IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
727	 56.03	0	784567..786381	-	604	15793774	-	NMA0800	-	hypothetical protein
728	 51.13	0	786371..786724	-	117	15793775	-	NMA0801	-	hypothetical protein
729	 52.31	0	786740..787345	-	201	15793776	-	NMA0802	-	hypothetical protein
730	 51.62	0	787398..788168	-	256	15793777	tatC	NMA0803	-	sec-independent protein translocase component
731	 56.04	0	788182..788868	-	228	15793778	-	NMA0804	-	sec-independent protein translocase component
732	 46.57	0	788872..789075	-	67	15793779	-	NMA0805	-	sec-independent protein translocase component
733	 51.54	0	789122..789445	-	107	15793780	-	NMA0806	-	nucleotide-binding protein
734	 50.62	0	789517..789840	-	107	15793781	hisE	NMA0807	-	phosphoribosyl-ATP cyclohydrolase
735	 55.59	0	789981..791045	-	354	15793782	-	NMA0808	-	zinc-binding alcohol dehydrogenase
736	 58.38	0	791408..792565	-	385	15793783	-	NMA0810	-	hypothetical protein
737	 46.82	0	792645..792911	+	88	15793784	-	NMA0811	-	hypothetical protein
738	 53.69	0	793120..794976	+	618	15793785	secD	NMA0812	-	preprotein translocase subunit SecD
739	 48.82	0	794980..795915	+	311	15793786	secF	NMA0813	-	preprotein translocase subunit SecF
740	 45.76	0	795923..796099	+	58	15793787	-	NMA0814	-	hypothetical protein
741	 54.81	0	796138..796407	+	89	15793788	rpsO	NMA0815	-	30S ribosomal protein S15
742	 50.13	0	796788..797912	+	374	15793789	-	NMA0816	-	polyamine permease ATP-binding protein
743	 49.07	0	797928..798893	+	321	15793790	-	NMA0817	-	polyamine permease inner membrane protein
744	 50.23	0	798893..799780	+	295	15793791	-	NMA0818	-	polyamine permease inner membrane protein
745	 51.08	0	799906..801201	+	431	15793792	-	NMA0819	-	oxidoreductase
746	 57.47	0	801446..802750	-	434	15793793	amtB	NMA0820	-	ammonium transporter
747	 59.90	+1	802770..802961	+	63	15793794	-	NMA0821	-	hypothetical protein
748	 61.44	+1	805021..805173	+	50	15793795	-	NMA0824	-	hypothetical protein
749	 54.37	0	805239..806498	-	419	15793796	rho	NMA0825	-	transcription termination factor Rho
750	 54.93	0	806718..809102	-	794	15793797	ppsA	NMA0826	-	phosphoenolpyruvate synthase
751	 53.28	0	809514..810335	+	273	15793798	-	NMA0827	-	hypothetical protein
752	 61.69	+1	810575..811237	-	220	15793799	-	NMA0828	-	phosphatase
753	 56.52	0	811250..812077	-	275	15793800	-	NMA0829	-	hypothetical protein
754	 56.41	0	812507..813130	+	207	15793801	-	NMA0830	-	periplasmic carrier protein
755	 55.44	0	813403..814542	+	379	15793802	-	NMA0831	-	polyamine permease substrate-binding protein
756	 31.34	-2	814675..815826	+	383	15793803	-	NMA0832	-	glycosyl transferase
757	 58.95	+1	815867..816397	+	176	15793804	-	NMA0833	-	hypothetical protein
758	 56.94	0	816581..816652	-	23	15793805	-	NMA0835	-	peptide chain release factor 3 remnant
759	 54.76	0	816773..818368	-	531	15793806	prfC	NMA0836	-	peptide chain release factor 3
760	 54.29	0	818475..818870	-	131	15793807	hisI	NMA0837	-	phosphoribosyl-AMP cyclohydrolase
761	 61.46	+1	818901..819668	-	255	15793808	hisF	NMA0838	-	imidazole glycerol phosphate synthase subunit HisF
762	 59.21	+1	819681..820418	-	245	15793809	hisA	NMA0839	-	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
763	 54.93	0	820451..821089	-	212	15793810	hisH	NMA0840	-	imidazole glycerol phosphate synthase subunit HisH
764	 59.61	+1	821220..822722	-	500	15793811	-	NMA0841	-	phosphate acyltransferase
765	 60.53	+1	822907..823965	-	352	15793812	fbpC	NMA0842	-	iron-uptake permease ATP-binding protein
766	 51.76	0	823986..825515	-	509	15793813	fbpB	NMA0843	-	iron-uptake permease inner membrane protein
767	 55.62	0	825571..826566	-	331	15793814	fbpA	NMA0844	-	major ferric iron binding protein
768	 47.30	0	826817..827038	-	73	15793815	-	NMA0845	-	hypothetical protein
769	 52.94	0	827032..827286	-	84	15793816	-	NMA0846	-	hypothetical protein
770	 57.30	0	827343..828719	-	458	15793817	argH	NMA0847	-	argininosuccinate lyase
771	 56.78	0	828738..829607	-	289	15793818	galU	NMA0848	-	UTP--glucose-1-phosphate uridylyltransferase
772	 55.67	0	829635..830234	-	199	15793819	-	NMA0849	-	putative deoxyribonucleotide triphosphate pyrophosphatase
773	 55.98	0	830227..830460	-	77	15793820	-	NMA0850	-	hypothetical protein
774	 53.37	0	830568..831101	-	177	15793821	ppa	NMA0851	-	inorganic pyrophosphatase
775	 56.86	0	831203..831661	-	152	15793822	ntpA	NMA0852	-	dATP pyrophosphohydrolase
776	 50.39	0	832260..833930	+	556	15793823	mafB3	NMA0853	-	adhesin
777	 25.51	-2	833927..834169	+	80	15793824	-	NMA0854	-	hypothetical protein
778	 41.87	-1	834247..834492	+	81	15793825	-	NMA0855	-	hypothetical protein
779	 37.18	-2	834495..834884	+	129	15793826	-	NMA0856	-	hypothetical protein
780	 32.89	-2	835000..835449	+	149	15793827	-	NMA0857	-	hypothetical protein
781	 30.77	-2	835597..835986	+	129	15793828	-	NMA0858	-	hypothetical protein
782	 59.12	+1	836027..837484	-	485	15793829	-	NMA0859	-	transmembrane potassium transporter
783	 57.52	0	837499..838329	-	276	15793830	apaH	NMA0860	-	diadenosine tetraphosphatase
784	 62.05	+1	838407..838796	-	129	15793831	-	NMA0861	-	hypothetical protein
785	 58.48	0	838932..839456	-	174	15793832	nspA	NMA0862	-	outer membrane protein
786	 55.50	0	840042..841241	-	399	15793833	-	NMA0864	-	coproporphyrinogen III oxidase
787	 58.16	0	841274..843799	-	841	15793834	ligA	NMA0865	-	DNA ligase
788	 56.33	0	843947..845233	-	428	15793835	-	NMA0866	-	hypothetical protein
789	 55.85	0	845427..845999	-	190	15793836	ampD	NMA0867	-	N-acetyl-anhydromuranmyl-L-alanine amidase
790	 54.32	0	846083..847078	+	331	15793837	-	NMA0868	-	periplasmic protein
791	 56.20	0	847138..847758	+	206	15793838	tdk	NMA0869	-	thymidylate kinase
792	 54.88	0	847980..849260	+	426	15793839	maeA	NMA0870	-	malate oxidoreductase
793	 49.33	0	849527..849676	+	49	15793840	-	NMA0871	-	hypothetical protein
794	 56.71	0	849807..850841	+	344	15793841	lpxK	NMA0872	-	tetraacyldisaccharide 4'-kinase
795	 47.96	0	851041..851628	+	195	15793842	-	NMA0873	-	periplasmic protein
796	 48.09	0	851697..851879	+	60	15793843	-	NMA0874	-	hypothetical protein
797	 59.97	+1	851876..852637	+	253	15793844	kdsB	NMA0875	-	3-deoxy-manno-octulosonate cytidylyltransferase
798	 50.50	0	852660..853061	+	133	15793845	-	NMA0876	-	hypothetical protein
799	 50.30	0	853115..853279	+	54	15793846	-	NMA0877	-	hypothetical protein
800	 34.19	-2	853257..853373	+	38	15793847	-	NMA0878	-	hypothetical protein
801	 53.82	0	853953..854738	+	261	15793848	trpA	NMA0879	-	tryptophan synthase subunit alpha
802	 54.30	0	854775..855647	+	290	15793849	accD	NMA0880	-	acetyl-CoA carboxylase subunit beta
803	 58.99	+1	855707..856318	-	203	15793850	cnp1	NMA0881	-	periplasmic protein
804	 55.11	0	856427..856651	+	74	15793851	-	NMA0882	-	hypothetical protein
805	 54.55	0	856664..857257	+	197	15793852	-	NMA0883	-	lipoprotein
806	 59.23	+1	857317..858351	+	344	15793853	pyrC	NMA0884	-	dihydroorotase
807	 58.22	0	858717..859142	-	141	15793854	nusB	NMA0885	-	transcription antitermination protein NusB
808	 55.14	0	859220..859696	-	158	15793855	ribH	NMA0886	-	riboflavin synthase subunit beta
809	 58.33	0	859743..860066	-	107	15793856	-	NMA0887	-	hypothetical protein
810	 56.25	0	860233..860952	+	239	15793857	rnc	NMA0888	-	ribonuclease III
811	 52.38	0	860999..861922	+	307	15793858	era	NMA0889	-	GTP-binding protein Era
812	 58.69	0	863413..864039	-	208	15793859	trpF	NMA0890	-	N-(5'-phosphoribosyl)anthranilate isomerase
813	 53.46	0	864098..864589	-	163	15793860	greB	NMA0891	-	transcription elongation factor GreB
814	 58.06	0	864689..866233	-	514	15793861	purF	NMA0892	-	amidophosphoribosyltransferase
815	 55.82	0	866442..866939	-	165	15793862	-	NMA0894	-	membrane protein
816	 53.45	0	866932..867930	-	332	15793863	tpc	NMA0895	-	tetrapac protein
817	 56.24	0	867943..869217	-	424	15793864	folC	NMA0896	-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase
818	 55.56	0	869249..869689	-	146	15793865	folI	NMA0897	-	transcriptional regulator
819	 50.93	0	869694..870068	-	124	15793866	-	NMA0899	-	hypothetical protein
820	 51.85	0	870126..870854	-	242	15793867	-	NMA0900	-	amino acid permease ATP-binding protein
821	 53.72	0	871027..871806	-	259	15793868	ksgA	NMA0902	-	dimethyladenosine transferase
822	 52.01	0	871997..872692	+	231	15793869	-	NMA0903	-	hypothetical protein
823	 58.52	0	872877..874079	+	400	15793870	trpB	NMA0904	-	tryptophan synthase subunit beta
824	 47.14	0	874258..879579	-	1773	15793871	iga	NMA0905	-	IgA1 protease
825	 60.16	+1	881651..883726	+	691	15793872	comA	NMA0906	-	competence protein
826	 54.35	0	883784..884587	-	267	15793873	comL	NMA0907	-	competence lipoprotein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.