IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
586	 59.54	+1	632755..633834	-	359	15793633	aroB	NMA0647	-	3-dehydroquinate synthase
587	 57.31	0	633914..634426	-	170	15793634	aroK	NMA0648	-	shikimate kinase
588	 52.67	0	635588..637873	-	761	15793635	pilQ	NMA0650	-	pilus secretin
589	 49.82	0	637892..638437	-	181	15793636	pilP	NMA0651	-	pilus assembly protein
590	 51.08	0	638455..639102	-	215	15793637	pilO	NMA0652	-	pilus assembly protein
591	 50.50	0	639103..639702	-	199	15793638	pilN	NMA0653	-	pilus assembly protein
592	 47.85	0	639705..640820	-	371	15793639	pilM	NMA0654	-	pilus assembly protein
593	 51.52	0	640972..643368	+	798	15793640	ponA	NMA0655	-	penicillin-binding protein 1
594	 49.52	0	643489..644118	-	209	15793641	-	NMA0656	-	GTPase EngB
595	 50.64	0	644324..644947	+	207	15793642	cyc	NMA0658	-	cytochrome C
596	 49.67	0	645224..647176	+	650	15793643	-	NMA0659	-	membrane protein
597	 52.53	0	647169..648356	+	395	15793644	-	NMA0660	-	membrane protein
598	 58.40	0	648473..649537	+	354	15793645	gcp	NMA0661	-	O-sialoglycoprotein endopeptidase
599	 54.74	0	649581..650477	-	298	15793646	-	NMA0662	-	lipid A biosynthesis lauroyl acyltransferase
600	 56.58	0	650823..651992	+	389	15793647	metK	NMA0663	-	S-adenosylmethionine synthetase
601	 40.40	-1	652241..652693	+	150	15793648	-	NMA0664	-	IS1016 transposase
602	 37.50	-2	652692..652883	+	63	15793649	-	NMA0664a	-	IS1016 transposase
603	 56.52	0	652959..654368	-	469	15793650	-	NMA0665	-	peptidase
604	 50.26	0	654533..655099	+	188	15793651	-	NMA0666	-	oxidoreductase
605	 52.89	0	655668..656981	+	437	15793652	-	NMA0668	-	transmembrane transport protein
606	 56.83	0	657370..658620	+	416	15793653	-	NMA0670	-	two-component system sensor kinase
607	 49.40	0	658677..658844	+	55	15793654	-	NMA0671	-	hypothetical protein
608	 56.69	0	658879..660372	-	497	15793655	-	NMA0672	-	hypothetical protein
609	 58.53	0	660586..660843	+	85	15793656	-	NMA0673	-	glutaredoxin
610	 55.18	0	660864..661307	+	147	15793657	secB	NMA0674	-	preprotein translocase subunit SecB
611	 58.64	0	661393..663435	+	680	15793658	recG	NMA0675	-	DNA helicase
612	 62.26	+1	664694..665737	-	347	15793659	argC	NMA0676	-	N-acetyl-gamma-glutamyl-phosphate reductase
613	 54.08	0	665734..666027	-	97	15793660	-	NMA0677	-	hypothetical protein
614	 42.06	-1	666395..666715	+	106	15793661	-	NMA0678	-	hypothetical protein
615	 45.06	0	666734..667543	+	269	15793662	-	NMA0679a	-	hypothetical protein
616	 26.32	-2	667552..667779	+	75	15793663	-	NMA0680	-	lipoprotein
617	 43.79	-1	667772..668125	+	117	15793664	-	NMA0681	-	hypothetical protein
618	 44.88	0	670145..670447	+	100	15793665	-	NMA0684	-	hypothetical protein
619	 32.75	-2	670462..670632	+	56	15793666	-	NMA0685	-	hypothetical protein
620	 46.59	0	671031..672773	+	580	15793667	-	NMA0687	-	periplasmic protein
621	 47.69	0	672883..678930	+	2015	15793668	-	NMA0688	-	hypothetical protein
622	 25.52	-2	678935..679318	+	127	15793669	-	NMA0689	-	hypothetical protein
623	 46.46	0	679568..682249	+	893	15793670	-	NMA0690	-	hypothetical protein
624	 25.93	-2	682265..682696	+	143	15793671	-	NMA0691	-	hypothetical protein
625	 50.64	0	682841..685342	+	833	15793672	-	NMA0692	-	hypothetical protein
626	 30.47	-2	685339..685827	+	162	15793673	-	NMA0693	-	hypothetical protein
627	 32.23	-2	686015..686287	+	90	15793674	-	NMA0694	-	hypothetical protein
628	 43.55	-1	686491..687459	+	322	15793675	-	NMA0695	-	hypothetical protein
629	 44.66	-1	687462..688397	+	311	15793676	-	NMA0696	-	hypothetical protein
630	 41.60	-1	688810..689160	+	116	15793677	-	NMA0696A	-	hypothetical protein
631	 17.78	-2	689167..689346	+	59	15793678	-	NMA0697	-	hypothetical protein
632	 27.02	-2	689728..690186	+	152	15793679	-	NMA0698	-	periplasmic protein
633	 56.56	0	690700..691926	-	408	15793680	rbn	NMA0700	-	fused ribonuclease BN/uncharacterized domain-containing protein
634	 55.91	0	692470..693129	+	219	15793681	-	NMA0702	-	hypothetical protein
635	 57.42	0	693157..693675	+	172	15793682	-	NMA0703	-	hypothetical protein
636	 53.90	0	693682..694104	+	140	15793683	-	NMA0704	-	hypothetical protein
637	 55.91	0	694373..694744	+	123	15793684	-	NMA0706	-	membrane protein
638	 54.62	0	694741..695379	+	212	15793685	-	NMA0707	-	hypothetical protein
639	 58.56	0	696057..697142	-	361	15793686	-	NMA0708	-	beta-hexosaminidase
640	 56.15	0	697199..698719	-	506	15793687	-	NMA0709	-	integral membrane protein
641	 56.80	0	698921..700420	-	499	15793688	-	NMA0710	-	periplasmic serine protease
642	 54.13	0	700558..701187	-	209	15793689	nth	NMA0711	-	endonuclease III
643	 60.63	+1	701233..701646	-	137	15793690	-	NMA0712	-	membrane protein
644	 53.10	0	702236..703459	+	407	15793691	-	NMA0714	-	transmembrane hexose transporter
645	 54.49	0	703750..705129	+	459	15793692	-	NMA0715	-	transmembrane transport protein
646	 53.82	0	705258..706082	-	274	15793693	-	NMA0716	-	hypothetical protein
647	 53.88	0	706084..706599	-	171	15793694	-	NMA0717	-	hypothetical protein
648	 55.66	0	706718..707653	+	311	15793695	hemC	NMA0718	-	porphobilinogen deaminase
649	 51.68	0	708160..709353	-	397	15793696	aspC	NMA0719	-	aromatic amino acid aminotransferase
650	 57.03	0	709435..709932	-	165	15793697	-	NMA0720	-	hypothetical protein
651	 55.88	0	710048..710251	+	67	15793698	-	NMA0721	-	hypothetical protein
652	 54.06	0	710419..712005	-	528	15793699	-	NMA0722	-	transmembrane transport protein
653	 54.77	0	712274..712996	-	240	15793700	-	NMA0723	-	UDP-2,3-diacylglucosamine hydrolase
654	 58.89	+1	713245..716730	+	1161	15793701	-	NMA0724	-	hypothetical protein
655	 56.96	0	717081..718121	-	346	15793702	adhA	NMA0725	-	alcohol dehydrogenase
656	 54.36	0	718410..718799	-	129	15793703	-	NMA0726	-	pilin
657	 55.56	0	719025..720203	+	392	15793704	-	NMA0728	-	periplasmic protein
658	 55.04	0	720269..722203	+	644	15793705	-	NMA0729	-	ABC transporter ATP-binding protein
659	 55.68	0	722619..723401	-	260	15793706	-	NMA0730	-	thiol:disulphide interchange protein
660	 60.23	+1	723540..725729	+	729	15793707	priA	NMA0731	-	primosome assembly protein PriA
661	 56.52	0	725776..726849	-	357	15793708	-	NMA0732	-	integral membrane protein
662	 54.68	0	726897..727772	-	291	15793709	-	NMA0733	-	transposase
663	 53.21	0	727827..728777	-	316	15793710	-	NMA0734	-	IS1106A3 transposase
664	 41.07	-1	728808..728975	-	55	15793711	-	NMA0735	-	hypothetical protein
665	 51.74	0	729844..731772	-	642	15793712	dnaK	NMA0736	-	molecular chaperone DnaK
666	 44.69	0	731980..732252	-	90	15793713	-	NMA0737	-	hypothetical protein
667	 45.71	0	732438..733124	+	228	15793714	-	NMA0738	-	transcriptional regulator
668	 45.13	0	733256..733594	+	112	15793715	-	NMA0739	-	iron-sulfur cluster insertion protein ErpA
669	 49.46	0	733754..734218	+	154	15793716	-	NMA0740	-	hypothetical protein
670	 54.96	0	734253..735764	+	503	15793717	ubiB	NMA0741	-	putative ubiquinone biosynthesis protein UbiB
671	 56.78	0	736121..736939	-	272	15793718	cysE	NMA0742	-	serine acetyltransferase
672	 54.75	0	737123..737701	+	192	15793719	grpE	NMA0744	-	heat shock protein
673	 50.46	0	737825..738040	-	71	15793720	-	NMA0745	-	periplasmic protein
674	 52.65	0	738066..739121	-	351	15793721	apbE	NMA0746	-	thiamine biosynthesis protein
675	 53.37	0	739274..740491	-	405	15793722	nqrF	NMA0747	-	Na(+)-translocating NADH-quinone reductase subunit F
676	 50.67	0	740505..741098	-	197	15793723	nqrE	NMA0748	-	Na(+)-translocating NADH-quinone reductase subunit E
677	 53.11	0	741102..741728	-	208	15793724	nqrD	NMA0749	-	Na(+)-translocating NADH-quinone reductase subunit D
678	 53.15	0	741728..742504	-	258	15793725	nqrC	NMA0750	-	Na(+)-translocating NADH-quinone reductase subunit C
679	 54.10	0	742497..743729	-	410	15793726	nqrB	NMA0751	-	Na(+)-translocating NADH-quinone reductase subunit B
680	 54.17	0	743732..745075	-	447	15793727	nqrA	NMA0752	-	Na(+)-translocating NADH-quinone reductase subunit A
681	 53.73	0	745423..746844	-	473	15793728	-	NMA0753	-	membrane protein
682	 55.00	0	747202..747561	-	119	15793729	-	NMA0754	-	membrane protein
683	 49.83	0	747558..748163	-	201	15793730	-	NMA0755	-	hypothetical protein
684	 52.17	0	748210..748692	-	160	15793731	-	NMA0756	-	transcription regulator AsnC
685	 36.19	-2	748755..748859	+	34	15793732	-	NMA0757	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.