IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
943	 56.58	0	993778..994749	+	323	15793990	rfaE	NMA1034	-	DP-heptose synthetase
944	 33.82	-2	994786..996021	+	411	15793991	nmgII	NMA1035	-	modification methylase
945	 31.55	-2	996023..997141	+	372	15793992	nmgI	NMA1036	-	type II restriction endonuclease
946	 50.45	0	997182..998186	+	334	15793993	rfaD	NMA1037	-	ADP-L-glycero-D-mannoheptose epimerase
947	 52.17	0	998259..999803	+	514	15793994	-	NMA1038	-	type I restriction-modification system protein
948	 52.23	0	999800..1000810	+	336	15793995	-	NMA1039	-	DNA-binding protein
949	 54.47	0	1005418..1007697	-	759	15793996	clpA	NMA1045	-	ATP-dependent protease ATP-binding protein
950	 50.96	0	1007701..1008012	-	103	15793997	-	NMA1046	-	hypothetical protein
951	 46.57	0	1008270..1008473	+	67	15793998	cspA	NMA1047	-	transcriptional regulator
952	 60.44	+1	1008771..1010102	-	443	15793999	-	NMA1048	-	hypothetical protein
953	 51.56	0	1010193..1010768	+	191	15794000	-	NMA1049	-	hypothetical protein
954	 52.94	0	1010815..1011528	+	237	15794001	-	NMA1051	-	hypothetical protein
955	 57.26	0	1011597..1013297	+	566	15794002	recJ	NMA1052	-	single-stranded-DNA-specific exonuclease
956	 55.65	0	1013598..1014959	+	453	15794003	pcnB	NMA1053	-	poly(A) polymerase
957	 50.46	0	1015129..1015455	+	108	15794004	-	NMA1054	-	periplasmic protein
958	 54.72	0	1015560..1016513	-	317	15794005	-	NMA1056	-	hypothetical protein
959	 51.95	0	1016652..1017344	-	230	15794006	-	NMA1057	-	glycosyl transferase
960	 54.11	0	1017161..1017853	-	230	15794007	-	NMA1058	-	hypothetical protein
961	 51.21	0	1018045..1018749	+	234	15794008	-	NMA1059	-	periplasmic protein
962	 53.97	0	1018813..1019379	-	188	15794009	dcd	NMA1060	-	deoxycytidine triphosphate deaminase
963	 50.84	0	1019445..1019861	-	138	15794010	-	NMA1061	-	periplasmic protein
964	 52.44	0	1019913..1020812	-	299	15794011	rdgC	NMA1062	-	recombination associated protein
965	 53.09	0	1020843..1022300	-	485	15794012	engA	NMA1063	-	GTP-binding protein EngA
966	 51.43	0	1022454..1023083	-	209	15794013	-	NMA1064	-	membrane protein
967	 52.24	0	1023084..1024379	-	431	15794014	hisS	NMA1065	-	histidyl-tRNA synthetase
968	 46.42	0	1024473..1025129	-	218	15794015	-	NMA1066	-	periplasmic protein
969	 41.67	-1	1025187..1025378	-	63	15794016	-	NMA1067	-	hypothetical protein
970	 27.93	-2	1025411..1025947	-	178	15794017	-	NMA1068	-	hypothetical protein
971	 42.79	-1	1026115..1026315	-	66	15794018	-	NMA1070	-	hypothetical protein
972	 31.19	-2	1026430..1026849	-	139	15794019	-	NMA1071	-	hypothetical protein
973	 35.52	-2	1026907..1027272	-	121	15794020	-	NMA1072	-	hypothetical protein
974	 47.99	0	1027254..1027799	-	181	15794021	-	NMA1073	-	hypothetical protein
975	 26.37	-2	1027962..1028234	-	90	15794022	-	NMA1074	-	membrane protein
976	 44.44	-1	1028303..1028473	-	56	15794023	-	NMA1075	-	hypothetical protein
977	 35.25	-2	1028503..1028763	+	86	15794024	-	NMA1076	-	hypothetical protein
978	 28.51	-2	1029110..1029358	-	82	15794025	-	NMA1077	-	hypothetical protein
979	 46.61	0	1029404..1029772	-	122	15794026	-	NMA1078	-	hypothetical protein
980	 34.15	-2	1029914..1030159	-	81	15794027	-	NMA1079	-	hypothetical protein
981	 30.77	-2	1030388..1030504	-	38	15794028	-	NMA1080	-	hypothetical protein
982	 26.39	-2	1030563..1030850	-	95	15794029	-	NMA1081	-	membrane protein
983	 24.46	-2	1031157..1031528	-	123	15794030	-	NMA1082	-	hypothetical protein
984	 44.82	0	1031662..1032105	-	147	15794031	-	NMA1083	-	periplasmic protein
985	 52.64	0	1032148..1033017	-	289	15794032	-	NMA1084	-	periplasmic protein
986	 52.16	0	1033181..1034104	+	307	15794033	-	NMA1085	-	hypothetical protein
987	 57.48	0	1034182..1034823	-	213	15794034	-	NMA1086	-	hypothetical protein
988	 53.91	0	1034878..1035669	-	263	15794035	-	NMA1087	-	spermidine synthase
989	 56.44	0	1036052..1036843	+	263	15794036	panB	NMA1088	-	3-methyl-2-oxobutanoate hydroxymethyltransferase
990	 53.88	0	1036966..1037802	+	278	15794037	panC	NMA1089	-	pantoate--beta-alanine ligase
991	 55.57	0	1037967..1039805	+	612	15794038	-	NMA1090	-	periplasmic protein
992	 53.61	0	1039945..1040526	+	193	15794039	lolB	NMA1091	-	outer membrane lipoprotein LolB
993	 49.53	0	1040536..1041381	+	281	15794040	-	NMA1092	-	hypothetical protein
994	 52.74	0	1041803..1042786	+	327	15794041	prsA	NMA1093	-	ribose-phosphate pyrophosphokinase
995	 50.09	0	1042853..1043425	+	190	15794042	-	NMA1094	-	50S ribosomal protein L25/general stress protein Ctc
996	 48.55	0	1043550..1044719	-	389	15794043	-	NMA1095	-	D-alanyl-D-alanine carboxypeptidase
997	 53.57	0	1044867..1046393	+	508	15794044	ilvA	NMA1096	-	threonine dehydratase
998	 52.89	0	1046450..1047523	-	357	15794045	cysA	NMA1097	-	sulphate permease ATP-binding protein
999	 56.79	0	1047520..1048380	-	286	15794046	cysW	NMA1098	-	sulphate permease inner membrane protein
1000	 40.21	-1	1048445..1048633	-	62	15794047	-	NMA1099	-	hypothetical protein
1001	 57.71	0	1048758..1049594	-	278	15794048	cysU	NMA1100	-	sulphate permease inner membrane protein
1002	 57.06	0	1049885..1050217	+	110	15794049	-	NMA1101	-	hypothetical protein
1003	 38.04	-1	1050549..1051058	+	169	15794050	-	NMA1102	-	integral membrane protein
1004	 53.40	0	1052308..1052895	-	195	15794051	sodB	NMA1104	-	superoxide dismutase
1005	 55.37	0	1053058..1054464	+	468	15794052	dnaB	NMA1105	-	replicative DNA helicase
1006	 49.10	0	1054773..1055438	+	221	15794053	-	NMA1106	-	hypothetical protein
1007	 46.99	0	1055468..1056082	+	204	15794054	-	NMA1107	-	membrane protein
1008	 43.14	-1	1056079..1057077	+	332	15794055	-	NMA1108	-	membrane protein
1009	 46.30	0	1057056..1057649	+	197	15794056	-	NMA1109	-	membrane protein
1010	 42.13	-1	1057639..1058127	+	162	15794057	-	NMA1110	-	pilin
1011	 49.69	0	1059437..1059919	-	160	15794058	-	NMA1111	-	hypothetical protein
1012	 49.45	0	1060062..1060514	+	150	15794059	dut	NMA1112	-	deoxyuridine 5'-triphosphate nucleotidohydrolase
1013	 51.35	0	1060590..1061777	+	395	15794060	-	NMA1113	-	hypothetical protein
1014	 47.69	0	1062039..1062818	+	259	15794061	-	NMA1114	-	hypothetical protein
1015	 53.17	0	1063489..1064496	-	335	15794062	-	NMA1115	-	IS1106A3 transposase
1016	 54.85	0	1065658..1067883	-	741	15794063	icd	NMA1116	-	isocitrate dehydrogenase
1017	 52.53	0	1067916..1068113	+	65	15794064	-	NMA1117	-	hypothetical protein
1018	 46.95	0	1068316..1069431	+	371	15794065	lst	NMA1118	-	CMP-N-acetylneuraminate-beta-galactosamide-alpha- 2,3-sialyltransferase
1019	 55.34	0	1069595..1070053	-	152	15794066	-	NMA1119	-	C-type cytochrome
1020	 53.28	0	1070172..1070993	+	273	15794067	-	NMA1120	-	oxidoreductase
1021	 57.27	0	1071044..1071490	-	148	15794068	-	NMA1121	-	acyl-CoA hydrolase
1022	 52.84	0	1071772..1072704	+	310	15794069	pip	NMA1122	-	proline iminopeptidase
1023	 58.07	0	1072761..1073888	-	375	15794070	-	NMA1123	-	lipoprotein
1024	 60.39	+1	1073966..1074841	-	291	15794071	dapA	NMA1124	-	dihydrodipicolinate synthase
1025	 56.61	0	1075149..1076540	+	463	15794072	-	NMA1126	-	transmembrane transport protein
1026	 57.25	0	1076602..1077387	-	261	15794073	-	NMA1127	-	RNA methylase
1027	 58.90	+1	1077421..1077909	-	162	15794074	-	NMA1128	-	membrane protein
1028	 55.03	0	1077914..1078360	-	148	15794075	-	NMA1129	-	cytosine deaminase
1029	 57.75	0	1078637..1079578	-	313	15794076	miaA	NMA1130	-	tRNA delta(2)-isopentenylpyrophosphate transferase
1030	 45.63	0	1080050..1080358	+	102	15794077	-	NMA1131a	-	membrane protein
1031	 54.31	0	1080377..1081525	+	382	15794078	-	NMA1132	-	hypothetical protein
1032	 50.80	0	1081568..1082128	+	186	15794079	efp	NMA1133	-	elongation factor P
1033	 53.07	0	1082178..1083023	-	281	15794080	-	NMA1134	-	lipoprotein
1034	 53.78	0	1083140..1083721	-	193	15794081	-	NMA1135	-	hypothetical protein
1035	 52.72	0	1083718..1084857	-	379	15794082	metX	NMA1136	-	homoserine O-acetyltransferase
1036	 52.38	0	1085479..1085604	-	41	15794083	rpmJ	NMA1137	-	50S ribosomal protein L36
1037	 46.01	0	1085604..1085879	-	91	15794084	rpmE2	NMA1138	-	50S ribosomal protein L31 type B
1038	 52.79	0	1086078..1086956	+	292	15794085	metF	NMA1139	-	5,10-methylenetetrahydrofolate reductase
1039	 52.26	0	1087095..1089371	+	758	15794086	metE	NMA1140	-	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
1040	 48.24	0	1089650..1090387	+	245	15794087	-	NMA1141	-	redoxin
1041	 54.20	0	1090636..1092039	+	467	15794088	lpdA2	NMA1142	-	dihydrolipoamide dehydrogenase
1042	 48.68	0	1092318..1092695	+	125	15794089	sdhC	NMA1143	-	succinate dehydrogenase cytochrome B subunit
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.