IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
49	 59.44	+1	44988..45554	+	188	15793083	-	NMA0052	-	integral membrane protein
50	 54.35	0	45672..45947	-	91	15793084	-	NMA0053	-	hypothetical protein
51	 56.60	0	45987..48023	-	678	15793085	prlC	NMA0054	-	oligopeptidase A
52	 55.83	0	48111..49097	-	328	15793086	-	NMA0055	-	integral membrane protein
53	 56.17	0	49253..51643	+	796	15793087	gyrB	NMA0056	-	DNA gyrase subunit B
54	 60.68	+1	51962..53281	+	439	15793088	sdaA	NMA0057	-	L-serine dehydratase
55	 55.69	0	54687..56663	-	658	15793089	-	NMA0060	-	transmembrane transport protein
56	 63.45	+1	56812..57651	+	279	15793090	-	NMA0061	-	ferredoxin
57	 56.59	0	57851..58882	+	343	15793091	gapA	NMA0062	-	glyceraldehyde-3-phosphate dehydrogenase
58	 57.85	0	59138..59863	-	241	15793092	aat	NMA0063	-	leucyl/phenylalanyl-tRNA--protein transferase
59	 51.95	0	59933..60367	-	144	15793093	fur	NMA0064	-	ferric uptake regulation protein
60	 57.41	0	60586..60963	+	125	15793094	-	NMA0065	-	lipoprotein
61	 61.23	+1	60973..61782	+	269	15793095	dapB	NMA0066	-	dihydrodipicolinate reductase
62	 36.33	-2	62042..62341	-	99	15793096	-	NMA0067	-	hypothetical protein
63	 33.33	-2	62455..62700	-	81	15793097	-	NMA0068	-	hypothetical protein
64	 58.53	0	62708..63862	-	384	15793098	lpxB	NMA0069	-	lipid-A-disaccharide synthase
65	 57.50	0	63928..64920	-	330	15793099	rluC	NMA0070	-	ribosomal large subunit pseudouridine synthase C
66	 59.28	+1	65414..68173	+	919	15793100	rne	NMA0071	-	ribonuclease E
67	 60.40	+1	68960..69949	-	329	15793101	pdxA	NMA0072	-	pyridoxal phosphate biosynthetic protein
68	 55.60	0	70109..71536	+	475	15793102	-	NMA0073	-	amino-acid transport protein
69	 57.55	0	71870..73756	+	628	15793103	gidA	NMA0074	-	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
70	 57.78	0	73825..74409	+	194	15793104	rnhB	NMA0075	-	ribonuclease HII
71	 59.17	+1	75357..76130	-	257	15793105	-	NMA0076	-	parA family protein
72	 56.89	0	76229..76852	-	207	15793106	gidB	NMA0077	-	glucose-inhibited division protein B
73	 60.29	+1	76948..77433	-	161	15793107	-	NMA0078	-	integral membrane protein
74	 61.79	+1	77843..78970	+	375	15793108	-	NMA0079	-	integral membrane protein
75	 54.12	0	79151..79708	+	185	15793109	frr	NMA0080	-	ribosome recycling factor
76	 54.48	0	79764..80510	+	248	15793110	uppS	NMA0081	-	undecaprenyl diphosphate synthase
77	 56.39	0	80513..81310	+	265	15793111	cdsA	NMA0082	-	phosphatidate cytidylyltransferase
78	 58.31	0	81366..82550	+	394	15793112	dxr	NMA0083	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase
79	 59.36	+1	82585..83925	+	446	15793113	-	NMA0084	-	integral membrane protein
80	 56.14	0	83982..86375	+	797	15793114	omp85	NMA0085	-	outer membrane protein OMP85
81	 53.29	0	86441..86941	+	166	15793115	-	NMA0086	-	hypothetical protein
82	 59.96	+1	86974..88017	+	347	15793116	lpxD	NMA0087	-	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
83	 57.56	0	88053..88502	+	149	15793117	fabZ	NMA0088	-	(3R)-hydroxymyristoyl-ACP dehydratase
84	 36.27	-2	88813..89493	+	226	15793118	-	NMA0089	-	hypothetical protein
85	 59.07	+1	89536..90312	+	258	15793119	lpxA	NMA0090	-	UDP-N-acetylglucosamine acyltransferase
86	 53.95	0	90669..92060	+	463	15793120	-	NMA0091	-	amino-acid transporter
87	 55.13	0	92139..93395	+	418	15793121	dadA	NMA0092	-	D-amino acid dehydrogenase small subunit
88	 54.44	0	93576..94385	+	269	15793122	-	NMA0093	-	zinc transporter ZupT
89	 55.00	0	94482..97319	+	945	15793123	valS	NMA0094	-	valyl-tRNA synthetase
90	 50.64	0	97474..97629	+	51	15793124	-	NMA0095	-	hypothetical protein
91	 50.77	0	97690..98079	-	129	15793125	-	NMA0096	-	hypothetical protein
92	 52.66	0	98653..99573	-	306	15793126	oxyR	NMA0098	-	hydrogen peroxide-inducible genes activator
93	 43.94	-1	99577..99840	-	87	15793127	minE	NMA0099	-	cell division topological specificity factor
94	 46.69	0	99844..100659	-	271	15793128	minD	NMA0100	-	septum site-determining protein
95	 45.10	0	100688..101401	-	237	15793129	minC	NMA0101	-	septum formation inhibitor
96	 46.34	0	101548..101916	-	122	15793130	rplQ	NMA0102	-	50S ribosomal protein L17
97	 42.45	-1	101940..102926	-	328	15793131	rpoA	NMA0103	-	DNA-directed RNA polymerase subunit alpha
98	 44.61	-1	102952..103572	-	206	15793132	rpsD	NMA0104	-	30S ribosomal protein S4
99	 44.95	0	103592..103987	-	131	15793133	rpsK	NMA0105	-	30S ribosomal protein S11
100	 46.56	0	104007..104369	-	120	15793134	rpsM	NMA0106	-	30S ribosomal protein S13
101	 38.60	-1	104435..104548	-	37	15793135	rpmJ	NMA0107	-	50S ribosomal protein L36
102	 37.90	-1	104569..104787	-	72	15793136	infA	NMA0108	-	translation initiation factor IF-1
103	 37.07	-2	104792..106102	-	436	15793137	secY	NMA0109	-	preprotein translocase subunit SecY
104	 43.22	-1	106114..106548	-	144	15793138	rplO	NMA0110	-	50S ribosomal protein L15
105	 41.40	-1	106550..106735	-	61	15793139	rpmD	NMA0111	-	50S ribosomal protein L30
106	 43.74	-1	106728..107246	-	172	15793140	rpsE	NMA0112	-	30S ribosomal protein S5
107	 43.79	-1	107265..107618	-	117	15793141	rplR	NMA0113	-	50S ribosomal protein L18
108	 41.01	-1	107632..108165	-	177	15793142	rplF	NMA0114	-	50S ribosomal protein L6
109	 39.19	-1	108179..108571	-	130	15793143	rpsH	NMA0115	-	30S ribosomal protein S8
110	 46.08	0	108587..108892	-	101	15793144	rpsN	NMA0116	-	30S ribosomal protein S14
111	 38.15	-1	108895..109434	-	179	15793145	rplE	NMA0117	-	50S ribosomal protein L5
112	 38.58	-1	109444..109767	-	107	15793146	rplX	NMA0118	-	50S ribosomal protein L24
113	 44.17	-1	109779..110147	-	122	15793147	rplN	NMA0119	-	50S ribosomal protein L14
114	 36.74	-2	110369..110632	-	87	15793148	rpsQ	NMA0120	-	30S ribosomal protein S17
115	 38.54	-1	110632..110823	-	63	15793149	rpmC	NMA0121	-	50S ribosomal protein L29
116	 46.28	0	110823..111239	-	138	15793150	rplP	NMA0122	-	50S ribosomal protein L16
117	 44.88	0	111223..111915	-	230	15793151	rpsC	NMA0123	-	30S ribosomal protein S3
118	 42.12	-1	111925..112254	-	109	15793152	rplV	NMA0124	-	50S ribosomal protein L22
119	 45.16	0	112263..112541	-	92	15793153	rpsS	NMA0125	-	30S ribosomal protein S19
120	 51.80	0	112548..113381	-	277	15793154	rplB	NMA0126	-	50S ribosomal protein L2
121	 43.30	-1	113387..113707	-	106	15793155	rplW	NMA0127	-	50S ribosomal protein L23
122	 46.54	0	113698..114318	-	206	15793156	rplD	NMA0128	-	50S ribosomal protein L4
123	 49.92	0	114318..114962	-	214	15793157	rplC	NMA0129	-	50S ribosomal protein L3
124	 48.10	0	115181..115864	-	227	15793158	-	NMA0131	-	hypothetical protein
125	 47.82	0	115873..116928	-	351	15793159	-	NMA0132	-	hypothetical protein
126	 41.76	-1	116903..117163	-	86	15793160	-	NMA0132A	-	hypothetical protein
127	 47.44	0	117216..117527	-	103	15793161	rpsJ	NMA0133	-	30S ribosomal protein S10
128	 52.57	0	117545..118729	-	394	15793162	tufA1	NMA0134	-	elongation factor Tu
129	 49.95	0	118817..120922	-	701	15793163	fusA	NMA0135	-	elongation factor G
130	 49.68	0	120941..121411	-	156	15793164	rpsG	NMA0136	-	30S ribosomal protein S7
131	 50.00	0	121529..121900	-	123	15793165	rpsL	NMA0137	-	30S ribosomal protein S12
132	 40.67	-1	122079..122228	-	49	15793166	-	NMA0138	-	hypothetical protein
133	 56.20	0	122225..122482	-	85	15793167	-	NMA0139	-	periplasmic protein
134	 48.00	0	122531..122680	-	49	15793168	-	NMA0140	-	hypothetical protein
135	 50.72	0	122773..126948	-	1391	15793169	rpoC	NMA0141	-	DNA-directed RNA polymerase subunit beta'
136	 50.25	0	127100..131278	-	1392	15793170	rpoB	NMA0142	-	DNA-directed RNA polymerase subunit beta
137	 43.82	-1	131469..131840	-	123	15793171	rplL	NMA0143	-	50S ribosomal protein L7/L12
138	 47.31	0	131898..132398	-	166	15793172	rplJ	NMA0144	-	50S ribosomal protein L10
139	 43.39	-1	132628..133323	-	231	15793173	rplA	NMA0145	-	50S ribosomal protein L1
140	 44.83	0	133323..133757	-	144	15793174	rplK	NMA0146	-	50S ribosomal protein L11
141	 44.13	-1	133858..134394	-	178	15793175	nusG	NMA0147	-	transcription antitermination protein NusG
142	 36.92	-2	134396..134674	-	92	15793176	secE	NMA0148	-	preprotein translocase subunit SecE
143	 52.83	0	134871..136055	-	394	15793177	tufA2	NMA0149	-	elongation factor Tu
144	 49.21	0	136472..136723	-	83	15793178	-	NMA0150	-	ferredoxin
145	 53.68	0	136846..137415	-	189	15793179	-	NMA0151	-	DNA methylase
146	 47.24	0	137504..137884	-	126	15793180	-	NMA0153	-	hypothetical protein
147	 33.88	-2	138003..138554	+	183	15793181	-	NMA0154	-	integral membrane protein
148	 44.68	-1	138574..139269	+	231	15793182	-	NMA0155	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.