IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
907	 53.14	0	962968..963795	+	275	15793954	-	NMA0997	-	amino acid permease substrate-binding protein
908	 52.44	0	963785..964501	+	238	15793955	-	NMA0999	-	amino acid permease integral membrane protein
909	 52.91	0	964511..965266	+	251	15793956	-	NMA1000	-	amino acid permease ATP-binding protein
910	 55.31	0	965286..966668	-	460	15793957	pgm	NMA1001	-	phosphoglucomutase
911	 51.18	0	966831..967340	-	169	15793958	ppiB	NMA1002	-	peptidyl-prolyl cis-trans isomerase B
912	 55.58	0	967459..968874	-	471	15793959	-	NMA1003	-	transmembrane transport protein
913	 55.09	0	969731..970309	-	192	15793960	pth	NMA1004	-	peptidyl-tRNA hydrolase
914	 55.20	0	970362..970640	-	92	15793961	-	NMA1005	-	hypothetical protein
915	 49.77	0	970633..971076	-	147	15793962	-	NMA1006	-	hypothetical protein
916	 55.89	0	971286..973253	-	655	15793963	ftsH	NMA1007	-	ATP-dependent zinc metallopeptidase
917	 53.62	0	973317..973937	-	206	15793964	ftsJ	NMA1008	-	cell division protein
918	 51.93	0	974047..974331	+	94	15793965	-	NMA1009	-	hypothetical protein
919	 56.48	0	974353..974460	-	35	15793966	-	NMA1010	-	hypothetical protein
920	 56.05	0	974499..975515	+	338	15793967	hemB	NMA1011	-	delta-aminolevulinic acid dehydratase
921	 52.68	0	975578..976735	-	385	15793968	-	NMA1012	-	carbon-sulphur lyase
922	 52.20	0	976927..977700	+	257	15793969	-	NMA1013	-	putative GTP cyclohydrolase
923	 50.57	0	977712..977885	+	57	15793970	-	NMA1014	-	hypothetical protein
924	 52.85	0	977900..978565	+	221	15793971	-	NMA1015	-	NAD(P)H-flavin oxidoreductase
925	 56.39	0	978620..979378	-	252	15793972	-	NMA1016	-	RNA-binding protein
926	 57.24	0	979403..980293	-	296	15793973	ppnK	NMA1017	-	inorganic polyphosphate/ATP-NAD kinase
927	 61.02	+1	980313..980879	-	188	15793974	-	NMA1018	-	hypothetical protein
928	 59.59	+1	980930..981706	-	258	15793975	-	NMA1019	-	hypothetical protein
929	 54.53	0	981761..982411	-	216	15793976	-	NMA1020	-	TetR family transcriptional regulator
930	 55.04	0	982423..983463	-	346	15793977	murB	NMA1021	-	UDP-N-acetylenolpyruvoylglucosamine reductase
931	 57.03	0	983641..985020	-	459	15793978	-	NMA1022	-	multidrug efflux protein
932	 59.11	+1	985355..986506	+	383	15793979	hisZ	NMA1023	-	ATP phosphoribosyltransferase regulatory subunit
933	 56.81	0	986609..987907	+	432	15793980	purA	NMA1024	-	adenylosuccinate synthetase
934	 43.68	-1	988026..988286	+	86	15793981	-	NMA1025	-	hypothetical protein
935	 41.55	-1	988319..988756	+	145	15793982	-	NMA1026	-	hypothetical protein
936	 40.88	-1	988770..989180	+	136	15793983	-	NMA1027	-	DNA-binding protein
937	 45.29	0	989297..989689	+	130	15793984	-	NMA1028	-	DNA-binding protein
938	 48.68	0	989750..989977	+	75	15793985	-	NMA1029	-	hypothetical protein
939	 50.79	0	989952..990455	+	167	15793986	-	NMA1030	-	hypothetical protein
940	 55.48	0	990756..991595	-	279	15793987	htpX	NMA1031	-	heat shock protein HtpX
941	 54.17	0	991810..992457	+	215	15793988	adk	NMA1032	-	adenylate kinase
942	 54.66	0	992983..993723	+	246	15793989	pyrF	NMA1033	-	orotidine 5'-phosphate decarboxylase
943	 56.58	0	993778..994749	+	323	15793990	rfaE	NMA1034	-	DP-heptose synthetase
944	 33.82	-2	994786..996021	+	411	15793991	nmgII	NMA1035	-	modification methylase
945	 31.55	-2	996023..997141	+	372	15793992	nmgI	NMA1036	-	type II restriction endonuclease
946	 50.45	0	997182..998186	+	334	15793993	rfaD	NMA1037	-	ADP-L-glycero-D-mannoheptose epimerase
947	 52.17	0	998259..999803	+	514	15793994	-	NMA1038	-	type I restriction-modification system protein
948	 52.23	0	999800..1000810	+	336	15793995	-	NMA1039	-	DNA-binding protein
949	 54.47	0	1005418..1007697	-	759	15793996	clpA	NMA1045	-	ATP-dependent protease ATP-binding protein
950	 50.96	0	1007701..1008012	-	103	15793997	-	NMA1046	-	hypothetical protein
951	 46.57	0	1008270..1008473	+	67	15793998	cspA	NMA1047	-	transcriptional regulator
952	 60.44	+1	1008771..1010102	-	443	15793999	-	NMA1048	-	hypothetical protein
953	 51.56	0	1010193..1010768	+	191	15794000	-	NMA1049	-	hypothetical protein
954	 52.94	0	1010815..1011528	+	237	15794001	-	NMA1051	-	hypothetical protein
955	 57.26	0	1011597..1013297	+	566	15794002	recJ	NMA1052	-	single-stranded-DNA-specific exonuclease
956	 55.65	0	1013598..1014959	+	453	15794003	pcnB	NMA1053	-	poly(A) polymerase
957	 50.46	0	1015129..1015455	+	108	15794004	-	NMA1054	-	periplasmic protein
958	 54.72	0	1015560..1016513	-	317	15794005	-	NMA1056	-	hypothetical protein
959	 51.95	0	1016652..1017344	-	230	15794006	-	NMA1057	-	glycosyl transferase
960	 54.11	0	1017161..1017853	-	230	15794007	-	NMA1058	-	hypothetical protein
961	 51.21	0	1018045..1018749	+	234	15794008	-	NMA1059	-	periplasmic protein
962	 53.97	0	1018813..1019379	-	188	15794009	dcd	NMA1060	-	deoxycytidine triphosphate deaminase
963	 50.84	0	1019445..1019861	-	138	15794010	-	NMA1061	-	periplasmic protein
964	 52.44	0	1019913..1020812	-	299	15794011	rdgC	NMA1062	-	recombination associated protein
965	 53.09	0	1020843..1022300	-	485	15794012	engA	NMA1063	-	GTP-binding protein EngA
966	 51.43	0	1022454..1023083	-	209	15794013	-	NMA1064	-	membrane protein
967	 52.24	0	1023084..1024379	-	431	15794014	hisS	NMA1065	-	histidyl-tRNA synthetase
968	 46.42	0	1024473..1025129	-	218	15794015	-	NMA1066	-	periplasmic protein
969	 41.67	-1	1025187..1025378	-	63	15794016	-	NMA1067	-	hypothetical protein
970	 27.93	-2	1025411..1025947	-	178	15794017	-	NMA1068	-	hypothetical protein
971	 42.79	-1	1026115..1026315	-	66	15794018	-	NMA1070	-	hypothetical protein
972	 31.19	-2	1026430..1026849	-	139	15794019	-	NMA1071	-	hypothetical protein
973	 35.52	-2	1026907..1027272	-	121	15794020	-	NMA1072	-	hypothetical protein
974	 47.99	0	1027254..1027799	-	181	15794021	-	NMA1073	-	hypothetical protein
975	 26.37	-2	1027962..1028234	-	90	15794022	-	NMA1074	-	membrane protein
976	 44.44	-1	1028303..1028473	-	56	15794023	-	NMA1075	-	hypothetical protein
977	 35.25	-2	1028503..1028763	+	86	15794024	-	NMA1076	-	hypothetical protein
978	 28.51	-2	1029110..1029358	-	82	15794025	-	NMA1077	-	hypothetical protein
979	 46.61	0	1029404..1029772	-	122	15794026	-	NMA1078	-	hypothetical protein
980	 34.15	-2	1029914..1030159	-	81	15794027	-	NMA1079	-	hypothetical protein
981	 30.77	-2	1030388..1030504	-	38	15794028	-	NMA1080	-	hypothetical protein
982	 26.39	-2	1030563..1030850	-	95	15794029	-	NMA1081	-	membrane protein
983	 24.46	-2	1031157..1031528	-	123	15794030	-	NMA1082	-	hypothetical protein
984	 44.82	0	1031662..1032105	-	147	15794031	-	NMA1083	-	periplasmic protein
985	 52.64	0	1032148..1033017	-	289	15794032	-	NMA1084	-	periplasmic protein
986	 52.16	0	1033181..1034104	+	307	15794033	-	NMA1085	-	hypothetical protein
987	 57.48	0	1034182..1034823	-	213	15794034	-	NMA1086	-	hypothetical protein
988	 53.91	0	1034878..1035669	-	263	15794035	-	NMA1087	-	spermidine synthase
989	 56.44	0	1036052..1036843	+	263	15794036	panB	NMA1088	-	3-methyl-2-oxobutanoate hydroxymethyltransferase
990	 53.88	0	1036966..1037802	+	278	15794037	panC	NMA1089	-	pantoate--beta-alanine ligase
991	 55.57	0	1037967..1039805	+	612	15794038	-	NMA1090	-	periplasmic protein
992	 53.61	0	1039945..1040526	+	193	15794039	lolB	NMA1091	-	outer membrane lipoprotein LolB
993	 49.53	0	1040536..1041381	+	281	15794040	-	NMA1092	-	hypothetical protein
994	 52.74	0	1041803..1042786	+	327	15794041	prsA	NMA1093	-	ribose-phosphate pyrophosphokinase
995	 50.09	0	1042853..1043425	+	190	15794042	-	NMA1094	-	50S ribosomal protein L25/general stress protein Ctc
996	 48.55	0	1043550..1044719	-	389	15794043	-	NMA1095	-	D-alanyl-D-alanine carboxypeptidase
997	 53.57	0	1044867..1046393	+	508	15794044	ilvA	NMA1096	-	threonine dehydratase
998	 52.89	0	1046450..1047523	-	357	15794045	cysA	NMA1097	-	sulphate permease ATP-binding protein
999	 56.79	0	1047520..1048380	-	286	15794046	cysW	NMA1098	-	sulphate permease inner membrane protein
1000	 40.21	-1	1048445..1048633	-	62	15794047	-	NMA1099	-	hypothetical protein
1001	 57.71	0	1048758..1049594	-	278	15794048	cysU	NMA1100	-	sulphate permease inner membrane protein
1002	 57.06	0	1049885..1050217	+	110	15794049	-	NMA1101	-	hypothetical protein
1003	 38.04	-1	1050549..1051058	+	169	15794050	-	NMA1102	-	integral membrane protein
1004	 53.40	0	1052308..1052895	-	195	15794051	sodB	NMA1104	-	superoxide dismutase
1005	 55.37	0	1053058..1054464	+	468	15794052	dnaB	NMA1105	-	replicative DNA helicase
1006	 49.10	0	1054773..1055438	+	221	15794053	-	NMA1106	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.