version 1.0
Nitrosopumilus maritimus SCM1, complete genome - 1..1645259 1795 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 360 33.91 0 328905..329423 + 172 161527872 - Nmar_0364 - hypothetical protein 361 35.29 0 329707..330012 - 101 161527873 - Nmar_0365 - hypothetical protein 362 36.54 0 330106..330759 - 217 161527874 - Nmar_0366 - uracil-DNA glycosylase superfamily protein 363 36.61 0 330772..333639 - 955 161527875 - Nmar_0367 - leucyl-tRNA synthetase 364 36.40 0 333646..336315 - 889 161527876 - Nmar_0368 - alanyl-tRNA synthetase 365 35.51 0 336389..337354 + 321 161527877 - Nmar_0369 - alcohol dehydrogenase 366 35.37 0 337401..337793 + 130 161527878 - Nmar_0370 - hypothetical protein 367 36.66 0 337790..339022 - 410 161527879 - Nmar_0371 - glucose sorbosone dehydrogenase 368 32.21 0 339073..340590 - 505 161527880 - Nmar_0372 - histidine kinase 369 37.84 +1 340670..341179 + 169 161527881 - Nmar_0373 - hypothetical protein 370 46.23 +2 341230..341547 + 105 161527882 - Nmar_0374 - 50S ribosomal protein L12P 371 36.18 0 341630..342262 + 210 161527883 - Nmar_0375 - hypothetical protein 372 30.42 -1 342391..342768 + 125 161527884 - Nmar_0376 - response regulator receiver protein 373 32.55 0 342779..343666 - 295 161527885 - Nmar_0377 - hypothetical protein 374 31.02 0 343754..343969 - 71 161527886 - Nmar_0378 - hypothetical protein 375 33.11 0 343966..344403 - 145 161527887 - Nmar_0379 - hypothetical protein 376 34.26 0 344405..345478 - 357 161527888 - Nmar_0380 - hypothetical protein 377 37.72 0 345558..346424 - 288 161527889 - Nmar_0381 - acidic ribosomal protein P0 378 36.80 0 346417..347079 - 220 161527890 - Nmar_0382 - ribosomal protein L1 379 33.79 0 347271..347708 + 145 161527891 - Nmar_0383 - AsnC family transcriptional regulator 380 34.04 0 348189..348329 + 46 161527892 - Nmar_0384 - hypothetical protein 381 39.38 +1 348548..349027 - 159 161527893 - Nmar_0385 - ribosomal protein L11 382 35.73 0 349062..349520 - 152 161527894 - Nmar_0386 - NusG antitermination factor 383 36.68 0 349736..350512 + 258 161527895 - Nmar_0387 - hypothetical protein 384 35.00 0 350509..350808 + 99 161527896 - Nmar_0388 - methylated-DNA--protein-cysteine methyltransferase 385 35.86 0 350810..351205 - 131 161527897 - Nmar_0389 - glyoxalase/bleomycin resistance protein/dioxygenase 386 36.40 0 351250..351705 - 151 161527898 - Nmar_0390 - 50S ribosomal protein L19e 387 37.28 0 351689..352093 - 134 161527899 - Nmar_0391 - ribosomal protein L32e 388 37.53 0 352349..353848 + 499 161527900 - Nmar_0392 - phosphoenolpyruvate carboxykinase 389 36.21 0 353850..355832 - 660 161527901 - Nmar_0393 - peptidase S8 and S53 subtilisin kexin sedolisin 390 39.45 +1 355951..356571 + 206 161527902 - Nmar_0394 - superoxide dismutase 391 36.53 0 356654..357091 + 145 161527903 - Nmar_0395 - prefoldin, alpha subunit 392 38.00 +1 357095..358636 + 513 161527904 - Nmar_0396 - signal recognition particle-docking protein FtsY 393 36.28 0 358633..359547 + 304 161527905 - Nmar_0397 - ornithine carbamoyltransferase 394 38.92 +1 359584..360066 + 160 161527906 - Nmar_0398 - 50S ribosomal protein L18P 395 38.91 +1 360068..360784 + 238 161527907 - Nmar_0399 - 30S ribosomal protein S5P 396 35.90 0 360791..361258 + 155 161527908 - Nmar_0400 - 50S ribosomal protein L30P 397 43.01 +2 361260..361724 + 154 161527909 - Nmar_0401 - ribosomal protein L15 398 42.28 +2 361717..363147 + 476 161527910 - Nmar_0402 - preprotein translocase, SecY subunit 399 37.13 0 363134..363712 + 192 161527911 - Nmar_0403 - adenylate kinase 400 37.18 0 363716..364339 + 207 161527912 - Nmar_0404 - membrane protein-like protein 401 36.36 0 364336..364896 + 186 161527913 - Nmar_0405 - cytidylate kinase 402 36.34 0 364893..365891 + 332 161527914 - Nmar_0406 - pseudouridylate synthase subunit TruB 403 32.89 0 365895..366341 + 148 161527915 - Nmar_0407 - hypothetical protein 404 37.47 0 366847..367329 + 160 161527916 - Nmar_0408 - secreted protein 405 35.69 0 367332..368645 - 437 161527917 - Nmar_0409 - FAD dependent oxidoreductase 406 36.17 0 368734..369015 + 93 161527918 - Nmar_0410 - hypothetical protein 407 29.92 -1 369033..369413 + 126 161527919 - Nmar_0411 - hypothetical protein 408 33.75 0 369607..370575 - 322 161527920 - Nmar_0412 - glyoxylate reductase 409 35.95 0 370822..372732 + 636 161527921 - Nmar_0413 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 410 38.11 +1 372722..373684 + 320 161527922 - Nmar_0414 - pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit 411 33.11 0 373734..374174 + 146 161527923 - Nmar_0415 - hypothetical protein 412 32.58 0 374167..374700 - 177 161527924 - Nmar_0416 - hypothetical protein 413 37.10 0 374758..375129 + 123 161527925 - Nmar_0417 - hypothetical protein 414 33.33 0 375131..375700 - 189 161527926 - Nmar_0418 - hypothetical protein 415 34.74 0 375731..376510 - 259 161527927 - Nmar_0419 - hypothetical protein 416 39.40 +1 376584..377852 + 422 161527928 - Nmar_0420 - 3-isopropylmalate dehydratase 417 35.82 0 377852..378334 + 160 161527929 - Nmar_0421 - 3-isopropylmalate dehydratase, small subunit 418 38.91 +1 378343..379758 + 471 161527930 - Nmar_0422 - 3-isopropylmalate dehydratase, large subunit 419 33.33 0 379760..380344 + 194 161527931 - Nmar_0423 - 3-isopropylmalate dehydratase, small subunit 420 33.33 0 380322..381041 - 239 161527932 - Nmar_0424 - nucleotidyl transferase 421 38.00 +1 381045..381494 - 149 161527933 - Nmar_0425 - ribosomal protein S9 422 34.41 0 381491..381955 - 154 161527934 - Nmar_0426 - ribosomal protein L13 423 35.06 0 381948..382295 - 115 161527935 - Nmar_0427 - ribosomal protein L15 424 36.49 0 382339..383004 - 221 161527936 - Nmar_0428 - RNA polymerase insert 425 32.77 0 383085..383438 + 117 161527937 - Nmar_0429 - hypothetical protein 426 35.37 0 383542..384228 + 228 161527938 - Nmar_0430 - putative RNA-associated protein 427 37.30 0 384228..384908 + 226 161527939 - Nmar_0431 - exosome complex RNA-binding protein Rrp4 428 39.05 +1 384908..385642 + 244 161527940 - Nmar_0432 - exosome complex exonuclease 1 429 38.22 +1 385645..386463 + 272 161527941 - Nmar_0433 - exosome complex RNA-binding protein Rrp42 430 34.74 0 386465..386677 + 70 161527942 - Nmar_0434 - hypothetical protein 431 33.33 0 386661..386906 + 81 161527943 - Nmar_0435 - hypothetical protein 432 36.67 0 386930..387319 + 129 161527944 - Nmar_0436 - prefoldin, beta subunit 433 35.66 0 387372..388058 + 228 161527945 - Nmar_0437 - ERCC4 domain-containing protein 434 31.92 0 388048..388542 + 164 161527946 - Nmar_0438 - TPR repeat-containing protein 435 35.42 0 388545..389024 - 159 161527947 - Nmar_0439 - nucleotide binding protein, PINc 436 34.17 0 389014..389850 - 278 161527948 - Nmar_0440 - ATP-NAD/AcoX kinase 437 36.64 0 389913..390758 + 281 161527949 - Nmar_0441 - rhodanese domain-containing protein 438 37.50 0 390760..391071 + 103 161527950 - Nmar_0442 - hypothetical protein 439 37.76 0 391108..392055 + 315 161527951 - Nmar_0443 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 440 35.56 0 392111..394177 + 688 161527952 - Nmar_0444 - glycosyl transferase family protein 441 31.76 0 394174..395703 - 509 161527953 - Nmar_0445 - hypothetical protein 442 37.48 0 396135..397460 + 441 161527954 - Nmar_0446 - sodium/hydrogen exchanger 443 32.87 0 397453..397881 + 142 161527955 - Nmar_0447 - hypothetical protein 444 25.76 -2 398023..398286 + 87 161527956 - Nmar_0448 - hypothetical protein 445 36.08 0 398278..398787 - 169 161527957 - Nmar_0449 - 50S ribosomal protein L10e 446 31.17 0 398850..399449 + 199 161527958 - Nmar_0450 - tRNA intron endonuclease 447 31.51 0 399439..400095 - 218 161527959 - Nmar_0451 - DNA repair helicase 448 32.57 0 400165..400557 - 130 161527960 - Nmar_0452 - response regulator receiver protein 449 29.37 -1 400592..401197 + 201 161527961 - Nmar_0453 - hypothetical protein 450 31.91 0 401255..401536 + 93 161527962 - Nmar_0454 - hypothetical protein 451 32.64 0 401560..402282 - 240 161527963 - Nmar_0455 - hypothetical protein 452 37.52 0 402319..410613 + 2764 161527964 - Nmar_0456 - hypothetical protein 453 35.98 0 410757..411020 + 87 161527965 - Nmar_0457 - hypothetical protein 454 31.10 0 411035..411481 - 148 161527966 - Nmar_0458 - hypothetical protein 455 38.68 +1 411535..412170 - 211 161527967 - Nmar_0459 - hypothetical protein 456 32.06 0 412369..414171 + 600 161527968 - Nmar_0460 - histidine kinase 457 35.26 0 414853..415629 + 258 161527969 - Nmar_0461 - hypothetical protein 458 36.57 0 415626..416150 - 174 161527970 - Nmar_0462 - hypothetical protein 459 33.03 0 416242..417243 + 333 161527971 - Nmar_0463 - hypothetical protein 34.31 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0