IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
702	 42.02	-1	763535..764593	-	352	15793749	-	NMA0774	-	hypothetical protein
703	 40.28	-1	764596..764883	-	95	15793750	-	NMA0775	-	integral membrane protein
704	 43.63	-1	764885..766399	-	504	15793751	-	NMA0776	-	cell-surface protein
705	 29.08	-2	766341..766646	-	101	15793752	-	NMA0777	-	hypothetical protein
706	 42.75	-1	766775..767050	-	91	15793753	-	NMA0778	-	hypothetical protein
707	 47.49	0	767061..767279	-	72	15793754	-	NMA0779	-	integral membrane protein
708	 38.73	-1	767362..767565	-	67	15793755	-	NMA0780	-	hypothetical protein
709	 49.04	0	767583..767894	-	103	15793756	-	NMA0781	-	hypothetical protein
710	 46.96	0	767915..769264	-	449	15793757	-	NMA0782	-	phage replication protein
711	 41.20	-1	769261..769476	-	71	15793758	-	NMA0783	-	hypothetical protein
712	 29.12	-2	769762..770283	+	173	15793759	-	NMA0784	-	hypothetical protein
713	 34.22	-2	770333..770782	+	149	15793760	-	NMA0785	-	hypothetical protein
714	 21.30	-2	770816..771322	+	168	15793761	-	NMA0786	-	hypothetical protein
715	 46.16	0	771339..772406	+	355	15793762	-	NMA0787	-	hypothetical protein
716	 53.29	0	774834..775760	-	308	15793763	-	NMA0789	-	periplasmic binding protein
717	 58.22	0	775837..776712	-	291	15793764	-	NMA0790	-	ABC-transporter membrane protein
718	 53.44	0	776748..777503	-	251	15793765	-	NMA0791	-	ABC-transporter ATP-binding protein
719	 52.73	0	777791..778156	-	121	15793766	rplS	NMA0792	-	50S ribosomal protein L19
720	 53.07	0	778172..778921	-	249	15793767	trmD	NMA0793	-	tRNA (guanine-N1)-methyltransferase
721	 49.61	0	778921..779430	-	169	15793768	rimM	NMA0794	-	16S rRNA-processing protein
722	 56.10	0	779446..779691	-	81	15793769	rpsP	NMA0795	-	30S ribosomal protein S16
723	 57.97	0	779736..782162	-	808	15793770	-	NMA0796	-	hypothetical protein
724	 53.73	0	782280..783686	-	468	15793771	-	NMA0797	-	two-component system sensor kinase
725	 56.64	0	783700..784377	-	225	15793772	-	NMA0798	-	two-component system regulator
726	 45.33	0	784374..784523	-	49	15793773	-	NMA0799	-	hypothetical protein
727	 56.03	0	784567..786381	-	604	15793774	-	NMA0800	-	hypothetical protein
728	 51.13	0	786371..786724	-	117	15793775	-	NMA0801	-	hypothetical protein
729	 52.31	0	786740..787345	-	201	15793776	-	NMA0802	-	hypothetical protein
730	 51.62	0	787398..788168	-	256	15793777	tatC	NMA0803	-	sec-independent protein translocase component
731	 56.04	0	788182..788868	-	228	15793778	-	NMA0804	-	sec-independent protein translocase component
732	 46.57	0	788872..789075	-	67	15793779	-	NMA0805	-	sec-independent protein translocase component
733	 51.54	0	789122..789445	-	107	15793780	-	NMA0806	-	nucleotide-binding protein
734	 50.62	0	789517..789840	-	107	15793781	hisE	NMA0807	-	phosphoribosyl-ATP cyclohydrolase
735	 55.59	0	789981..791045	-	354	15793782	-	NMA0808	-	zinc-binding alcohol dehydrogenase
736	 58.38	0	791408..792565	-	385	15793783	-	NMA0810	-	hypothetical protein
737	 46.82	0	792645..792911	+	88	15793784	-	NMA0811	-	hypothetical protein
738	 53.69	0	793120..794976	+	618	15793785	secD	NMA0812	-	preprotein translocase subunit SecD
739	 48.82	0	794980..795915	+	311	15793786	secF	NMA0813	-	preprotein translocase subunit SecF
740	 45.76	0	795923..796099	+	58	15793787	-	NMA0814	-	hypothetical protein
741	 54.81	0	796138..796407	+	89	15793788	rpsO	NMA0815	-	30S ribosomal protein S15
742	 50.13	0	796788..797912	+	374	15793789	-	NMA0816	-	polyamine permease ATP-binding protein
743	 49.07	0	797928..798893	+	321	15793790	-	NMA0817	-	polyamine permease inner membrane protein
744	 50.23	0	798893..799780	+	295	15793791	-	NMA0818	-	polyamine permease inner membrane protein
745	 51.08	0	799906..801201	+	431	15793792	-	NMA0819	-	oxidoreductase
746	 57.47	0	801446..802750	-	434	15793793	amtB	NMA0820	-	ammonium transporter
747	 59.90	+1	802770..802961	+	63	15793794	-	NMA0821	-	hypothetical protein
748	 61.44	+1	805021..805173	+	50	15793795	-	NMA0824	-	hypothetical protein
749	 54.37	0	805239..806498	-	419	15793796	rho	NMA0825	-	transcription termination factor Rho
750	 54.93	0	806718..809102	-	794	15793797	ppsA	NMA0826	-	phosphoenolpyruvate synthase
751	 53.28	0	809514..810335	+	273	15793798	-	NMA0827	-	hypothetical protein
752	 61.69	+1	810575..811237	-	220	15793799	-	NMA0828	-	phosphatase
753	 56.52	0	811250..812077	-	275	15793800	-	NMA0829	-	hypothetical protein
754	 56.41	0	812507..813130	+	207	15793801	-	NMA0830	-	periplasmic carrier protein
755	 55.44	0	813403..814542	+	379	15793802	-	NMA0831	-	polyamine permease substrate-binding protein
756	 31.34	-2	814675..815826	+	383	15793803	-	NMA0832	-	glycosyl transferase
757	 58.95	+1	815867..816397	+	176	15793804	-	NMA0833	-	hypothetical protein
758	 56.94	0	816581..816652	-	23	15793805	-	NMA0835	-	peptide chain release factor 3 remnant
759	 54.76	0	816773..818368	-	531	15793806	prfC	NMA0836	-	peptide chain release factor 3
760	 54.29	0	818475..818870	-	131	15793807	hisI	NMA0837	-	phosphoribosyl-AMP cyclohydrolase
761	 61.46	+1	818901..819668	-	255	15793808	hisF	NMA0838	-	imidazole glycerol phosphate synthase subunit HisF
762	 59.21	+1	819681..820418	-	245	15793809	hisA	NMA0839	-	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
763	 54.93	0	820451..821089	-	212	15793810	hisH	NMA0840	-	imidazole glycerol phosphate synthase subunit HisH
764	 59.61	+1	821220..822722	-	500	15793811	-	NMA0841	-	phosphate acyltransferase
765	 60.53	+1	822907..823965	-	352	15793812	fbpC	NMA0842	-	iron-uptake permease ATP-binding protein
766	 51.76	0	823986..825515	-	509	15793813	fbpB	NMA0843	-	iron-uptake permease inner membrane protein
767	 55.62	0	825571..826566	-	331	15793814	fbpA	NMA0844	-	major ferric iron binding protein
768	 47.30	0	826817..827038	-	73	15793815	-	NMA0845	-	hypothetical protein
769	 52.94	0	827032..827286	-	84	15793816	-	NMA0846	-	hypothetical protein
770	 57.30	0	827343..828719	-	458	15793817	argH	NMA0847	-	argininosuccinate lyase
771	 56.78	0	828738..829607	-	289	15793818	galU	NMA0848	-	UTP--glucose-1-phosphate uridylyltransferase
772	 55.67	0	829635..830234	-	199	15793819	-	NMA0849	-	putative deoxyribonucleotide triphosphate pyrophosphatase
773	 55.98	0	830227..830460	-	77	15793820	-	NMA0850	-	hypothetical protein
774	 53.37	0	830568..831101	-	177	15793821	ppa	NMA0851	-	inorganic pyrophosphatase
775	 56.86	0	831203..831661	-	152	15793822	ntpA	NMA0852	-	dATP pyrophosphohydrolase
776	 50.39	0	832260..833930	+	556	15793823	mafB3	NMA0853	-	adhesin
777	 25.51	-2	833927..834169	+	80	15793824	-	NMA0854	-	hypothetical protein
778	 41.87	-1	834247..834492	+	81	15793825	-	NMA0855	-	hypothetical protein
779	 37.18	-2	834495..834884	+	129	15793826	-	NMA0856	-	hypothetical protein
780	 32.89	-2	835000..835449	+	149	15793827	-	NMA0857	-	hypothetical protein
781	 30.77	-2	835597..835986	+	129	15793828	-	NMA0858	-	hypothetical protein
782	 59.12	+1	836027..837484	-	485	15793829	-	NMA0859	-	transmembrane potassium transporter
783	 57.52	0	837499..838329	-	276	15793830	apaH	NMA0860	-	diadenosine tetraphosphatase
784	 62.05	+1	838407..838796	-	129	15793831	-	NMA0861	-	hypothetical protein
785	 58.48	0	838932..839456	-	174	15793832	nspA	NMA0862	-	outer membrane protein
786	 55.50	0	840042..841241	-	399	15793833	-	NMA0864	-	coproporphyrinogen III oxidase
787	 58.16	0	841274..843799	-	841	15793834	ligA	NMA0865	-	DNA ligase
788	 56.33	0	843947..845233	-	428	15793835	-	NMA0866	-	hypothetical protein
789	 55.85	0	845427..845999	-	190	15793836	ampD	NMA0867	-	N-acetyl-anhydromuranmyl-L-alanine amidase
790	 54.32	0	846083..847078	+	331	15793837	-	NMA0868	-	periplasmic protein
791	 56.20	0	847138..847758	+	206	15793838	tdk	NMA0869	-	thymidylate kinase
792	 54.88	0	847980..849260	+	426	15793839	maeA	NMA0870	-	malate oxidoreductase
793	 49.33	0	849527..849676	+	49	15793840	-	NMA0871	-	hypothetical protein
794	 56.71	0	849807..850841	+	344	15793841	lpxK	NMA0872	-	tetraacyldisaccharide 4'-kinase
795	 47.96	0	851041..851628	+	195	15793842	-	NMA0873	-	periplasmic protein
796	 48.09	0	851697..851879	+	60	15793843	-	NMA0874	-	hypothetical protein
797	 59.97	+1	851876..852637	+	253	15793844	kdsB	NMA0875	-	3-deoxy-manno-octulosonate cytidylyltransferase
798	 50.50	0	852660..853061	+	133	15793845	-	NMA0876	-	hypothetical protein
799	 50.30	0	853115..853279	+	54	15793846	-	NMA0877	-	hypothetical protein
800	 34.19	-2	853257..853373	+	38	15793847	-	NMA0878	-	hypothetical protein
801	 53.82	0	853953..854738	+	261	15793848	trpA	NMA0879	-	tryptophan synthase subunit alpha
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.