar_0593 - radical SAM domain-containing protein 590 37.63 0 530634..531773 - 379 161528102 - Nmar_0594 - 2-alkenal reductase 591 33.09 0 531812..533020 - 402 161528103 - Nmar_0595 - glycosyl transferase family protein 592 34.29 0 533024..533440 - 138 161528104 - Nmar_0596 - cyclase/dehydrase 593 33.09 0 533768..534178 + 136 161528105 - Nmar_0597 - tRNA-binding domain-containing protein 594 34.58 0 534324..534884 - 186 161528106 - Nmar_0598 - 2-alkenal reductase 595 32.53 0 535023..536144 + 373 161528107 - Nmar_0599 - hypothetical protein 596 28.89 -1 536144..536323 + 59 161528108 - Nmar_0600 - hypothetical protein 597 35.68 0 536325..537218 - 297 161528109 - Nmar_0601 - methionine aminopeptidase 598 34.96 0 537506..537751 + 81 161528110 - Nmar_0602 - hypothetical protein 599 32.39 0 537875..539041 + 388 161528111 - Nmar_0603 - hypothetical protein 600 33.81 0 539483..540115 + 210 161528112 - Nmar_0604 - hypothetical protein 601 28.19 -1 540147..541508 - 453 161528113 - Nmar_0605 - restriction modification system DNA specificity subunit 602 34.10 0 541510..543081 - 523 161528114 - Nmar_0606 - type I restriction-modification system, M subunit 603 30.22 -1 543154..544470 + 438 161528115 - Nmar_0607 - restriction modification system DNA specificity subunit 604 35.58 0 544537..547557 + 1006 161528116 - Nmar_0608 - HsdR family type I site-specific deoxyribonuclease 605 33.89 0 547547..548086 + 179 161528117 - Nmar_0609 - hypothetical protein 606 30.37 -1 548173..550365 + 730 161528118 - Nmar_0610 - restriction modification system DNA specificity subunit 607 31.94 0 550362..550865 + 167 161528119 - Nmar_0611 - hypothetical protein 608 29.49 -1 550928..551785 + 285 161528120 - Nmar_0612 - hypothetical protein 609 32.27 0 551790..552731 - 313 161528121 - Nmar_0613 - integrase family protein 610 31.86 0 552946..553557 + 203 161528122 - Nmar_0614 - hypothetical protein 611 31.97 0 553550..554134 + 194 161528123 - Nmar_0615 - hypothetical protein 612 34.85 0 554316..557606 + 1096 161528124 - Nmar_0616 - hypothetical protein 613 29.07 -1 557641..558132 + 163 161528125 - Nmar_0617 - hypothetical protein 614 32.85 0 558117..560579 - 820 161528126 - Nmar_0618 - solute binding protein-like protein 615 30.43 -1 560659..561312 + 217 161528127 - Nmar_0619 - hypothetical protein 616 35.51 0 561296..563041 - 581 161528128 - Nmar_0620 - membrane protein-like protein 34.31 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0