IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
822	 52.01	0	871997..872692	+	231	15793869	-	NMA0903	-	hypothetical protein
823	 58.52	0	872877..874079	+	400	15793870	trpB	NMA0904	-	tryptophan synthase subunit beta
824	 47.14	0	874258..879579	-	1773	15793871	iga	NMA0905	-	IgA1 protease
825	 60.16	+1	881651..883726	+	691	15793872	comA	NMA0906	-	competence protein
826	 54.35	0	883784..884587	-	267	15793873	comL	NMA0907	-	competence lipoprotein
827	 55.29	0	884586..885710	+	374	15793874	rluD	NMA0908	-	ribosomal large subunit pseudouridine synthase D
828	 53.80	0	885863..886810	-	315	15793875	-	NMA0909	-	transmembrane transport protein
829	 60.00	+1	887369..888148	+	259	15793876	-	NMA0911	-	hypothetical protein
830	 57.08	0	888200..888679	+	159	15793877	-	NMA0912	-	lipoprotein
831	 58.76	0	888681..889679	+	332	15793878	holA	NMA0913	-	DNA polymerase III subunit delta
832	 53.33	0	889800..890219	+	139	15793879	-	NMA0914	-	membrane protein
833	 53.22	0	890297..890809	+	170	15793880	-	NMA0915	-	membrane protein
834	 50.96	0	890893..891777	-	294	15793881	-	NMA0916	-	hypothetical protein
835	 55.21	0	892264..893136	-	290	15793882	rpoH	NMA0917	-	RNA polymerase factor sigma-32
836	 56.01	0	893391..894929	-	512	15793883	lnt	NMA0918	-	apolipoprotein N-acyltransferase
837	 53.05	0	897012..897503	-	163	15793884	-	NMA0925	-	cytochrome C
838	 40.74	-1	897514..897621	-	35	15793885	-	NMA0926	-	hypothetical protein
839	 55.89	0	897694..898704	-	336	15793886	hemH	NMA0927	-	ferrochelatase
840	 53.14	0	898786..899901	-	371	15793887	tgt	NMA0928	-	queuine tRNA-ribosyltransferase
841	 48.64	0	900210..902123	+	637	15793888	thrS	NMA0929	-	threonyl-tRNA synthetase
842	 48.08	0	902141..902662	+	173	15793889	infC	NMA0930	-	translation initiation factor IF-3
843	 44.44	-1	902809..903006	+	65	15793890	rpmI	NMA0931	-	50S ribosomal protein L35
844	 51.39	0	903019..903378	+	119	15793891	rplT	NMA0932	-	50S ribosomal protein L20
845	 51.06	0	903724..904716	+	330	15793892	pheS	NMA0933	-	phenylalanyl-tRNA synthetase subunit alpha
846	 33.62	-2	904893..905957	+	354	15793893	-	NMA0935	-	hypothetical protein
847	 30.83	-2	905964..906482	+	172	15793894	-	NMA0936	-	hypothetical protein
848	 55.58	0	906518..908881	+	787	15793895	pheT	NMA0937	-	phenylalanyl-tRNA synthetase subunit beta
849	 48.18	0	908955..909257	+	100	15793896	himA	NMA0938	-	integration host factor alpha-subunit
850	 52.58	0	909259..909549	+	96	15793897	-	NMA0939	-	hypothetical protein
851	 52.67	0	909879..910364	+	161	15793898	fxsA	NMA0940	-	FxsA
852	 46.25	0	910624..910863	+	79	15793899	-	NMA0941	-	hypothetical protein
853	 54.07	0	911076..912377	+	433	15793900	bioA	NMA0942	-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase
854	 53.70	0	912374..913021	+	215	15793901	bioD	NMA0943	-	dithiobiotin synthetase
855	 56.81	0	913036..913512	+	158	15793902	-	NMA0944	-	hypothetical protein
856	 52.97	0	913542..914432	+	296	15793903	ubiA	NMA0945	-	4-hydroxybenzoate octaprenyltransferase
857	 53.11	0	914617..915066	+	149	15793904	-	NMA0946	-	regulatory protein
858	 52.96	0	915070..916032	+	320	15793905	-	NMA0947	-	HPr kinase/phosphorylase
859	 52.98	0	916013..916867	+	284	15793906	-	NMA0948	-	hypothetical protein
860	 54.88	0	916948..917889	+	313	15793907	rbgA	NMA0950	-	ribosomal biogenesis GTPase
861	 56.72	0	917990..918592	+	200	15793908	-	NMA0951	-	hypothetical protein
862	 52.27	0	918776..920449	+	557	15793909	recN	NMA0952	-	DNA repair protein
863	 41.11	-1	921481..921570	+	29	15793910	-	NMA0953	-	hypothetical protein
864	 58.40	0	921567..923186	-	539	15793911	-	NMA0954	-	hypothetical protein
865	 49.36	0	923282..923674	+	130	15793912	-	NMA0955	-	hypothetical protein
866	 51.90	0	923717..924454	+	245	15793913	ubiE	NMA0956	-	ubiquinone/menaquinone biosynthesis methyltransferase
867	 50.83	0	924674..925153	+	159	15793914	-	NMA0957	-	hypothetical protein
868	 54.75	0	925280..925774	-	164	15793915	folK	NMA0958	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine- pyrophosphokinase
869	 48.53	0	925784..926158	-	124	15793916	-	NMA0959	-	regulator
870	 53.44	0	926212..926778	-	188	15793917	-	NMA0960	-	hypothetical protein
871	 48.64	0	926863..927156	-	97	15793918	hfq	NMA0961	-	regulator
872	 53.35	0	927285..928223	-	312	15793919	-	NMA0962	-	D-alanyl-D-alanine-endopeptidase
873	 49.80	0	928481..928984	+	167	15793920	-	NMA0963	-	hypothetical protein
874	 54.91	0	929036..929911	+	291	15793921	xerD	NMA0964	-	integrase/recombinase
875	 57.71	0	930083..930283	+	66	15793922	-	NMA0965	-	ferredoxin
876	 43.59	-1	930449..930682	+	77	15793923	-	NMA0966	-	thioredoxin
877	 55.44	0	931156..932019	-	287	15793924	rfbD	NMA0967	-	dTDP-4-dehydrorhamnose reductase
878	 48.84	0	932217..933080	+	287	15793925	hemH	NMA0968	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
879	 54.50	0	933317..935437	+	706	15793926	pnp	NMA0969	-	polynucleotide phosphorylase/polyadenylase
880	 52.02	0	935510..936178	-	222	15793927	-	NMA0970	-	hypothetical protein
881	 50.17	0	936192..936488	-	98	15793928	-	NMA0971	-	lipoprotein
882	 55.52	0	936625..937476	+	283	15793929	dapF	NMA0972	-	diaminopimelate epimerase
883	 51.98	0	937473..938078	+	201	15793930	-	NMA0973	-	integral membrane protein
884	 53.27	0	938272..939204	+	310	15793931	cysK	NMA0974	-	cysteine synthase
885	 54.84	0	939791..940669	+	292	15793932	-	NMA0975	-	integral membrane protein
886	 50.06	0	940934..941812	-	292	15793933	lepB	NMA0976	-	signal peptidase I
887	 52.01	0	942096..943889	-	597	15793934	lepA	NMA0977	-	GTP-binding protein LepA
888	 54.42	0	944034..944735	-	233	15793935	pfs	NMA0978	-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
889	 53.55	0	944921..946033	+	370	15793936	pilT2	NMA0979	-	pilus retraction protein
890	 53.07	0	946067..947044	+	325	15793937	holB	NMA0980	-	DNA polymerase III subunit delta'
891	 50.43	0	947048..947398	+	116	15793938	-	NMA0981	-	pilus biogenesis protein
892	 53.33	0	947403..948182	+	259	15793939	-	NMA0982	-	hypothetical protein
893	 54.59	0	948231..948437	+	68	15793940	-	NMA0983	-	haemolysin
894	 52.24	0	948538..948849	+	103	15793941	-	NMA0984	-	hypothetical protein
895	 56.30	0	948955..949581	+	208	15793942	upp	NMA0985	-	uracil phosphoribosyltransferase
896	 51.40	0	949604..949924	+	106	15793943	-	NMA0986	-	hypothetical protein
897	 49.88	0	950175..950597	+	140	15793944	-	NMA0987	-	secreted protein
898	 54.93	0	950636..951376	+	246	15793945	hemD	NMA0988	-	uroporphyrinogen-III synthase
899	 54.59	0	951451..952725	+	424	15793946	-	NMA0989	-	hypothetical protein
900	 54.84	0	952722..953939	+	405	15793947	-	NMA0990	-	hypothetical protein
901	 57.00	0	954014..955078	+	354	15793948	hemE	NMA0991	-	uroporphyrinogen decarboxylase
902	 58.62	0	955264..956643	+	459	15793949	radA	NMA0992	-	DNA repair protein RadA
903	 55.62	0	956919..957398	-	159	15793950	-	NMA0993	-	periplasmic protein
904	 56.11	0	957530..957889	-	119	15793951	-	NMA0994	-	periplasmic protein
905	 58.01	0	957928..961542	-	1204	15793952	recB	NMA0995	-	exodeoxyribonuclease V beta chain
906	 58.75	0	961775..962683	-	302	15793953	-	NMA0996	-	hypothetical protein
907	 53.14	0	962968..963795	+	275	15793954	-	NMA0997	-	amino acid permease substrate-binding protein
908	 52.44	0	963785..964501	+	238	15793955	-	NMA0999	-	amino acid permease integral membrane protein
909	 52.91	0	964511..965266	+	251	15793956	-	NMA1000	-	amino acid permease ATP-binding protein
910	 55.31	0	965286..966668	-	460	15793957	pgm	NMA1001	-	phosphoglucomutase
911	 51.18	0	966831..967340	-	169	15793958	ppiB	NMA1002	-	peptidyl-prolyl cis-trans isomerase B
912	 55.58	0	967459..968874	-	471	15793959	-	NMA1003	-	transmembrane transport protein
913	 55.09	0	969731..970309	-	192	15793960	pth	NMA1004	-	peptidyl-tRNA hydrolase
914	 55.20	0	970362..970640	-	92	15793961	-	NMA1005	-	hypothetical protein
915	 49.77	0	970633..971076	-	147	15793962	-	NMA1006	-	hypothetical protein
916	 55.89	0	971286..973253	-	655	15793963	ftsH	NMA1007	-	ATP-dependent zinc metallopeptidase
917	 53.62	0	973317..973937	-	206	15793964	ftsJ	NMA1008	-	cell division protein
918	 51.93	0	974047..974331	+	94	15793965	-	NMA1009	-	hypothetical protein
919	 56.48	0	974353..974460	-	35	15793966	-	NMA1010	-	hypothetical protein
920	 56.05	0	974499..975515	+	338	15793967	hemB	NMA1011	-	delta-aminolevulinic acid dehydratase
921	 52.68	0	975578..976735	-	385	15793968	-	NMA1012	-	carbon-sulphur lyase
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.