IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
661	 56.52	0	725776..726849	-	357	15793708	-	NMA0732	-	integral membrane protein
662	 54.68	0	726897..727772	-	291	15793709	-	NMA0733	-	transposase
663	 53.21	0	727827..728777	-	316	15793710	-	NMA0734	-	IS1106A3 transposase
664	 41.07	-1	728808..728975	-	55	15793711	-	NMA0735	-	hypothetical protein
665	 51.74	0	729844..731772	-	642	15793712	dnaK	NMA0736	-	molecular chaperone DnaK
666	 44.69	0	731980..732252	-	90	15793713	-	NMA0737	-	hypothetical protein
667	 45.71	0	732438..733124	+	228	15793714	-	NMA0738	-	transcriptional regulator
668	 45.13	0	733256..733594	+	112	15793715	-	NMA0739	-	iron-sulfur cluster insertion protein ErpA
669	 49.46	0	733754..734218	+	154	15793716	-	NMA0740	-	hypothetical protein
670	 54.96	0	734253..735764	+	503	15793717	ubiB	NMA0741	-	putative ubiquinone biosynthesis protein UbiB
671	 56.78	0	736121..736939	-	272	15793718	cysE	NMA0742	-	serine acetyltransferase
672	 54.75	0	737123..737701	+	192	15793719	grpE	NMA0744	-	heat shock protein
673	 50.46	0	737825..738040	-	71	15793720	-	NMA0745	-	periplasmic protein
674	 52.65	0	738066..739121	-	351	15793721	apbE	NMA0746	-	thiamine biosynthesis protein
675	 53.37	0	739274..740491	-	405	15793722	nqrF	NMA0747	-	Na(+)-translocating NADH-quinone reductase subunit F
676	 50.67	0	740505..741098	-	197	15793723	nqrE	NMA0748	-	Na(+)-translocating NADH-quinone reductase subunit E
677	 53.11	0	741102..741728	-	208	15793724	nqrD	NMA0749	-	Na(+)-translocating NADH-quinone reductase subunit D
678	 53.15	0	741728..742504	-	258	15793725	nqrC	NMA0750	-	Na(+)-translocating NADH-quinone reductase subunit C
679	 54.10	0	742497..743729	-	410	15793726	nqrB	NMA0751	-	Na(+)-translocating NADH-quinone reductase subunit B
680	 54.17	0	743732..745075	-	447	15793727	nqrA	NMA0752	-	Na(+)-translocating NADH-quinone reductase subunit A
681	 53.73	0	745423..746844	-	473	15793728	-	NMA0753	-	membrane protein
682	 55.00	0	747202..747561	-	119	15793729	-	NMA0754	-	membrane protein
683	 49.83	0	747558..748163	-	201	15793730	-	NMA0755	-	hypothetical protein
684	 52.17	0	748210..748692	-	160	15793731	-	NMA0756	-	transcription regulator AsnC
685	 36.19	-2	748755..748859	+	34	15793732	-	NMA0757	-	hypothetical protein
686	 55.01	0	749198..750304	+	368	15793733	gcvT	NMA0758	-	glycine cleavage system aminomethyltransferase T
687	 55.30	0	750467..750853	+	128	15793734	gcvH	NMA0759	-	glycine cleavage system protein H
688	 53.53	0	751005..752252	+	415	15793735	hemA	NMA0760	-	glutamyl-tRNA reductase
689	 53.83	0	752579..753100	+	173	15793736	-	NMA0761	-	regulatory protein
690	 53.24	0	753154..754188	+	344	15793737	-	NMA0762	-	hypothetical protein
691	 58.06	0	754216..754866	+	216	15793738	-	NMA0763	-	ABC-transporter ATP-binding protein
692	 48.33	0	754968..755087	+	39	15793739	-	NMA0764	-	hypothetical protein
693	 51.92	0	755084..755578	+	164	15793740	-	NMA0765	-	lipoprotein
694	 53.98	0	755666..757423	-	585	15793741	-	NMA0766a	-	electron transfer flavoprotein-ubiquinone oxidoreductase
695	 52.52	0	757457..757873	-	138	15793742	-	NMA0767	-	hypothetical protein
696	 51.04	0	758873..759838	+	321	15793743	-	NMA0768	-	IS1655 transposase
697	 47.09	0	760370..761023	-	217	15793744	-	NMA0769	-	IS1016 transposase
698	 39.81	-1	761050..761265	-	71	15793745	-	NMA0770	-	hypothetical protein
699	 29.63	-2	761272..761406	-	44	15793746	-	NMA0771	-	hypothetical protein
700	 38.61	-1	761709..762674	-	321	15793747	-	NMA0772	-	DNA-invertase
701	 44.58	-1	762890..763138	+	82	15793748	-	NMA0773	-	hypothetical protein
702	 42.02	-1	763535..764593	-	352	15793749	-	NMA0774	-	hypothetical protein
703	 40.28	-1	764596..764883	-	95	15793750	-	NMA0775	-	integral membrane protein
704	 43.63	-1	764885..766399	-	504	15793751	-	NMA0776	-	cell-surface protein
705	 29.08	-2	766341..766646	-	101	15793752	-	NMA0777	-	hypothetical protein
706	 42.75	-1	766775..767050	-	91	15793753	-	NMA0778	-	hypothetical protein
707	 47.49	0	767061..767279	-	72	15793754	-	NMA0779	-	integral membrane protein
708	 38.73	-1	767362..767565	-	67	15793755	-	NMA0780	-	hypothetical protein
709	 49.04	0	767583..767894	-	103	15793756	-	NMA0781	-	hypothetical protein
710	 46.96	0	767915..769264	-	449	15793757	-	NMA0782	-	phage replication protein
711	 41.20	-1	769261..769476	-	71	15793758	-	NMA0783	-	hypothetical protein
712	 29.12	-2	769762..770283	+	173	15793759	-	NMA0784	-	hypothetical protein
713	 34.22	-2	770333..770782	+	149	15793760	-	NMA0785	-	hypothetical protein
714	 21.30	-2	770816..771322	+	168	15793761	-	NMA0786	-	hypothetical protein
715	 46.16	0	771339..772406	+	355	15793762	-	NMA0787	-	hypothetical protein
716	 53.29	0	774834..775760	-	308	15793763	-	NMA0789	-	periplasmic binding protein
717	 58.22	0	775837..776712	-	291	15793764	-	NMA0790	-	ABC-transporter membrane protein
718	 53.44	0	776748..777503	-	251	15793765	-	NMA0791	-	ABC-transporter ATP-binding protein
719	 52.73	0	777791..778156	-	121	15793766	rplS	NMA0792	-	50S ribosomal protein L19
720	 53.07	0	778172..778921	-	249	15793767	trmD	NMA0793	-	tRNA (guanine-N1)-methyltransferase
721	 49.61	0	778921..779430	-	169	15793768	rimM	NMA0794	-	16S rRNA-processing protein
722	 56.10	0	779446..779691	-	81	15793769	rpsP	NMA0795	-	30S ribosomal protein S16
723	 57.97	0	779736..782162	-	808	15793770	-	NMA0796	-	hypothetical protein
724	 53.73	0	782280..783686	-	468	15793771	-	NMA0797	-	two-component system sensor kinase
725	 56.64	0	783700..784377	-	225	15793772	-	NMA0798	-	two-component system regulator
726	 45.33	0	784374..784523	-	49	15793773	-	NMA0799	-	hypothetical protein
727	 56.03	0	784567..786381	-	604	15793774	-	NMA0800	-	hypothetical protein
728	 51.13	0	786371..786724	-	117	15793775	-	NMA0801	-	hypothetical protein
729	 52.31	0	786740..787345	-	201	15793776	-	NMA0802	-	hypothetical protein
730	 51.62	0	787398..788168	-	256	15793777	tatC	NMA0803	-	sec-independent protein translocase component
731	 56.04	0	788182..788868	-	228	15793778	-	NMA0804	-	sec-independent protein translocase component
732	 46.57	0	788872..789075	-	67	15793779	-	NMA0805	-	sec-independent protein translocase component
733	 51.54	0	789122..789445	-	107	15793780	-	NMA0806	-	nucleotide-binding protein
734	 50.62	0	789517..789840	-	107	15793781	hisE	NMA0807	-	phosphoribosyl-ATP cyclohydrolase
735	 55.59	0	789981..791045	-	354	15793782	-	NMA0808	-	zinc-binding alcohol dehydrogenase
736	 58.38	0	791408..792565	-	385	15793783	-	NMA0810	-	hypothetical protein
737	 46.82	0	792645..792911	+	88	15793784	-	NMA0811	-	hypothetical protein
738	 53.69	0	793120..794976	+	618	15793785	secD	NMA0812	-	preprotein translocase subunit SecD
739	 48.82	0	794980..795915	+	311	15793786	secF	NMA0813	-	preprotein translocase subunit SecF
740	 45.76	0	795923..796099	+	58	15793787	-	NMA0814	-	hypothetical protein
741	 54.81	0	796138..796407	+	89	15793788	rpsO	NMA0815	-	30S ribosomal protein S15
742	 50.13	0	796788..797912	+	374	15793789	-	NMA0816	-	polyamine permease ATP-binding protein
743	 49.07	0	797928..798893	+	321	15793790	-	NMA0817	-	polyamine permease inner membrane protein
744	 50.23	0	798893..799780	+	295	15793791	-	NMA0818	-	polyamine permease inner membrane protein
745	 51.08	0	799906..801201	+	431	15793792	-	NMA0819	-	oxidoreductase
746	 57.47	0	801446..802750	-	434	15793793	amtB	NMA0820	-	ammonium transporter
747	 59.90	+1	802770..802961	+	63	15793794	-	NMA0821	-	hypothetical protein
748	 61.44	+1	805021..805173	+	50	15793795	-	NMA0824	-	hypothetical protein
749	 54.37	0	805239..806498	-	419	15793796	rho	NMA0825	-	transcription termination factor Rho
750	 54.93	0	806718..809102	-	794	15793797	ppsA	NMA0826	-	phosphoenolpyruvate synthase
751	 53.28	0	809514..810335	+	273	15793798	-	NMA0827	-	hypothetical protein
752	 61.69	+1	810575..811237	-	220	15793799	-	NMA0828	-	phosphatase
753	 56.52	0	811250..812077	-	275	15793800	-	NMA0829	-	hypothetical protein
754	 56.41	0	812507..813130	+	207	15793801	-	NMA0830	-	periplasmic carrier protein
755	 55.44	0	813403..814542	+	379	15793802	-	NMA0831	-	polyamine permease substrate-binding protein
756	 31.34	-2	814675..815826	+	383	15793803	-	NMA0832	-	glycosyl transferase
757	 58.95	+1	815867..816397	+	176	15793804	-	NMA0833	-	hypothetical protein
758	 56.94	0	816581..816652	-	23	15793805	-	NMA0835	-	peptide chain release factor 3 remnant
759	 54.76	0	816773..818368	-	531	15793806	prfC	NMA0836	-	peptide chain release factor 3
760	 54.29	0	818475..818870	-	131	15793807	hisI	NMA0837	-	phosphoribosyl-AMP cyclohydrolase
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.