version 1.0
Nitrosopumilus maritimus SCM1, complete genome - 1..1645259 1795 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 482 33.66 0 439159..439461 + 100 161527994 - Nmar_0486 - hypothetical protein 483 30.67 -1 439458..439757 - 99 161527995 - Nmar_0487 - ArsR family transcriptional regulator 484 35.09 0 439798..440196 + 132 161527996 - Nmar_0488 - protein tyrosine phosphatase 485 35.96 0 440199..440882 + 227 161527997 - Nmar_0489 - major intrinsic protein 486 34.75 0 440908..442182 + 424 161527998 - Nmar_0490 - glutamate-1-semialdehyde-2,1-aminomutase 487 36.97 0 442179..443114 + 311 161527999 - Nmar_0491 - porphobilinogen deaminase 488 34.82 0 443111..443851 + 246 161528000 - Nmar_0492 - uroporphyrin-III C-methyltransferase 489 35.20 0 443851..444654 + 267 161528001 - Nmar_0493 - uroporphyrinogen III synthase HEM4 490 27.51 -1 444696..444884 + 62 161528002 - Nmar_0494 - hypothetical protein 491 37.04 0 444970..446370 + 466 161528003 - Nmar_0495 - FeS assembly protein SufB 492 33.19 0 446390..447790 + 466 161528004 - Nmar_0496 - FeS assembly protein SufD 493 34.94 0 447804..449048 + 414 161528005 - Nmar_0497 - SufS subfamily cysteine desulfurase 494 34.23 0 449045..449488 + 147 161528006 - Nmar_0498 - NifU family SUF system FeS assembly protein 495 31.30 0 449490..449834 + 114 161528007 - Nmar_0499 - hypothetical protein 496 36.19 0 449827..451053 - 408 161528008 - Nmar_0500 - phosphoglycerate kinase 497 35.58 0 451172..451840 + 222 161528009 - Nmar_0501 - phosphoesterase PA-phosphatase related 498 33.01 0 451829..452140 - 103 161528010 - Nmar_0502 - hypothetical protein 499 32.29 0 452266..453219 + 317 161528011 - Nmar_0503 - hypothetical protein 500 31.19 0 453282..453887 + 201 161528012 - Nmar_0504 - hypothetical protein 501 37.14 0 453881..454195 - 104 161528013 - Nmar_0505 - hypothetical protein 502 32.85 0 454758..455378 + 206 161528014 - Nmar_0506 - SNARE associated Golgi protein 503 29.79 -1 455379..455999 + 206 161528015 - Nmar_0507 - metal dependent phosphohydrolase 504 35.58 0 455996..456307 - 103 161528016 - Nmar_0508 - hypothetical protein 505 35.58 0 456304..457284 - 326 161528017 - Nmar_0509 - delta-aminolevulinic acid dehydratase 506 33.02 0 457316..458581 - 421 161528018 - Nmar_0510 - glutamyl-tRNA reductase 507 30.28 -1 458578..459231 - 217 161528019 - Nmar_0511 - siroheme synthase 508 33.92 0 459323..460348 + 341 161528020 - Nmar_0512 - AsnC family transcriptional regulator 509 30.97 0 460345..460683 - 112 161528021 - Nmar_0513 - hypothetical protein 510 34.03 0 460691..461689 - 332 161528022 - Nmar_0514 - aldo/keto reductase 511 30.97 0 461765..462442 - 225 161528023 - Nmar_0515 - chlorite dismutase 512 35.28 0 462514..463284 - 256 161528024 - Nmar_0516 - FeS assembly ATPase SufC 513 38.04 +1 463382..464338 - 318 161528025 - Nmar_0517 - zinc finger TFIIB-type domain-containing protein 514 38.15 +1 464335..464583 - 82 161528026 - Nmar_0518 - hypothetical protein 515 31.67 0 464679..464978 - 99 161528027 - Nmar_0519 - signal recognition particle, subunit SRP19 (SRP19) 516 33.33 0 464980..465363 - 127 161528028 - Nmar_0520 - 30S ribosomal protein S8e 517 35.92 0 465432..466010 - 192 161528029 - Nmar_0521 - chromosome segregation and condensation protein ScpB 518 33.19 0 466065..466742 - 225 161528030 - Nmar_0522 - chromosome segregation and condensation protein ScpA 519 36.56 0 466837..467889 + 350 161528031 - Nmar_0523 - alcohol dehydrogenase 520 29.79 -1 467886..468647 + 253 161528032 - Nmar_0524 - hypothetical protein 521 30.85 0 468711..469274 - 187 161528033 - Nmar_0525 - hypothetical protein 522 36.86 0 469360..469671 + 103 161528034 - Nmar_0526 - translation initiation factor eIF-1A 523 41.15 +1 469717..469908 + 63 161528035 - Nmar_0527 - cold-shock DNA-binding domain-containing protein 524 31.03 0 470238..470846 + 202 161528036 - Nmar_0528 - hypothetical protein 525 35.28 0 470881..471291 + 136 161528037 - Nmar_0529 - translation initiation factor eIF-5A 526 31.16 0 471402..472091 + 229 161528038 - Nmar_0530 - putative ATP binding protein 527 36.87 0 472084..473412 + 442 161528039 - Nmar_0531 - GTP-binding signal recognition particle 528 30.10 -1 473435..474580 + 381 161528040 - Nmar_0532 - pseudouridylate synthase-like protein 529 32.07 0 474754..475464 + 236 161528041 - Nmar_0533 - hypothetical protein 530 33.91 0 475477..475650 - 57 161528042 - Nmar_0534 - ribosomal protein S27a 531 37.39 0 475650..476093 - 147 161528043 - Nmar_0535 - hypothetical protein 532 33.69 0 476150..476710 + 186 161528044 - Nmar_0536 - hypothetical protein 533 35.90 0 476694..477980 - 428 161528045 - Nmar_0537 - phosphoglycerate mutase 534 36.97 0 478209..479225 + 338 161528046 - Nmar_0538 - galactose-1-phosphate uridylyltransferase 535 34.23 0 479268..479714 + 148 161528047 - Nmar_0539 - hypothetical protein 536 31.51 0 479711..480148 - 145 161528048 - Nmar_0540 - GCN5-related N-acetyltransferase 537 30.54 -1 480145..480861 - 238 161528049 - Nmar_0541 - nucleotidyl transferase 538 28.87 -1 480908..482206 - 432 161528050 - Nmar_0542 - phosphomethylpyrimidine kinase 539 37.02 0 482942..484270 + 442 161528051 - Nmar_0543 - thiamine biosynthesis protein ThiC 540 30.37 -1 484253..484657 - 134 161528052 - Nmar_0544 - NUDIX hydrolase 541 32.75 0 484663..485514 - 283 161528053 - Nmar_0545 - prephenate dehydrogenase 542 32.17 0 485511..486881 - 456 161528054 - Nmar_0546 - aminotransferase class I and II 543 35.79 0 486886..487983 - 365 161528055 - Nmar_0547 - chorismate synthase 544 33.96 0 488310..489578 - 422 161528056 - Nmar_0548 - 3-phosphoshikimate 1-carboxyvinyltransferase 545 34.27 0 489568..490422 - 284 161528057 - Nmar_0549 - shikimate kinase 546 33.58 0 490422..491243 - 273 161528058 - Nmar_0550 - shikimate 5-dehydrogenase 547 30.80 -1 491292..491963 - 223 161528059 - Nmar_0551 - 3-dehydroquinate dehydratase, type I 548 34.56 0 491965..493026 - 353 161528060 - Nmar_0552 - 3-dehydroquinate synthase 549 37.04 0 493019..493801 - 260 161528061 - Nmar_0553 - phospho-2-dehydro-3-deoxyheptonate aldolase 550 35.30 0 493936..495054 + 372 161528062 - Nmar_0554 - radical SAM domain-containing protein 551 36.66 0 495049..496491 - 480 161528063 - Nmar_0555 - UbiD family decarboxylase 552 36.60 0 496619..499099 + 826 161528064 - Nmar_0556 - histidine kinase 553 40.36 +1 499165..499548 - 127 161528065 - Nmar_0557 - hypothetical protein 554 42.21 +2 499587..500318 + 243 161528066 - Nmar_0558 - hypothetical protein 555 41.67 +2 500703..501698 + 331 161528067 - Nmar_0559 - trans-sialidase 556 32.69 0 501721..502185 - 154 161528068 - Nmar_0560 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 557 40.62 +1 502286..502999 + 237 161528069 - Nmar_0561 - major intrinsic protein 558 29.58 -1 503038..503463 + 141 161528070 - Nmar_0562 - hypothetical protein 559 34.80 0 503460..504278 + 272 161528071 - Nmar_0563 - hypothetical protein 560 35.27 0 504393..504806 - 137 161528072 - Nmar_0564 - acyl-CoA hydrolase 561 30.66 -1 504947..505693 + 248 161528073 - Nmar_0565 - methyltransferase type 12 562 36.04 0 505750..506082 + 110 161528074 - Nmar_0566 - hypothetical protein 563 33.33 0 506210..506860 + 216 161528075 - Nmar_0567 - hypothetical protein 564 35.57 0 506914..507315 + 133 161528076 - Nmar_0568 - signal-transduction protein 565 30.75 -1 507316..507741 - 141 161528077 - Nmar_0569 - hypothetical protein 566 32.79 0 507793..508344 + 183 161528078 - Nmar_0570 - DNA-3-methyladenine glycosylase I 567 35.22 0 508373..508744 + 123 161528079 - Nmar_0571 - hypothetical protein 568 34.68 0 508749..510014 + 421 161528080 - Nmar_0572 - hypothetical protein 569 36.24 0 510081..510596 + 171 161528081 - Nmar_0573 - Ferritin Dps family protein 570 36.78 0 510959..511132 - 57 161528082 - Nmar_0574 - hypothetical protein 571 27.06 -2 511164..511466 - 100 161528083 - Nmar_0575 - hypothetical protein 572 32.89 0 511861..512307 + 148 161528084 - Nmar_0576 - pyridoxamine 5'-phosphate oxidase-related FMN-binding 573 28.69 -1 512302..513054 - 250 161528085 - Nmar_0577 - hypothetical protein 574 33.90 0 513299..514888 - 529 161528086 - Nmar_0578 - lysyl-tRNA synthetase 575 34.22 0 514892..516475 - 527 161528087 - Nmar_0579 - ELP3 family histone acetyltransferase 576 33.33 0 516532..516840 - 102 161528088 - Nmar_0580 - hypothetical protein 577 38.53 +1 516887..518137 - 416 161528089 - Nmar_0581 - sodium/hydrogen exchanger 578 35.19 0 518212..519234 - 340 161528090 - Nmar_0582 - phosphoribosylformylglycinamidine cyclo-ligase 579 37.47 0 519284..520009 - 241 161528091 - Nmar_0583 - hypothetical protein 580 32.07 0 520425..522080 + 551 161528092 - Nmar_0584 - hypothetical protein 581 33.33 0 522090..522437 - 115 161528093 - Nmar_0585 - hypothetical protein 34.31 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0