IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
552	 51.03	0	583916..587029	-	1037	15793599	pilC1	NMA0609	-	pilus-associated protein
553	 59.26	+1	587168..587356	-	62	15793600	-	NMA0610	-	hypothetical protein
554	 58.33	0	587959..589086	-	375	15793601	-	NMA0611	-	hypothetical protein
555	 56.47	0	589403..589912	+	169	15793602	-	NMA0612	-	periplasmic thioredoxin
556	 51.47	0	590256..590696	+	146	15793603	-	NMA0613	-	MarR family transcriptional regulator
557	 55.49	0	590811..591311	+	166	15793604	-	NMA0614	-	NADH:FMN oxidoreductase
558	 59.63	+1	591329..592024	+	231	15793605	-	NMA0615	-	sugar-phosphate nucleotidyl transferase
559	 54.86	0	592270..592701	-	143	15793606	-	NMA0616	-	integral membrane protein
560	 55.46	0	592876..594552	+	558	15793607	fhs	NMA0617	-	formate--tetrahydrofolate ligase
561	 55.77	0	594667..595758	+	363	15793608	-	NMA0618	-	translation-associated GTPase
562	 53.02	0	596020..597888	+	622	15793609	-	NMA0619	-	lipopolysaccharide modification acyltransferase
563	 55.86	0	597950..599245	+	431	15793610	tyrS	NMA0620	-	tyrosyl-tRNA synthetase
564	 56.74	0	599508..600464	+	318	15793611	ribF	NMA0621	-	bifunctional riboflavin kinase/FMN adenylyltransferase
565	 55.16	0	600606..603395	+	929	15793612	ileS	NMA0622	-	isoleucyl-tRNA synthetase
566	 51.20	0	604582..605079	+	165	15793613	lspA	NMA0623	-	lipoprotein signal peptidase
567	 56.66	0	605108..606076	+	322	15793614	ispH	NMA0624	-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase
568	 60.62	+1	606164..606643	-	159	15793615	-	NMA0625	-	phosphatase
569	 44.34	-1	609568..609894	-	108	15793616	-	NMA0629	-	hypothetical protein
570	 49.40	0	609887..610801	-	304	15793617	-	NMA0630	-	hypothetical protein
571	 48.88	0	610868..614116	-	1082	15793618	-	NMA0631	-	hypothetical protein
572	 57.00	0	614394..617828	-	1144	15793619	dnaE	NMA0632	-	DNA polymerase III, alpha subunit
573	 47.46	0	618069..618245	-	58	15793620	-	NMA0632a	-	hypothetical protein
574	 54.70	0	618360..618593	+	77	15793621	-	NMA0633	-	hypothetical protein
575	 58.80	0	618565..618780	+	71	15793622	-	NMA0634	-	hypothetical protein
576	 60.33	+1	619076..619912	+	278	15793623	-	NMA0635	-	hypothetical protein
577	 57.08	0	619964..621256	-	430	15793624	avtA	NMA0636	-	valine--pyruvate transaminase
578	 56.78	0	621312..623222	-	636	15793625	pglD	NMA0637	-	pilin glycosylation protein
579	 55.64	0	623270..624484	-	404	15793626	pglC	NMA0638a	-	pilin glycosylation protein
580	 57.73	0	624523..625764	-	413	15793627	pglB	NMA0639	-	pilin glycosylation protein
581	 53.69	0	625757..626920	-	387	15793628	-	NMA0640	-	hypothetical protein
582	 60.55	+1	628018..629439	-	473	15793629	-	NMA0643	-	lipopolysaccharide biosynthesis translocase
583	 59.64	+1	629634..630743	-	369	15793630	ribD	NMA0644	-	diaminohydroxyphosphoribosylaminopyrimidine deaminase/phosphoribosylamino)uracil reductase
584	 61.94	+1	630775..631239	-	154	15793631	-	NMA0645	-	transcriptional regulator NrdR
585	 58.24	0	631269..632111	-	280	15793632	-	NMA0646	-	hypothetical protein
586	 59.54	+1	632755..633834	-	359	15793633	aroB	NMA0647	-	3-dehydroquinate synthase
587	 57.31	0	633914..634426	-	170	15793634	aroK	NMA0648	-	shikimate kinase
588	 52.67	0	635588..637873	-	761	15793635	pilQ	NMA0650	-	pilus secretin
589	 49.82	0	637892..638437	-	181	15793636	pilP	NMA0651	-	pilus assembly protein
590	 51.08	0	638455..639102	-	215	15793637	pilO	NMA0652	-	pilus assembly protein
591	 50.50	0	639103..639702	-	199	15793638	pilN	NMA0653	-	pilus assembly protein
592	 47.85	0	639705..640820	-	371	15793639	pilM	NMA0654	-	pilus assembly protein
593	 51.52	0	640972..643368	+	798	15793640	ponA	NMA0655	-	penicillin-binding protein 1
594	 49.52	0	643489..644118	-	209	15793641	-	NMA0656	-	GTPase EngB
595	 50.64	0	644324..644947	+	207	15793642	cyc	NMA0658	-	cytochrome C
596	 49.67	0	645224..647176	+	650	15793643	-	NMA0659	-	membrane protein
597	 52.53	0	647169..648356	+	395	15793644	-	NMA0660	-	membrane protein
598	 58.40	0	648473..649537	+	354	15793645	gcp	NMA0661	-	O-sialoglycoprotein endopeptidase
599	 54.74	0	649581..650477	-	298	15793646	-	NMA0662	-	lipid A biosynthesis lauroyl acyltransferase
600	 56.58	0	650823..651992	+	389	15793647	metK	NMA0663	-	S-adenosylmethionine synthetase
601	 40.40	-1	652241..652693	+	150	15793648	-	NMA0664	-	IS1016 transposase
602	 37.50	-2	652692..652883	+	63	15793649	-	NMA0664a	-	IS1016 transposase
603	 56.52	0	652959..654368	-	469	15793650	-	NMA0665	-	peptidase
604	 50.26	0	654533..655099	+	188	15793651	-	NMA0666	-	oxidoreductase
605	 52.89	0	655668..656981	+	437	15793652	-	NMA0668	-	transmembrane transport protein
606	 56.83	0	657370..658620	+	416	15793653	-	NMA0670	-	two-component system sensor kinase
607	 49.40	0	658677..658844	+	55	15793654	-	NMA0671	-	hypothetical protein
608	 56.69	0	658879..660372	-	497	15793655	-	NMA0672	-	hypothetical protein
609	 58.53	0	660586..660843	+	85	15793656	-	NMA0673	-	glutaredoxin
610	 55.18	0	660864..661307	+	147	15793657	secB	NMA0674	-	preprotein translocase subunit SecB
611	 58.64	0	661393..663435	+	680	15793658	recG	NMA0675	-	DNA helicase
612	 62.26	+1	664694..665737	-	347	15793659	argC	NMA0676	-	N-acetyl-gamma-glutamyl-phosphate reductase
613	 54.08	0	665734..666027	-	97	15793660	-	NMA0677	-	hypothetical protein
614	 42.06	-1	666395..666715	+	106	15793661	-	NMA0678	-	hypothetical protein
615	 45.06	0	666734..667543	+	269	15793662	-	NMA0679a	-	hypothetical protein
616	 26.32	-2	667552..667779	+	75	15793663	-	NMA0680	-	lipoprotein
617	 43.79	-1	667772..668125	+	117	15793664	-	NMA0681	-	hypothetical protein
618	 44.88	0	670145..670447	+	100	15793665	-	NMA0684	-	hypothetical protein
619	 32.75	-2	670462..670632	+	56	15793666	-	NMA0685	-	hypothetical protein
620	 46.59	0	671031..672773	+	580	15793667	-	NMA0687	-	periplasmic protein
621	 47.69	0	672883..678930	+	2015	15793668	-	NMA0688	-	hypothetical protein
622	 25.52	-2	678935..679318	+	127	15793669	-	NMA0689	-	hypothetical protein
623	 46.46	0	679568..682249	+	893	15793670	-	NMA0690	-	hypothetical protein
624	 25.93	-2	682265..682696	+	143	15793671	-	NMA0691	-	hypothetical protein
625	 50.64	0	682841..685342	+	833	15793672	-	NMA0692	-	hypothetical protein
626	 30.47	-2	685339..685827	+	162	15793673	-	NMA0693	-	hypothetical protein
627	 32.23	-2	686015..686287	+	90	15793674	-	NMA0694	-	hypothetical protein
628	 43.55	-1	686491..687459	+	322	15793675	-	NMA0695	-	hypothetical protein
629	 44.66	-1	687462..688397	+	311	15793676	-	NMA0696	-	hypothetical protein
630	 41.60	-1	688810..689160	+	116	15793677	-	NMA0696A	-	hypothetical protein
631	 17.78	-2	689167..689346	+	59	15793678	-	NMA0697	-	hypothetical protein
632	 27.02	-2	689728..690186	+	152	15793679	-	NMA0698	-	periplasmic protein
633	 56.56	0	690700..691926	-	408	15793680	rbn	NMA0700	-	fused ribonuclease BN/uncharacterized domain-containing protein
634	 55.91	0	692470..693129	+	219	15793681	-	NMA0702	-	hypothetical protein
635	 57.42	0	693157..693675	+	172	15793682	-	NMA0703	-	hypothetical protein
636	 53.90	0	693682..694104	+	140	15793683	-	NMA0704	-	hypothetical protein
637	 55.91	0	694373..694744	+	123	15793684	-	NMA0706	-	membrane protein
638	 54.62	0	694741..695379	+	212	15793685	-	NMA0707	-	hypothetical protein
639	 58.56	0	696057..697142	-	361	15793686	-	NMA0708	-	beta-hexosaminidase
640	 56.15	0	697199..698719	-	506	15793687	-	NMA0709	-	integral membrane protein
641	 56.80	0	698921..700420	-	499	15793688	-	NMA0710	-	periplasmic serine protease
642	 54.13	0	700558..701187	-	209	15793689	nth	NMA0711	-	endonuclease III
643	 60.63	+1	701233..701646	-	137	15793690	-	NMA0712	-	membrane protein
644	 53.10	0	702236..703459	+	407	15793691	-	NMA0714	-	transmembrane hexose transporter
645	 54.49	0	703750..705129	+	459	15793692	-	NMA0715	-	transmembrane transport protein
646	 53.82	0	705258..706082	-	274	15793693	-	NMA0716	-	hypothetical protein
647	 53.88	0	706084..706599	-	171	15793694	-	NMA0717	-	hypothetical protein
648	 55.66	0	706718..707653	+	311	15793695	hemC	NMA0718	-	porphobilinogen deaminase
649	 51.68	0	708160..709353	-	397	15793696	aspC	NMA0719	-	aromatic amino acid aminotransferase
650	 57.03	0	709435..709932	-	165	15793697	-	NMA0720	-	hypothetical protein
651	 55.88	0	710048..710251	+	67	15793698	-	NMA0721	-	hypothetical protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.