IslandPath Analysis: Neisseria meningitidis Z2491



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 51.77   STD DEV: 7.09
Neisseria meningitidis Z2491, complete genome - 1..2184406
2049 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
491	 57.22	0	522409..522588	-	59	15793538	rpmF	NMA0544	-	50S ribosomal protein L32
492	 50.99	0	522622..523125	-	167	15793539	-	NMA0545	-	hypothetical protein
493	 55.33	0	523273..523863	+	196	15793540	maf	NMA0546	-	Maf-like protein
494	 51.93	0	523910..524635	+	241	15793541	-	NMA0547	-	hypothetical protein
495	 54.95	0	524716..526353	-	545	15793542	-	NMA0548	-	putative inner membrane protein translocase component YidC
496	 56.36	0	526525..526815	-	96	15793543	-	NMA0549	-	hypothetical protein
497	 55.46	0	526812..527177	-	121	15793544	rnpA	NMA0550	-	ribonuclease P
498	 61.48	+1	527180..527314	-	44	15793545	rpmH	NMA0551	-	50S ribosomal protein L34
499	 55.23	0	527602..529158	+	518	15793546	dnaA	NMA0552	-	chromosomal replication initiator protein
500	 55.89	0	529238..530341	+	367	15793547	dnaN	NMA0553	-	DNA polymerase III subunit beta
501	 47.14	0	530526..531119	-	197	15793548	-	NMA0554	-	IS1016 transposase
502	 60.11	+1	531352..533409	-	685	15793549	ppk	NMA0555	-	polyphosphate kinase
503	 52.93	0	533578..534021	-	147	15793550	-	NMA0556	-	periplasmic protein
504	 54.46	0	534028..534543	-	171	15793551	mlp	NMA0557	-	lipoprotein
505	 55.73	0	534813..537545	+	910	15793552	leuS	NMA0559	-	leucyl-tRNA synthetase
506	 42.17	-1	537775..538566	+	263	15793553	drg	NMA0560	-	type II restriction endonuclease
507	 46.15	0	538898..539779	+	293	15793554	-	NMA0562	-	hypothetical protein
508	 50.00	0	540060..540155	-	31	15793555	-	NMA0563	-	hypothetical protein
509	 51.92	0	540161..540472	-	103	15793556	-	NMA0564	-	DNA-binding protein
510	 48.51	0	540469..540837	-	122	15793557	-	NMA0565	-	hypothetical protein
511	 38.10	-1	541086..541232	+	48	15793558	-	NMA0567	-	hypothetical protein
512	 50.00	0	541335..541538	+	67	15793559	-	NMA0568	-	hypothetical protein
513	 51.57	0	541736..542086	-	116	15793560	secG	NMA0569	-	preprotein translocase subunit SecG
514	 56.61	0	542093..542848	-	251	15793561	tpiA	NMA0570	-	triosephosphate isomerase
515	 56.63	0	543026..543553	+	175	15793562	-	NMA0571	-	hypothetical protein
516	 52.97	0	543655..544311	+	218	15793563	-	NMA0572	-	protein-L-isoaspartate O-methyltransferase
517	 55.56	0	544391..544714	+	107	15793564	-	NMA0573	-	hypothetical protein
518	 49.79	0	544723..544959	-	78	15793565	-	NMA0574	-	hypothetical protein
519	 62.49	+1	545129..547306	-	725	15793566	-	NMA0575	-	ferric siderophore receptor protein
520	 58.64	0	547420..547743	-	107	15793567	-	NMA0576	-	hypothetical protein
521	 60.97	+1	548781..549746	-	321	15793568	fetB2	NMA0577	-	ferric enterobactin transporter binding protein
522	 61.96	+1	549982..550938	+	318	15793569	-	NMA0578	-	AraC family transcription regulator
523	 56.94	0	551052..553067	-	671	15793570	-	NMA0579	-	prolyl endopeptidase
524	 62.93	+1	553268..554578	-	436	15793571	argA	NMA0580	-	N-acetylglutamate synthase
525	 56.78	0	554575..555009	-	144	15793572	-	NMA0581	-	hypothetical protein
526	 55.45	0	555083..555724	-	213	15793573	pyrE	NMA0582	-	orotate phosphoribosyltransferase
527	 62.06	+1	555786..556523	-	245	15793574	-	NMA0583	-	hypothetical protein
528	 58.73	0	556517..556957	-	146	15793575	-	NMA0584	-	acetyltransferase
529	 62.24	+1	556954..557631	-	225	15793576	-	NMA0585	-	hypothetical protein
530	 54.09	0	557771..558613	-	280	15793577	-	NMA0586	-	lipoprotein
531	 56.15	0	558939..560003	-	354	15793578	fba	NMA0587	-	fructose-1,6-bisphosphate aldolase
532	 61.87	+1	560197..561114	+	305	15793579	xerC	NMA0588	-	integrase/recombinase
533	 58.52	0	561199..563112	+	637	15793580	dxs	NMA0589	-	1-deoxy-D-xylulose-5-phosphate synthase
534	 56.28	0	563197..564525	-	442	15793581	-	NMA0590	-	hypothetical protein
535	 50.00	0	564983..565294	+	103	15793582	-	NMA0591	-	hypothetical protein
536	 58.26	0	565358..566641	+	427	15793583	hemL	NMA0592	-	glutamate-1-semialdehyde aminotransferase
537	 52.13	0	567140..567703	-	187	15793584	orn	NMA0594	-	oligoribonuclease
538	 59.57	+1	567721..568608	-	295	15793585	prmA	NMA0595	-	ribosomal protein L11 methyltransferase
539	 57.05	0	568869..570230	-	453	15793586	accC	NMA0596	-	acetyl-CoA carboxylase biotin carboxylase component
540	 57.89	0	570343..570798	-	151	15793587	accB	NMA0597	-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
541	 50.31	0	570822..570980	+	52	15793588	-	NMA0598	-	hypothetical protein
542	 58.60	0	571154..572194	+	346	15793589	queA	NMA0599	-	S-adenosylmethionine:tRNA ribosyltransferase-isomerase
543	 47.15	0	572565..573143	-	192	15793590	-	NMA0600	-	hypothetical protein
544	 51.78	0	573382..574281	+	299	15793591	-	NMA0601	-	LysR family transcriptional regulator
545	 56.78	0	574508..577723	-	1071	15793592	carB	NMA0602	-	carbamoyl phosphate synthase large subunit
546	 30.60	-2	577730..578278	-	182	15793593	-	NMA0603	-	hypothetical protein
547	 30.32	-2	578281..578844	-	187	15793594	-	NMA0604	-	hypothetical protein
548	 52.82	0	579695..580084	-	129	15793595	-	NMA0605	-	hypothetical protein
549	 43.33	-1	580081..580260	-	59	15793596	-	NMA0606	-	hypothetical protein
550	 44.20	-1	580363..580500	-	45	15793597	-	NMA0607	-	hypothetical protein
551	 57.41	0	580546..581679	-	377	15793598	carA	NMA0608	-	carbamoyl phosphate synthase small subunit
552	 51.03	0	583916..587029	-	1037	15793599	pilC1	NMA0609	-	pilus-associated protein
553	 59.26	+1	587168..587356	-	62	15793600	-	NMA0610	-	hypothetical protein
554	 58.33	0	587959..589086	-	375	15793601	-	NMA0611	-	hypothetical protein
555	 56.47	0	589403..589912	+	169	15793602	-	NMA0612	-	periplasmic thioredoxin
556	 51.47	0	590256..590696	+	146	15793603	-	NMA0613	-	MarR family transcriptional regulator
557	 55.49	0	590811..591311	+	166	15793604	-	NMA0614	-	NADH:FMN oxidoreductase
558	 59.63	+1	591329..592024	+	231	15793605	-	NMA0615	-	sugar-phosphate nucleotidyl transferase
559	 54.86	0	592270..592701	-	143	15793606	-	NMA0616	-	integral membrane protein
560	 55.46	0	592876..594552	+	558	15793607	fhs	NMA0617	-	formate--tetrahydrofolate ligase
561	 55.77	0	594667..595758	+	363	15793608	-	NMA0618	-	translation-associated GTPase
562	 53.02	0	596020..597888	+	622	15793609	-	NMA0619	-	lipopolysaccharide modification acyltransferase
563	 55.86	0	597950..599245	+	431	15793610	tyrS	NMA0620	-	tyrosyl-tRNA synthetase
564	 56.74	0	599508..600464	+	318	15793611	ribF	NMA0621	-	bifunctional riboflavin kinase/FMN adenylyltransferase
565	 55.16	0	600606..603395	+	929	15793612	ileS	NMA0622	-	isoleucyl-tRNA synthetase
566	 51.20	0	604582..605079	+	165	15793613	lspA	NMA0623	-	lipoprotein signal peptidase
567	 56.66	0	605108..606076	+	322	15793614	ispH	NMA0624	-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase
568	 60.62	+1	606164..606643	-	159	15793615	-	NMA0625	-	phosphatase
569	 44.34	-1	609568..609894	-	108	15793616	-	NMA0629	-	hypothetical protein
570	 49.40	0	609887..610801	-	304	15793617	-	NMA0630	-	hypothetical protein
571	 48.88	0	610868..614116	-	1082	15793618	-	NMA0631	-	hypothetical protein
572	 57.00	0	614394..617828	-	1144	15793619	dnaE	NMA0632	-	DNA polymerase III, alpha subunit
573	 47.46	0	618069..618245	-	58	15793620	-	NMA0632a	-	hypothetical protein
574	 54.70	0	618360..618593	+	77	15793621	-	NMA0633	-	hypothetical protein
575	 58.80	0	618565..618780	+	71	15793622	-	NMA0634	-	hypothetical protein
576	 60.33	+1	619076..619912	+	278	15793623	-	NMA0635	-	hypothetical protein
577	 57.08	0	619964..621256	-	430	15793624	avtA	NMA0636	-	valine--pyruvate transaminase
578	 56.78	0	621312..623222	-	636	15793625	pglD	NMA0637	-	pilin glycosylation protein
579	 55.64	0	623270..624484	-	404	15793626	pglC	NMA0638a	-	pilin glycosylation protein
580	 57.73	0	624523..625764	-	413	15793627	pglB	NMA0639	-	pilin glycosylation protein
581	 53.69	0	625757..626920	-	387	15793628	-	NMA0640	-	hypothetical protein
582	 60.55	+1	628018..629439	-	473	15793629	-	NMA0643	-	lipopolysaccharide biosynthesis translocase
583	 59.64	+1	629634..630743	-	369	15793630	ribD	NMA0644	-	diaminohydroxyphosphoribosylaminopyrimidine deaminase/phosphoribosylamino)uracil reductase
584	 61.94	+1	630775..631239	-	154	15793631	-	NMA0645	-	transcriptional regulator NrdR
585	 58.24	0	631269..632111	-	280	15793632	-	NMA0646	-	hypothetical protein
586	 59.54	+1	632755..633834	-	359	15793633	aroB	NMA0647	-	3-dehydroquinate synthase
587	 57.31	0	633914..634426	-	170	15793634	aroK	NMA0648	-	shikimate kinase
588	 52.67	0	635588..637873	-	761	15793635	pilQ	NMA0650	-	pilus secretin
589	 49.82	0	637892..638437	-	181	15793636	pilP	NMA0651	-	pilus assembly protein
590	 51.08	0	638455..639102	-	215	15793637	pilO	NMA0652	-	pilus assembly protein
51.77	MEAN

7.09	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.