version 1.0
Nitrosopumilus maritimus SCM1, complete genome - 1..1645259 1795 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 305 28.70 -1 272612..273388 + 258 161527817 - Nmar_0309 - GCN5-related N-acetyltransferase 306 33.22 0 273380..274249 - 289 161527818 - Nmar_0310 - 5-carboxymethyl-2-hydroxymuconate Delta-isomerase 307 33.04 0 274255..275964 - 569 161527819 - Nmar_0311 - glutamyl-tRNA synthetase 308 34.15 0 275986..276966 - 326 161527820 - Nmar_0312 - polyprenyl synthetase 309 32.72 0 276953..277603 - 216 161527821 - Nmar_0313 - isopentenyl-diphosphate delta-isomerase, type 1 310 30.65 -1 277603..278346 - 247 161527822 - Nmar_0314 - aspartate/glutamate/uridylate kinase 311 30.89 0 278371..279312 - 313 161527823 - Nmar_0315 - mevalonate kinase 312 35.26 0 279341..279964 - 207 161527824 - Nmar_0316 - 30S ribosomal protein S2 313 35.43 0 279972..281210 - 412 161527825 - Nmar_0317 - phosphopyruvate hydratase 314 31.87 0 281212..281484 - 90 161527826 - Nmar_0318 - DNA-directed RNA polymerase subunit N 315 28.29 -1 281601..282215 - 204 161527827 - Nmar_0319 - translin family protein 316 34.57 0 282289..282936 + 215 161527828 - Nmar_0320 - carbohydrate kinase, YjeF related protein 317 33.50 0 282933..283541 + 202 161527829 - Nmar_0321 - beta-lactamase domain-containing protein 318 33.33 0 283546..284607 + 353 161527830 - Nmar_0322 - hypothetical protein 319 32.94 0 284600..286360 - 586 161527831 - Nmar_0323 - glucosamine--fructose-6-phosphate aminotransferase, isomerizing 320 36.30 0 286452..287057 - 201 161527832 - Nmar_0324 - 30S ribosomal protein S4 321 41.54 +2 287067..287651 - 194 161527833 - Nmar_0325 - 30S ribosomal protein S13P 322 33.01 0 287984..288292 + 102 161527834 - Nmar_0326 - hypothetical protein 323 33.33 0 288284..288787 - 167 161527835 - Nmar_0327 - hypothetical protein 324 37.35 0 288926..289897 + 323 161527836 - Nmar_0328 - periplasmic solute binding protein 325 36.32 0 289894..290664 + 256 161527837 - Nmar_0329 - ABC transporter related 326 35.87 0 290680..291624 + 314 161527838 - Nmar_0330 - ABC-3 protein 327 35.32 0 291621..292727 + 368 161527839 - Nmar_0331 - ABC-3 protein 328 32.37 0 292745..294097 - 450 161527840 - Nmar_0332 - cation diffusion facilitator family transporter 329 34.23 0 294247..297375 + 1042 161527841 - Nmar_0333 - hypothetical protein 330 39.05 +1 297421..298452 + 343 161527842 - Nmar_0334 - hypothetical protein 331 33.95 0 298503..298826 + 107 161527843 - Nmar_0335 - hypothetical protein 332 35.93 0 298821..300401 - 526 161527844 - Nmar_0336 - radical SAM domain-containing protein 333 33.72 0 300474..301250 - 258 161527845 - Nmar_0337 - 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase 334 35.30 0 301284..302198 - 304 161527846 - Nmar_0338 - malate dehydrogenase 335 31.20 0 302289..303509 + 406 161527847 - Nmar_0339 - hypothetical protein 336 32.71 0 303510..304307 + 265 161527848 - Nmar_0340 - ExsB family protein 337 33.85 0 304304..305470 + 388 161527849 - Nmar_0341 - cysteine desulfurase 338 33.71 0 305467..306258 - 263 161527850 - Nmar_0342 - hypothetical protein 339 40.11 +1 306364..307248 - 294 161527851 - Nmar_0343 - hypothetical protein 340 38.11 +1 307311..308168 - 285 161527852 - Nmar_0344 - hypothetical protein 341 38.45 +1 308232..309071 - 279 161527853 - Nmar_0345 - hypothetical protein 342 33.33 0 309252..309503 + 83 161527854 - Nmar_0346 - RNA polymerase Rpb5 343 37.43 0 309504..312851 + 1115 161527855 - Nmar_0347 - DNA-directed RNA polymerase subunit beta 344 37.92 +1 312851..316642 + 1263 161527856 - Nmar_0348 - DNA-directed RNA polymerase subunit A' 345 33.74 0 316647..316889 + 80 161527857 - Nmar_0349 - like-Sm ribonucleoprotein core 346 34.10 0 316926..318104 + 392 161527858 - Nmar_0350 - hypothetical protein 347 31.89 0 318160..319821 + 553 161527859 - Nmar_0351 - TPR repeat-containing protein 348 31.17 0 319896..320219 + 107 161527860 - Nmar_0352 - ribosomal protein L7Ae/L30e/S12e/Gadd45 349 35.27 0 320271..320735 + 154 161527861 - Nmar_0353 - NusA family protein 350 38.13 +1 320739..321176 + 145 161527862 - Nmar_0354 - 30S ribosomal protein S12P 351 36.00 0 321179..321778 + 199 161527863 - Nmar_0355 - 30S ribosomal protein S7P 352 30.91 0 321937..322266 - 109 161527864 - Nmar_0356 - hypothetical protein 353 35.89 0 322289..322993 + 234 161527865 - Nmar_0357 - hypothetical protein 354 32.44 0 322995..323444 + 149 161527866 - Nmar_0358 - GCN5-related N-acetyltransferase 355 34.63 0 323446..324444 - 332 161527867 - Nmar_0359 - dehydrogenase (flavoprotein)-like protein 356 38.14 +1 324760..325362 + 200 161527868 - Nmar_0360 - nitroreductase 357 36.18 0 325543..325788 + 81 161527869 - Nmar_0361 - hypothetical protein 358 38.89 +1 326058..326291 + 77 161527870 - Nmar_0362 - hypothetical protein 359 35.66 0 326498..328084 - 528 161527871 - Nmar_0363 - putative periplasmic ligand-binding sensor protein 360 33.91 0 328905..329423 + 172 161527872 - Nmar_0364 - hypothetical protein 361 35.29 0 329707..330012 - 101 161527873 - Nmar_0365 - hypothetical protein 362 36.54 0 330106..330759 - 217 161527874 - Nmar_0366 - uracil-DNA glycosylase superfamily protein 363 36.61 0 330772..333639 - 955 161527875 - Nmar_0367 - leucyl-tRNA synthetase 364 36.40 0 333646..336315 - 889 161527876 - Nmar_0368 - alanyl-tRNA synthetase 365 35.51 0 336389..337354 + 321 161527877 - Nmar_0369 - alcohol dehydrogenase 366 35.37 0 337401..337793 + 130 161527878 - Nmar_0370 - hypothetical protein 367 36.66 0 337790..339022 - 410 161527879 - Nmar_0371 - glucose sorbosone dehydrogenase 368 32.21 0 339073..340590 - 505 161527880 - Nmar_0372 - histidine kinase 369 37.84 +1 340670..341179 + 169 161527881 - Nmar_0373 - hypothetical protein 370 46.23 +2 341230..341547 + 105 161527882 - Nmar_0374 - 50S ribosomal protein L12P 371 36.18 0 341630..342262 + 210 161527883 - Nmar_0375 - hypothetical protein 372 30.42 -1 342391..342768 + 125 161527884 - Nmar_0376 - response regulator receiver protein 373 32.55 0 342779..343666 - 295 161527885 - Nmar_0377 - hypothetical protein 374 31.02 0 343754..343969 - 71 161527886 - Nmar_0378 - hypothetical protein 375 33.11 0 343966..344403 - 145 161527887 - Nmar_0379 - hypothetical protein 376 34.26 0 344405..345478 - 357 161527888 - Nmar_0380 - hypothetical protein 377 37.72 0 345558..346424 - 288 161527889 - Nmar_0381 - acidic ribosomal protein P0 378 36.80 0 346417..347079 - 220 161527890 - Nmar_0382 - ribosomal protein L1 379 33.79 0 347271..347708 + 145 161527891 - Nmar_0383 - AsnC family transcriptional regulator 380 34.04 0 348189..348329 + 46 161527892 - Nmar_0384 - hypothetical protein 381 39.38 +1 348548..349027 - 159 161527893 - Nmar_0385 - ribosomal protein L11 382 35.73 0 349062..349520 - 152 161527894 - Nmar_0386 - NusG antitermination factor 383 36.68 0 349736..350512 + 258 161527895 - Nmar_0387 - hypothetical protein 384 35.00 0 350509..350808 + 99 161527896 - Nmar_0388 - methylated-DNA--protein-cysteine methyltransferase 385 35.86 0 350810..351205 - 131 161527897 - Nmar_0389 - glyoxalase/bleomycin resistance protein/dioxygenase 386 36.40 0 351250..351705 - 151 161527898 - Nmar_0390 - 50S ribosomal protein L19e 387 37.28 0 351689..352093 - 134 161527899 - Nmar_0391 - ribosomal protein L32e 388 37.53 0 352349..353848 + 499 161527900 - Nmar_0392 - phosphoenolpyruvate carboxykinase 389 36.21 0 353850..355832 - 660 161527901 - Nmar_0393 - peptidase S8 and S53 subtilisin kexin sedolisin 390 39.45 +1 355951..356571 + 206 161527902 - Nmar_0394 - superoxide dismutase 391 36.53 0 356654..357091 + 145 161527903 - Nmar_0395 - prefoldin, alpha subunit 392 38.00 +1 357095..358636 + 513 161527904 - Nmar_0396 - signal recognition particle-docking protein FtsY 393 36.28 0 358633..359547 + 304 161527905 - Nmar_0397 - ornithine carbamoyltransferase 394 38.92 +1 359584..360066 + 160 161527906 - Nmar_0398 - 50S ribosomal protein L18P 395 38.91 +1 360068..360784 + 238 161527907 - Nmar_0399 - 30S ribosomal protein S5P 396 35.90 0 360791..361258 + 155 161527908 - Nmar_0400 - 50S ribosomal protein L30P 397 43.01 +2 361260..361724 + 154 161527909 - Nmar_0401 - ribosomal protein L15 398 42.28 +2 361717..363147 + 476 161527910 - Nmar_0402 - preprotein translocase, SecY subunit 399 37.13 0 363134..363712 + 192 161527911 - Nmar_0403 - adenylate kinase 400 37.18 0 363716..364339 + 207 161527912 - Nmar_0404 - membrane protein-like protein 401 36.36 0 364336..364896 + 186 161527913 - Nmar_0405 - cytidylate kinase 402 36.34 0 364893..365891 + 332 161527914 - Nmar_0406 - pseudouridylate synthase subunit TruB 403 32.89 0 365895..366341 + 148 161527915 - Nmar_0407 - hypothetical protein 404 37.47 0 366847..367329 + 160 161527916 - Nmar_0408 - secreted protein 34.31 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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