IslandPath Analysis: Neisseria meningitidis FAM18



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.80   STD DEV: 7.07
Neisseria meningitidis FAM18, complete genome - 1..2194961
1917 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
873	 45.16	0	954337..954615	+	92	121634774	-	NMC0954	-	putative integral membrane protein
874	 29.86	-2	954773..955060	+	95	121634775	-	NMC0955	-	hypothetical protein
875	 42.86	-1	955002..955442	+	146	121634776	-	NMC0956	-	putative cell-surface protein
876	 48.66	0	955953..956513	+	186	121634777	-	NMC0957	-	hypothetical protein
877	 55.19	0	956721..958106	-	461	121634778	pntB	NMC0958	-	pyridine nucleotide transhydrogenase
878	 58.07	0	958172..958555	-	127	121634779	-	NMC0959	-	hypothetical protein
879	 58.17	0	958559..960100	-	513	121634780	pntA	NMC0960	-	NAD(P) transhydrogenase subunit alpha
880	 55.40	0	960393..961226	+	277	121634781	serB	NMC0961	-	phosphoserine phosphatase
881	 59.18	+1	961271..962512	+	413	121634782	-	NMC0962	-	putative integral membrane protein
882	 58.00	0	962677..964257	+	526	121634783	purH	NMC0963	-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
883	 53.71	0	964856..965812	+	318	121634784	-	NMC0964	-	putative transposase
884	 51.49	0	965966..966400	+	144	121634785	-	NMC0965	-	putative phage related protein
885	 49.32	0	966372..966809	+	145	121634786	-	NMC0966	-	putative phage related protein
886	 55.49	0	967117..967662	+	181	121634787	-	NMC0967	-	putative amidase
887	 52.90	0	967895..968032	+	45	121634788	-	NMC0969	-	putative phage related protein
888	 54.43	0	968035..968271	+	78	121634789	-	NMC0970	-	putative phage related protein
889	 53.04	0	968252..968662	+	136	121634790	-	NMC0971	-	putative phage related protein
890	 61.01	+1	968706..968864	+	52	121634791	-	NMC0972	-	putative phage related protein
891	 46.20	0	968909..969079	-	56	121634792	-	NMC0973	-	hypothetical protein
892	 42.01	-1	969092..969310	+	72	121634793	-	NMC0974	-	putative phage related protein
893	 51.35	0	969503..970468	-	321	121634794	-	NMC0976	-	putative transposase for IS1655
894	 53.08	0	970767..971774	-	335	121634795	-	NMC0977	-	putative transposase for IS1106
895	 49.04	0	971907..973676	-	589	121634796	-	NMC0978	-	putative surface fibril protein
896	 50.72	0	975798..976004	-	68	121634797	-	NMC0980	-	rubredoxin
897	 58.52	0	976440..977531	-	363	121634798	-	NMC0981	-	putative acyl-CoA dehydrogenase
898	 53.36	0	977666..978349	-	227	121634799	-	NMC0982	-	hypothetical protein
899	 59.14	+1	978369..978740	-	123	121634800	-	NMC0983	-	hypothetical protein
900	 54.79	0	979035..980726	-	563	121634801	dld	NMC0984	-	D-lactate dehydrogenase
901	 55.93	0	981164..985084	+	1306	121634802	-	NMC0985	-	putative oxidoreductase
902	 53.41	0	985137..986162	+	341	121634803	-	NMC0986	-	hypothetical protein
903	 52.78	0	986593..987600	+	335	121634804	-	NMC0988	-	putative transposase for IS1106
904	 59.94	+1	988668..989306	-	212	121634805	-	NMC0992	-	putative phage integrase
905	 52.40	0	989615..990490	-	291	121634806	-	NMC0993	-	hypothetical protein
906	 50.84	0	990535..990831	-	98	121634807	-	NMC0995	-	hypothetical protein
907	 41.27	-1	991130..991507	+	125	121634808	-	NMC0997	-	putative phage repressor
908	 41.46	-1	991536..991781	+	81	121634809	-	NMC0998	-	hypothetical protein
909	 44.09	-1	991867..991959	+	30	121634810	-	NMC0999	-	hypothetical protein
910	 37.94	-1	992071..992982	+	303	121634811	-	NMC1000	-	hypothetical protein
911	 32.51	-2	992979..993461	+	160	121634812	-	NMC1001	-	hypothetical protein
912	 56.75	0	993551..994054	+	167	121634813	-	NMC1002	-	hypothetical protein
913	 50.36	0	994491..994901	+	136	121634814	-	NMC1005	-	hypothetical protein
914	 47.73	0	994906..995655	+	249	121634815	-	NMC1006	-	putative transposase
915	 50.66	0	996397..997002	-	201	121634816	-	NMC1007	-	hypothetical protein
916	 51.35	0	997069..998034	-	321	121634817	-	NMC1008	-	transposase for IS1655
917	 53.88	0	998811..999866	-	351	121634818	-	NMC1009	-	putative sulphate-binding protein
918	 51.35	0	999972..1000454	-	160	121634819	-	NMC1010	-	hypothetical protein
919	 53.30	0	1000501..1001637	-	378	121634820	purK	NMC1011	-	phosphoribosylaminoimidazole carboxylase ATPase subunit
920	 36.08	-2	1001634..1002179	-	181	121634821	-	NMC1012	-	hypothetical protein
921	 55.83	0	1002176..1003651	-	491	121634822	trpE	NMC1013	-	anthranilate synthase component I
922	 50.00	0	1003762..1004127	-	121	121634823	-	NMC1014	-	hypothetical protein
923	 50.73	0	1004148..1006073	-	641	121634824	abcZ	NMC1015	-	putative ABC transporter ATP-binding protein
924	 51.47	0	1006077..1006721	-	214	121634825	dedA	NMC1016	-	DedA protein ortholog
925	 55.00	0	1006812..1008062	-	416	121634826	glyA	NMC1017	-	serine hydroxymethyltransferase
926	 47.18	0	1008543..1010318	-	591	121634827	ggt	NMC1018	-	gamma-glutamyltranspeptidase
927	 33.77	-2	1010889..1011116	+	75	121634828	-	NMC1020	-	hypothetical protein
928	 46.12	0	1011092..1011310	+	72	121634829	-	NMC1021	-	hypothetical protein
929	 53.64	0	1011469..1012443	-	324	121634830	fbp	NMC1022	-	fructose-1,6-bisphosphatase
930	 56.03	0	1012689..1013534	-	281	121634831	-	NMC1024	-	hypothetical protein
931	 55.89	0	1013622..1014224	-	200	121634832	-	NMC1026	-	putative integral membrane protein
932	 52.66	0	1014280..1014636	+	118	121634833	folB	NMC1027	-	dihydroneopterin aldolase
933	 52.51	0	1014670..1015206	+	178	121634834	-	NMC1028	-	hypothetical protein
934	 57.22	0	1016250..1016609	-	119	121634835	-	NMC1029	-	putative integral membrane protein
935	 56.53	0	1016638..1017318	-	226	121634836	-	NMC1030	-	putative integral membrane protein
936	 55.32	0	1017483..1020515	+	1010	121634837	-	NMC1031	-	putative cell-division protein
937	 57.96	0	1020740..1022002	-	420	121634838	proA	NMC1032	-	gamma-glutamyl phosphate reductase
938	 56.67	0	1022015..1023124	-	369	121634839	proB	NMC1033	-	gamma-glutamyl kinase
939	 55.34	0	1023610..1025163	+	517	121634840	leuA	NMC1034	-	2-isopropylmalate synthase
940	 52.04	0	1025363..1026025	+	220	121634841	-	NMC1035	-	hypothetical protein
941	 54.58	0	1026108..1026959	-	283	121634842	lgt	NMC1036	-	prolipoprotein diacylglyceryl transferase
942	 56.41	0	1027032..1028162	-	376	121634843	-	NMC1037	-	hypothetical protein
943	 53.73	0	1028332..1029228	+	298	121634844	argB	NMC1038	-	acetylglutamate kinase
944	 54.11	0	1031085..1031753	-	222	121634845	-	NMC1039	-	hypothetical protein
945	 54.64	0	1031750..1032481	-	243	121634846	-	NMC1040	-	hypothetical protein
946	 58.74	0	1032523..1033140	-	205	121634847	-	NMC1041	-	ABC transporter ATP-binding protein
947	 46.67	0	1033116..1033295	+	59	121634848	-	NMC1042	-	hypothetical protein
948	 38.89	-1	1033495..1034394	-	299	121634849	-	NMC1044	-	putative DNA-binding protein
949	 38.49	-1	1034438..1034689	+	83	121634850	-	NMC1045	-	putative DNA-binding protein (phage related)
950	 54.34	0	1034691..1036670	+	659	121634851	-	NMC1046	-	putative phage transposase
951	 50.82	0	1036706..1037620	+	304	121634852	-	NMC1048	-	putative phage transposase
952	 48.45	0	1037686..1037976	+	96	121634853	-	NMC1049	-	hypothetical protein
953	 44.44	-1	1037963..1038088	+	41	121634854	-	NMC1050	-	hypothetical protein
954	 52.87	0	1038085..1038258	+	57	121634855	-	NMC1051	-	hypothetical protein
955	 52.38	0	1038251..1038418	+	55	121634856	-	NMC1052	-	hypothetical protein
956	 35.53	-2	1038482..1038709	+	75	121634857	-	NMC1053	-	hypothetical protein
957	 52.22	0	1038724..1039242	+	172	121634858	gam	NMC1054	-	putative host-nuclease inhibitor protein
958	 51.35	0	1039375..1040340	-	321	121634859	-	NMC1055	-	transposase for IS1655
959	 61.68	+1	1041177..1041737	+	186	121634860	-	NMC1057	-	hypothetical protein
960	 58.21	0	1041748..1043721	+	657	121634861	-	NMC1058	-	putative phage tail fibre protein
961	 59.24	+1	1045258..1045863	+	201	121634862	-	NMC1059	-	hypothetical protein
962	 58.92	+1	1045842..1046138	+	98	121634863	-	NMC1060	-	hypothetical protein
963	 52.27	0	1046454..1047597	-	380	121634864	-	NMC1062	-	ABC transporter ATP-binding protein
964	 54.17	0	1048039..1048686	-	215	121634865	-	NMC1063	-	putative periplasmic protein
965	 52.42	0	1048683..1049054	-	123	121634866	-	NMC1065	-	putative periplasmic protein
966	 52.98	0	1049061..1049732	-	223	121634867	-	NMC1066	-	putative periplasmic protein
967	 58.47	0	1049897..1050616	-	239	121634868	-	NMC1067	-	short chain dehydrogenase
968	 64.99	+1	1050699..1052012	-	437	121634869	-	NMC1068	-	putative oxidoreductase
969	 53.95	0	1052409..1053281	-	290	121634870	-	NMC1069	-	putative poly-isoprenyl transferase
970	 58.20	0	1053296..1055314	+	672	121634871	hscA	NMC1070	-	chaperone protein HscA
971	 49.47	0	1055637..1056200	+	187	121634872	-	NMC1071	-	hypothetical protein
972	 53.10	0	1056483..1056998	+	171	121634873	-	NMC1072	-	hypothetical protein
51.80	MEAN

7.07	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.