IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
781	 30.77	-2	835597..835986	+	129	15793828	-	NMA0858	-	hypothetical protein
782	 59.12	+1	836027..837484	-	485	15793829	-	NMA0859	-	transmembrane potassium transporter
783	 57.52	0	837499..838329	-	276	15793830	apaH	NMA0860	-	diadenosine tetraphosphatase
784	 62.05	+1	838407..838796	-	129	15793831	-	NMA0861	-	hypothetical protein
785	 58.48	0	838932..839456	-	174	15793832	nspA	NMA0862	-	outer membrane protein
786	 55.50	0	840042..841241	-	399	15793833	-	NMA0864	-	coproporphyrinogen III oxidase
787	 58.16	0	841274..843799	-	841	15793834	ligA	NMA0865	-	DNA ligase
788	 56.33	0	843947..845233	-	428	15793835	-	NMA0866	-	hypothetical protein
789	 55.85	0	845427..845999	-	190	15793836	ampD	NMA0867	-	N-acetyl-anhydromuranmyl-L-alanine amidase
790	 54.32	0	846083..847078	+	331	15793837	-	NMA0868	-	periplasmic protein
791	 56.20	0	847138..847758	+	206	15793838	tdk	NMA0869	-	thymidylate kinase
792	 54.88	0	847980..849260	+	426	15793839	maeA	NMA0870	-	malate oxidoreductase
793	 49.33	0	849527..849676	+	49	15793840	-	NMA0871	-	hypothetical protein
794	 56.71	0	849807..850841	+	344	15793841	lpxK	NMA0872	-	tetraacyldisaccharide 4'-kinase
795	 47.96	0	851041..851628	+	195	15793842	-	NMA0873	-	periplasmic protein
796	 48.09	0	851697..851879	+	60	15793843	-	NMA0874	-	hypothetical protein
797	 59.97	+1	851876..852637	+	253	15793844	kdsB	NMA0875	-	3-deoxy-manno-octulosonate cytidylyltransferase
798	 50.50	0	852660..853061	+	133	15793845	-	NMA0876	-	hypothetical protein
799	 50.30	0	853115..853279	+	54	15793846	-	NMA0877	-	hypothetical protein
800	 34.19	-2	853257..853373	+	38	15793847	-	NMA0878	-	hypothetical protein
801	 53.82	0	853953..854738	+	261	15793848	trpA	NMA0879	-	tryptophan synthase subunit alpha
802	 54.30	0	854775..855647	+	290	15793849	accD	NMA0880	-	acetyl-CoA carboxylase subunit beta
803	 58.99	+1	855707..856318	-	203	15793850	cnp1	NMA0881	-	periplasmic protein
804	 55.11	0	856427..856651	+	74	15793851	-	NMA0882	-	hypothetical protein
805	 54.55	0	856664..857257	+	197	15793852	-	NMA0883	-	lipoprotein
806	 59.23	+1	857317..858351	+	344	15793853	pyrC	NMA0884	-	dihydroorotase
807	 58.22	0	858717..859142	-	141	15793854	nusB	NMA0885	-	transcription antitermination protein NusB
808	 55.14	0	859220..859696	-	158	15793855	ribH	NMA0886	-	riboflavin synthase subunit beta
809	 58.33	0	859743..860066	-	107	15793856	-	NMA0887	-	hypothetical protein
810	 56.25	0	860233..860952	+	239	15793857	rnc	NMA0888	-	ribonuclease III
811	 52.38	0	860999..861922	+	307	15793858	era	NMA0889	-	GTP-binding protein Era
812	 58.69	0	863413..864039	-	208	15793859	trpF	NMA0890	-	N-(5'-phosphoribosyl)anthranilate isomerase
813	 53.46	0	864098..864589	-	163	15793860	greB	NMA0891	-	transcription elongation factor GreB
814	 58.06	0	864689..866233	-	514	15793861	purF	NMA0892	-	amidophosphoribosyltransferase
815	 55.82	0	866442..866939	-	165	15793862	-	NMA0894	-	membrane protein
816	 53.45	0	866932..867930	-	332	15793863	tpc	NMA0895	-	tetrapac protein
817	 56.24	0	867943..869217	-	424	15793864	folC	NMA0896	-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase
818	 55.56	0	869249..869689	-	146	15793865	folI	NMA0897	-	transcriptional regulator
819	 50.93	0	869694..870068	-	124	15793866	-	NMA0899	-	hypothetical protein
820	 51.85	0	870126..870854	-	242	15793867	-	NMA0900	-	amino acid permease ATP-binding protein
821	 53.72	0	871027..871806	-	259	15793868	ksgA	NMA0902	-	dimethyladenosine transferase
822	 52.01	0	871997..872692	+	231	15793869	-	NMA0903	-	hypothetical protein
823	 58.52	0	872877..874079	+	400	15793870	trpB	NMA0904	-	tryptophan synthase subunit beta
824	 47.14	0	874258..879579	-	1773	15793871	iga	NMA0905	-	IgA1 protease
825	 60.16	+1	881651..883726	+	691	15793872	comA	NMA0906	-	competence protein
826	 54.35	0	883784..884587	-	267	15793873	comL	NMA0907	-	competence lipoprotein
827	 55.29	0	884586..885710	+	374	15793874	rluD	NMA0908	-	ribosomal large subunit pseudouridine synthase D
828	 53.80	0	885863..886810	-	315	15793875	-	NMA0909	-	transmembrane transport protein
829	 60.00	+1	887369..888148	+	259	15793876	-	NMA0911	-	hypothetical protein
830	 57.08	0	888200..888679	+	159	15793877	-	NMA0912	-	lipoprotein
831	 58.76	0	888681..889679	+	332	15793878	holA	NMA0913	-	DNA polymerase III subunit delta
832	 53.33	0	889800..890219	+	139	15793879	-	NMA0914	-	membrane protein
833	 53.22	0	890297..890809	+	170	15793880	-	NMA0915	-	membrane protein
834	 50.96	0	890893..891777	-	294	15793881	-	NMA0916	-	hypothetical protein
835	 55.21	0	892264..893136	-	290	15793882	rpoH	NMA0917	-	RNA polymerase factor sigma-32
836	 56.01	0	893391..894929	-	512	15793883	lnt	NMA0918	-	apolipoprotein N-acyltransferase
837	 53.05	0	897012..897503	-	163	15793884	-	NMA0925	-	cytochrome C
838	 40.74	-1	897514..897621	-	35	15793885	-	NMA0926	-	hypothetical protein
839	 55.89	0	897694..898704	-	336	15793886	hemH	NMA0927	-	ferrochelatase
840	 53.14	0	898786..899901	-	371	15793887	tgt	NMA0928	-	queuine tRNA-ribosyltransferase
841	 48.64	0	900210..902123	+	637	15793888	thrS	NMA0929	-	threonyl-tRNA synthetase
842	 48.08	0	902141..902662	+	173	15793889	infC	NMA0930	-	translation initiation factor IF-3
843	 44.44	-1	902809..903006	+	65	15793890	rpmI	NMA0931	-	50S ribosomal protein L35
844	 51.39	0	903019..903378	+	119	15793891	rplT	NMA0932	-	50S ribosomal protein L20
845	 51.06	0	903724..904716	+	330	15793892	pheS	NMA0933	-	phenylalanyl-tRNA synthetase subunit alpha
846	 33.62	-2	904893..905957	+	354	15793893	-	NMA0935	-	hypothetical protein
847	 30.83	-2	905964..906482	+	172	15793894	-	NMA0936	-	hypothetical protein
848	 55.58	0	906518..908881	+	787	15793895	pheT	NMA0937	-	phenylalanyl-tRNA synthetase subunit beta
849	 48.18	0	908955..909257	+	100	15793896	himA	NMA0938	-	integration host factor alpha-subunit
850	 52.58	0	909259..909549	+	96	15793897	-	NMA0939	-	hypothetical protein
851	 52.67	0	909879..910364	+	161	15793898	fxsA	NMA0940	-	FxsA
852	 46.25	0	910624..910863	+	79	15793899	-	NMA0941	-	hypothetical protein
853	 54.07	0	911076..912377	+	433	15793900	bioA	NMA0942	-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase
854	 53.70	0	912374..913021	+	215	15793901	bioD	NMA0943	-	dithiobiotin synthetase
855	 56.81	0	913036..913512	+	158	15793902	-	NMA0944	-	hypothetical protein
856	 52.97	0	913542..914432	+	296	15793903	ubiA	NMA0945	-	4-hydroxybenzoate octaprenyltransferase
857	 53.11	0	914617..915066	+	149	15793904	-	NMA0946	-	regulatory protein
858	 52.96	0	915070..916032	+	320	15793905	-	NMA0947	-	HPr kinase/phosphorylase
859	 52.98	0	916013..916867	+	284	15793906	-	NMA0948	-	hypothetical protein
860	 54.88	0	916948..917889	+	313	15793907	rbgA	NMA0950	-	ribosomal biogenesis GTPase
861	 56.72	0	917990..918592	+	200	15793908	-	NMA0951	-	hypothetical protein
862	 52.27	0	918776..920449	+	557	15793909	recN	NMA0952	-	DNA repair protein
863	 41.11	-1	921481..921570	+	29	15793910	-	NMA0953	-	hypothetical protein
864	 58.40	0	921567..923186	-	539	15793911	-	NMA0954	-	hypothetical protein
865	 49.36	0	923282..923674	+	130	15793912	-	NMA0955	-	hypothetical protein
866	 51.90	0	923717..924454	+	245	15793913	ubiE	NMA0956	-	ubiquinone/menaquinone biosynthesis methyltransferase
867	 50.83	0	924674..925153	+	159	15793914	-	NMA0957	-	hypothetical protein
868	 54.75	0	925280..925774	-	164	15793915	folK	NMA0958	-	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine- pyrophosphokinase
869	 48.53	0	925784..926158	-	124	15793916	-	NMA0959	-	regulator
870	 53.44	0	926212..926778	-	188	15793917	-	NMA0960	-	hypothetical protein
871	 48.64	0	926863..927156	-	97	15793918	hfq	NMA0961	-	regulator
872	 53.35	0	927285..928223	-	312	15793919	-	NMA0962	-	D-alanyl-D-alanine-endopeptidase
873	 49.80	0	928481..928984	+	167	15793920	-	NMA0963	-	hypothetical protein
874	 54.91	0	929036..929911	+	291	15793921	xerD	NMA0964	-	integrase/recombinase
875	 57.71	0	930083..930283	+	66	15793922	-	NMA0965	-	ferredoxin
876	 43.59	-1	930449..930682	+	77	15793923	-	NMA0966	-	thioredoxin
877	 55.44	0	931156..932019	-	287	15793924	rfbD	NMA0967	-	dTDP-4-dehydrorhamnose reductase
878	 48.84	0	932217..933080	+	287	15793925	hemH	NMA0968	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
879	 54.50	0	933317..935437	+	706	15793926	pnp	NMA0969	-	polynucleotide phosphorylase/polyadenylase
880	 52.02	0	935510..936178	-	222	15793927	-	NMA0970	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.